EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000011997 (Gene tree)
Gene ID: 102023559
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 145423 bases
Position: chrJH721918.1:4981968-5127390
Accession: 102023559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000017468	R3H	PF01424.22	2.2e-10	1	1
ENSCLAP00000017466	R3H	PF01424.22	2.2e-10	1	1
ENSCLAP00000017469	R3H	PF01424.22	2.2e-10	1	1
ENSCLAP00000017467	R3H	PF01424.22	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000017637	R3HDM2-203	3084	XM_013520855	ENSCLAP00000017467	1027 (aa)	XP_013376309	-
ENSCLAT00000017636	R3HDM2-202	3138	XM_005397354	ENSCLAP00000017466	1045 (aa)	XP_005397411	UPI00038EC394
ENSCLAT00000017635	R3HDM2-201	4175	-	ENSCLAP00000017465	27 (aa)	-	-
ENSCLAT00000017639	R3HDM2-205	2982	XM_013520861	ENSCLAP00000017469	993 (aa)	XP_013376315	UPI00038ED446
ENSCLAT00000017638	R3HDM2-204	3042	XM_013520857	ENSCLAP00000017468	1013 (aa)	XP_013376311	UPI00038EA632

Gene Model

Click here to download ENSCLAG00000011997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000011997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000011997	R3HDM2	94	56.968	ENSCLAG00000007962	R3HDM1	80	68.803
ENSCLAG00000011997	R3HDM2	61	54.545	ENSCLAG00000007764	ARPP21	85	57.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000011997	R3HDM2	100	96.073	ENSG00000179912	R3HDM2	100	96.552	Homo_sapiens
ENSCLAG00000011997	R3HDM2	62	37.216	ENSAPOG00000021873	-	83	35.385	Acanthochromis_polyacanthus
ENSCLAG00000011997	R3HDM2	99	66.113	ENSAPOG00000020341	r3hdm2	96	68.012	Acanthochromis_polyacanthus
ENSCLAG00000011997	R3HDM2	100	92.653	ENSAMEG00000004812	R3HDM2	100	94.084	Ailuropoda_melanoleuca
ENSCLAG00000011997	R3HDM2	93	65.823	ENSACIG00000016146	r3hdm2	98	65.928	Amphilophus_citrinellus
ENSCLAG00000011997	R3HDM2	99	66.020	ENSAOCG00000023694	r3hdm2	99	66.081	Amphiprion_ocellaris
ENSCLAG00000011997	R3HDM2	62	38.074	ENSAPEG00000014325	-	82	36.834	Amphiprion_percula
ENSCLAG00000011997	R3HDM2	99	65.915	ENSAPEG00000008851	r3hdm2	99	68.012	Amphiprion_percula
ENSCLAG00000011997	R3HDM2	99	64.361	ENSATEG00000025024	r3hdm2	100	68.796	Anabas_testudineus
ENSCLAG00000011997	R3HDM2	100	81.489	ENSACAG00000006388	R3HDM2	100	81.489	Anolis_carolinensis
ENSCLAG00000011997	R3HDM2	100	95.569	ENSANAG00000025397	-	100	95.569	Aotus_nancymaae
ENSCLAG00000011997	R3HDM2	98	90.956	ENSANAG00000031310	-	100	90.956	Aotus_nancymaae
ENSCLAG00000011997	R3HDM2	99	65.293	ENSACLG00000019106	r3hdm2	95	68.527	Astatotilapia_calliptera
ENSCLAG00000011997	R3HDM2	88	71.883	ENSAMXG00000017180	r3hdm2	99	61.303	Astyanax_mexicanus
ENSCLAG00000011997	R3HDM2	100	94.461	ENSBTAG00000018361	R3HDM2	100	94.461	Bos_taurus
ENSCLAG00000011997	R3HDM2	100	95.065	ENSCJAG00000007365	R3HDM2	100	95.065	Callithrix_jacchus
ENSCLAG00000011997	R3HDM2	100	93.189	ENSCAFG00000000215	R3HDM2	100	94.277	Canis_familiaris
ENSCLAG00000011997	R3HDM2	100	93.152	ENSCAFG00020023713	R3HDM2	100	94.260	Canis_lupus_dingo
ENSCLAG00000011997	R3HDM2	100	94.058	ENSCHIG00000014022	R3HDM2	100	94.058	Capra_hircus
ENSCLAG00000011997	R3HDM2	100	92.596	ENSTSYG00000001449	R3HDM2	100	93.781	Carlito_syrichta
ENSCLAG00000011997	R3HDM2	100	96.203	ENSCPOG00000009217	R3HDM2	100	96.203	Cavia_porcellus
ENSCLAG00000011997	R3HDM2	89	95.000	ENSCCAG00000026083	R3HDM2	100	95.000	Cebus_capucinus
ENSCLAG00000011997	R3HDM2	100	95.670	ENSCATG00000036929	R3HDM2	100	95.670	Cercocebus_atys
ENSCLAG00000011997	R3HDM2	100	95.914	ENSCSAG00000004911	R3HDM2	100	95.914	Chlorocebus_sabaeus
ENSCLAG00000011997	R3HDM2	76	89.662	ENSCHOG00000005636	R3HDM2	91	90.258	Choloepus_hoffmanni
ENSCLAG00000011997	R3HDM2	100	79.647	ENSCPBG00000013922	R3HDM2	100	79.740	Chrysemys_picta_bellii
ENSCLAG00000011997	R3HDM2	100	95.468	ENSCANG00000043807	R3HDM2	100	95.468	Colobus_angolensis_palliatus
ENSCLAG00000011997	R3HDM2	100	93.152	ENSCGRG00001017324	R3hdm2	100	93.152	Cricetulus_griseus_chok1gshd
ENSCLAG00000011997	R3HDM2	100	92.536	ENSCGRG00000003862	R3hdm2	100	92.536	Cricetulus_griseus_crigri
ENSCLAG00000011997	R3HDM2	99	65.349	ENSCSEG00000010925	r3hdm2	100	65.006	Cynoglossus_semilaevis
ENSCLAG00000011997	R3HDM2	99	64.552	ENSCVAG00000009058	r3hdm2	99	65.977	Cyprinodon_variegatus
ENSCLAG00000011997	R3HDM2	54	36.130	ENSCVAG00000007202	-	50	42.609	Cyprinodon_variegatus
ENSCLAG00000011997	R3HDM2	93	64.862	ENSDARG00000102610	r3hdm2	99	65.116	Danio_rerio
ENSCLAG00000011997	R3HDM2	100	94.288	ENSDNOG00000015033	R3HDM2	100	95.017	Dasypus_novemcinctus
ENSCLAG00000011997	R3HDM2	94	91.536	ENSDORG00000011462	R3hdm2	99	91.536	Dipodomys_ordii
ENSCLAG00000011997	R3HDM2	100	95.065	ENSEASG00005007091	R3HDM2	100	95.065	Equus_asinus_asinus
ENSCLAG00000011997	R3HDM2	100	94.663	ENSECAG00000003157	R3HDM2	100	94.663	Equus_caballus
ENSCLAG00000011997	R3HDM2	96	65.160	ENSELUG00000015969	r3hdm2	100	61.136	Esox_lucius
ENSCLAG00000011997	R3HDM2	100	93.110	ENSFCAG00000000192	R3HDM2	99	93.756	Felis_catus
ENSCLAG00000011997	R3HDM2	89	77.419	ENSFALG00000000255	R3HDM2	100	77.419	Ficedula_albicollis
ENSCLAG00000011997	R3HDM2	100	96.784	ENSFDAG00000019385	R3HDM2	100	96.784	Fukomys_damarensis
ENSCLAG00000011997	R3HDM2	99	64.570	ENSFHEG00000016484	r3hdm2	99	65.527	Fundulus_heteroclitus
ENSCLAG00000011997	R3HDM2	51	39.091	ENSFHEG00000007936	-	76	37.655	Fundulus_heteroclitus
ENSCLAG00000011997	R3HDM2	95	65.782	ENSGMOG00000007961	r3hdm2	100	64.868	Gadus_morhua
ENSCLAG00000011997	R3HDM2	100	79.322	ENSGALG00000043736	R3HDM2	100	78.619	Gallus_gallus
ENSCLAG00000011997	R3HDM2	99	65.957	ENSGAFG00000013887	r3hdm2	100	65.150	Gambusia_affinis
ENSCLAG00000011997	R3HDM2	62	36.898	ENSGAFG00000015558	-	88	35.171	Gambusia_affinis
ENSCLAG00000011997	R3HDM2	95	68.597	ENSGACG00000006442	r3hdm2	100	69.185	Gasterosteus_aculeatus
ENSCLAG00000011997	R3HDM2	100	79.785	ENSGAGG00000017797	R3HDM2	100	79.785	Gopherus_agassizii
ENSCLAG00000011997	R3HDM2	100	95.871	ENSGGOG00000015007	R3HDM2	100	95.871	Gorilla_gorilla
ENSCLAG00000011997	R3HDM2	88	89.180	ENSHGLG00000010421	-	97	89.180	Heterocephalus_glaber_female
ENSCLAG00000011997	R3HDM2	100	96.689	ENSHGLG00000010434	-	100	96.689	Heterocephalus_glaber_female
ENSCLAG00000011997	R3HDM2	96	86.015	ENSHGLG00100018871	-	99	86.015	Heterocephalus_glaber_male
ENSCLAG00000011997	R3HDM2	100	96.777	ENSHGLG00100004183	-	100	96.777	Heterocephalus_glaber_male
ENSCLAG00000011997	R3HDM2	99	63.757	ENSHCOG00000001142	r3hdm2	92	66.867	Hippocampus_comes
ENSCLAG00000011997	R3HDM2	99	62.793	ENSIPUG00000023873	r3hdm2	99	64.045	Ictalurus_punctatus
ENSCLAG00000011997	R3HDM2	100	91.541	ENSSTOG00000013424	R3HDM2	100	91.541	Ictidomys_tridecemlineatus
ENSCLAG00000011997	R3HDM2	100	94.067	ENSJJAG00000010001	R3hdm2	100	94.450	Jaculus_jaculus
ENSCLAG00000011997	R3HDM2	99	65.651	ENSKMAG00000012695	r3hdm2	99	68.559	Kryptolebias_marmoratus
ENSCLAG00000011997	R3HDM2	99	65.434	ENSLBEG00000013115	r3hdm2	92	67.339	Labrus_bergylta
ENSCLAG00000011997	R3HDM2	95	72.056	ENSLACG00000019064	r3hdm2	100	72.189	Latimeria_chalumnae
ENSCLAG00000011997	R3HDM2	100	71.091	ENSLOCG00000005976	r3hdm2	100	71.681	Lepisosteus_oculatus
ENSCLAG00000011997	R3HDM2	100	93.397	ENSLAFG00000006510	R3HDM2	100	93.397	Loxodonta_africana
ENSCLAG00000011997	R3HDM2	100	95.871	ENSMFAG00000036385	R3HDM2	100	95.871	Macaca_fascicularis
ENSCLAG00000011997	R3HDM2	100	95.871	ENSMMUG00000021789	R3HDM2	100	95.871	Macaca_mulatta
ENSCLAG00000011997	R3HDM2	100	95.972	ENSMNEG00000025314	R3HDM2	100	95.972	Macaca_nemestrina
ENSCLAG00000011997	R3HDM2	100	95.770	ENSMLEG00000028915	R3HDM2	100	95.770	Mandrillus_leucophaeus
ENSCLAG00000011997	R3HDM2	99	65.074	ENSMAMG00000009793	r3hdm2	99	65.530	Mastacembelus_armatus
ENSCLAG00000011997	R3HDM2	99	65.293	ENSMZEG00005007319	r3hdm2	95	68.527	Maylandia_zebra
ENSCLAG00000011997	R3HDM2	100	95.276	ENSMICG00000012389	R3HDM2	100	95.276	Microcebus_murinus
ENSCLAG00000011997	R3HDM2	100	93.476	ENSMOCG00000014425	R3hdm2	100	93.476	Microtus_ochrogaster
ENSCLAG00000011997	R3HDM2	95	66.038	ENSMMOG00000007448	r3hdm2	99	66.002	Mola_mola
ENSCLAG00000011997	R3HDM2	84	76.190	ENSMALG00000010211	r3hdm2	97	73.556	Monopterus_albus
ENSCLAG00000011997	R3HDM2	100	94.163	MGP_CAROLIEiJ_G0015896	R3hdm2	100	94.163	Mus_caroli
ENSCLAG00000011997	R3HDM2	100	94.067	ENSMUSG00000025404	R3hdm2	100	94.067	Mus_musculus
ENSCLAG00000011997	R3HDM2	100	93.206	MGP_PahariEiJ_G0031189	R3hdm2	100	93.876	Mus_pahari
ENSCLAG00000011997	R3HDM2	100	93.881	MGP_SPRETEiJ_G0016722	R3hdm2	100	93.881	Mus_spretus
ENSCLAG00000011997	R3HDM2	98	91.934	ENSMPUG00000001818	R3HDM2	98	92.226	Mustela_putorius_furo
ENSCLAG00000011997	R3HDM2	100	93.684	ENSMLUG00000004980	R3HDM2	100	93.684	Myotis_lucifugus
ENSCLAG00000011997	R3HDM2	100	94.965	ENSNGAG00000018800	R3hdm2	100	94.965	Nannospalax_galili
ENSCLAG00000011997	R3HDM2	94	64.932	ENSNBRG00000004483	r3hdm2	99	66.632	Neolamprologus_brichardi
ENSCLAG00000011997	R3HDM2	100	95.770	ENSNLEG00000017351	R3HDM2	100	95.770	Nomascus_leucogenys
ENSCLAG00000011997	R3HDM2	99	81.184	ENSMEUG00000008588	R3HDM2	100	80.993	Notamacropus_eugenii
ENSCLAG00000011997	R3HDM2	100	84.304	ENSOPRG00000013670	R3HDM2	100	84.304	Ochotona_princeps
ENSCLAG00000011997	R3HDM2	99	66.405	ENSONIG00000005075	r3hdm2	95	69.731	Oreochromis_niloticus
ENSCLAG00000011997	R3HDM2	100	93.989	ENSOCUG00000013258	R3HDM2	100	93.989	Oryctolagus_cuniculus
ENSCLAG00000011997	R3HDM2	99	65.121	ENSORLG00000005502	r3hdm2	95	67.215	Oryzias_latipes
ENSCLAG00000011997	R3HDM2	99	64.750	ENSORLG00020017069	r3hdm2	95	67.021	Oryzias_latipes_hni
ENSCLAG00000011997	R3HDM2	99	65.028	ENSORLG00015012735	r3hdm2	95	67.118	Oryzias_latipes_hsok
ENSCLAG00000011997	R3HDM2	99	60.612	ENSOMEG00000018079	r3hdm2	93	63.732	Oryzias_melastigma
ENSCLAG00000011997	R3HDM2	96	81.733	ENSOGAG00000027966	-	99	80.582	Otolemur_garnettii
ENSCLAG00000011997	R3HDM2	100	94.669	ENSOGAG00000012055	R3HDM2	100	94.669	Otolemur_garnettii
ENSCLAG00000011997	R3HDM2	100	93.675	ENSOARG00000006929	R3HDM2	100	93.675	Ovis_aries
ENSCLAG00000011997	R3HDM2	100	96.073	ENSPPAG00000034395	R3HDM2	100	96.073	Pan_paniscus
ENSCLAG00000011997	R3HDM2	100	93.152	ENSPPRG00000009240	R3HDM2	100	94.260	Panthera_pardus
ENSCLAG00000011997	R3HDM2	100	93.152	ENSPTIG00000008752	R3HDM2	100	94.260	Panthera_tigris_altaica
ENSCLAG00000011997	R3HDM2	100	96.173	ENSPTRG00000046457	R3HDM2	100	96.173	Pan_troglodytes
ENSCLAG00000011997	R3HDM2	98	94.564	ENSPANG00000024002	R3HDM2	100	94.564	Papio_anubis
ENSCLAG00000011997	R3HDM2	99	67.498	ENSPKIG00000003171	r3hdm2	95	69.408	Paramormyrops_kingsleyae
ENSCLAG00000011997	R3HDM2	63	72.457	ENSPSIG00000006954	R3HDM2	100	72.613	Pelodiscus_sinensis
ENSCLAG00000011997	R3HDM2	93	68.870	ENSPMGG00000007061	r3hdm2	99	69.116	Periophthalmus_magnuspinnatus
ENSCLAG00000011997	R3HDM2	100	93.260	ENSPEMG00000015964	R3hdm2	100	93.260	Peromyscus_maniculatus_bairdii
ENSCLAG00000011997	R3HDM2	100	89.558	ENSPCIG00000023841	R3HDM2	100	88.956	Phascolarctos_cinereus
ENSCLAG00000011997	R3HDM2	62	35.596	ENSPFOG00000008096	-	78	38.534	Poecilia_formosa
ENSCLAG00000011997	R3HDM2	94	75.216	ENSPFOG00000006077	r3hdm2	95	77.810	Poecilia_formosa
ENSCLAG00000011997	R3HDM2	99	65.038	ENSPLAG00000002971	r3hdm2	99	65.728	Poecilia_latipinna
ENSCLAG00000011997	R3HDM2	62	34.992	ENSPLAG00000006973	-	78	38.346	Poecilia_latipinna
ENSCLAG00000011997	R3HDM2	62	35.897	ENSPMEG00000014457	-	78	39.098	Poecilia_mexicana
ENSCLAG00000011997	R3HDM2	99	65.038	ENSPMEG00000005330	r3hdm2	99	65.728	Poecilia_mexicana
ENSCLAG00000011997	R3HDM2	99	65.250	ENSPREG00000008424	r3hdm2	99	65.928	Poecilia_reticulata
ENSCLAG00000011997	R3HDM2	98	89.516	ENSPPYG00000004685	R3HDM2	81	89.415	Pongo_abelii
ENSCLAG00000011997	R3HDM2	88	92.647	ENSPCAG00000014642	R3HDM2	91	94.318	Procavia_capensis
ENSCLAG00000011997	R3HDM2	100	95.065	ENSPCOG00000013201	R3HDM2	100	95.065	Propithecus_coquereli
ENSCLAG00000011997	R3HDM2	100	94.163	ENSPVAG00000003967	R3HDM2	100	94.163	Pteropus_vampyrus
ENSCLAG00000011997	R3HDM2	94	65.213	ENSPNYG00000013479	r3hdm2	100	66.458	Pundamilia_nyererei
ENSCLAG00000011997	R3HDM2	99	64.537	ENSPNAG00000017473	r3hdm2	99	65.129	Pygocentrus_nattereri
ENSCLAG00000011997	R3HDM2	100	93.403	ENSRNOG00000007801	R3hdm2	100	93.403	Rattus_norvegicus
ENSCLAG00000011997	R3HDM2	100	92.951	ENSRBIG00000037403	R3HDM2	100	92.649	Rhinopithecus_bieti
ENSCLAG00000011997	R3HDM2	100	95.569	ENSRROG00000022271	R3HDM2	100	95.569	Rhinopithecus_roxellana
ENSCLAG00000011997	R3HDM2	100	95.569	ENSSBOG00000023547	R3HDM2	100	95.569	Saimiri_boliviensis_boliviensis
ENSCLAG00000011997	R3HDM2	100	86.597	ENSSHAG00000003511	R3HDM2	99	90.260	Sarcophilus_harrisii
ENSCLAG00000011997	R3HDM2	94	70.053	ENSSFOG00015011219	r3hdm2	99	68.980	Scleropages_formosus
ENSCLAG00000011997	R3HDM2	99	65.488	ENSSMAG00000012073	r3hdm2	100	65.553	Scophthalmus_maximus
ENSCLAG00000011997	R3HDM2	56	37.964	ENSSDUG00000009188	-	84	35.303	Seriola_dumerili
ENSCLAG00000011997	R3HDM2	99	66.259	ENSSDUG00000019269	r3hdm2	100	65.654	Seriola_dumerili
ENSCLAG00000011997	R3HDM2	99	66.296	ENSSLDG00000005252	r3hdm2	100	65.687	Seriola_lalandi_dorsalis
ENSCLAG00000011997	R3HDM2	93	88.376	ENSSARG00000003958	R3HDM2	94	88.376	Sorex_araneus
ENSCLAG00000011997	R3HDM2	100	77.595	ENSSPUG00000014132	R3HDM2	100	77.401	Sphenodon_punctatus
ENSCLAG00000011997	R3HDM2	99	65.789	ENSSPAG00000022594	r3hdm2	100	66.809	Stegastes_partitus
ENSCLAG00000011997	R3HDM2	53	52.117	ENSSPAG00000016856	-	90	34.243	Stegastes_partitus
ENSCLAG00000011997	R3HDM2	100	94.763	ENSSSCG00000026498	R3HDM2	100	95.091	Sus_scrofa
ENSCLAG00000011997	R3HDM2	73	79.297	ENSTGUG00000015881	R3HDM2	100	78.516	Taeniopygia_guttata
ENSCLAG00000011997	R3HDM2	95	63.711	ENSTRUG00000015075	r3hdm2	99	64.433	Takifugu_rubripes
ENSCLAG00000011997	R3HDM2	87	82.471	ENSTNIG00000007057	r3hdm2	87	79.310	Tetraodon_nigroviridis
ENSCLAG00000011997	R3HDM2	81	96.774	ENSTBEG00000015967	R3HDM2	81	96.774	Tupaia_belangeri
ENSCLAG00000011997	R3HDM2	96	86.994	ENSTTRG00000013082	R3HDM2	93	88.699	Tursiops_truncatus
ENSCLAG00000011997	R3HDM2	100	92.951	ENSUAMG00000020913	R3HDM2	100	94.352	Ursus_americanus
ENSCLAG00000011997	R3HDM2	100	87.940	ENSUMAG00000019179	R3HDM2	100	89.548	Ursus_maritimus
ENSCLAG00000011997	R3HDM2	100	88.325	ENSVPAG00000008656	R3HDM2	100	88.325	Vicugna_pacos
ENSCLAG00000011997	R3HDM2	98	92.982	ENSVVUG00000018014	R3HDM2	97	94.055	Vulpes_vulpes
ENSCLAG00000011997	R3HDM2	100	73.390	ENSXETG00000017153	r3hdm2	100	72.159	Xenopus_tropicalis
ENSCLAG00000011997	R3HDM2	86	63.270	ENSXCOG00000013882	r3hdm2	100	64.318	Xiphophorus_couchianus
ENSCLAG00000011997	R3HDM2	99	64.972	ENSXMAG00000017978	r3hdm2	99	66.113	Xiphophorus_maculatus
ENSCLAG00000011997	R3HDM2	62	36.596	ENSXMAG00000002994	-	88	35.618	Xiphophorus_maculatus