EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000012048 (Gene tree)
Gene ID: 102012398
Gene Symbol: PNKD
Alias: BRP17|DKFZp564N1362|DYT8|FKSG19|FPD1|KIAA1184|KIPP1184|MGC31943|MR-1|MR-1S|PDC|PKND1|TAHCCP2
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 73649 bases
Position: chrJH721913.1:15030436-15104084
Accession: 102012398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000017557	Lactamase_B	PF00753.27	9.3e-12	1	1
ENSCLAP00000017556	Lactamase_B	PF00753.27	1.3e-11	1	1
ENSCLAP00000017558	Lactamase_B	PF00753.27	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000017729	PNKD-202	2654	XM_005395655	ENSCLAP00000017557	360 (aa)	XP_005395712	UPI00038EC45F
ENSCLAT00000017728	PNKD-201	2839	XM_005395654	ENSCLAP00000017556	385 (aa)	XP_005395711	UPI00038EE2EA
ENSCLAT00000017730	PNKD-203	1275	-	ENSCLAP00000017558	424 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000012048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000012048	PNKD	66	43.277	ENSCLAG00000013689	HAGH	91	43.277

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012048	PNKD	100	96.364	ENSG00000127838	PNKD	100	96.364	Homo_sapiens
ENSCLAG00000012048	PNKD	89	62.382	ENSAPOG00000019072	pnkd	97	57.714	Acanthochromis_polyacanthus
ENSCLAG00000012048	PNKD	100	95.325	ENSAMEG00000003089	PNKD	100	95.325	Ailuropoda_melanoleuca
ENSCLAG00000012048	PNKD	97	54.570	ENSACIG00000015359	pnkd	96	54.570	Amphilophus_citrinellus
ENSCLAG00000012048	PNKD	89	62.069	ENSAOCG00000011458	-	89	62.069	Amphiprion_ocellaris
ENSCLAG00000012048	PNKD	81	59.532	ENSAOCG00000024159	pnkd	96	54.545	Amphiprion_ocellaris
ENSCLAG00000012048	PNKD	89	62.069	ENSAPEG00000011710	pnkd	89	62.069	Amphiprion_percula
ENSCLAG00000012048	PNKD	89	61.755	ENSATEG00000002727	pnkd	97	57.558	Anabas_testudineus
ENSCLAG00000012048	PNKD	89	62.813	ENSACAG00000001617	PNKD	99	55.978	Anolis_carolinensis
ENSCLAG00000012048	PNKD	100	96.364	ENSANAG00000019661	PNKD	100	96.364	Aotus_nancymaae
ENSCLAG00000012048	PNKD	89	62.696	ENSACLG00000021665	pnkd	89	62.696	Astatotilapia_calliptera
ENSCLAG00000012048	PNKD	89	63.438	ENSAMXG00000043305	pnkd	89	63.438	Astyanax_mexicanus
ENSCLAG00000012048	PNKD	100	91.944	ENSBTAG00000003936	PNKD	100	91.944	Bos_taurus
ENSCLAG00000012048	PNKD	100	96.364	ENSCJAG00000010820	PNKD	100	96.364	Callithrix_jacchus
ENSCLAG00000012048	PNKD	100	93.247	ENSCAFG00000014632	PNKD	100	93.247	Canis_familiaris
ENSCLAG00000012048	PNKD	100	91.389	ENSCAFG00020027093	PNKD	100	91.389	Canis_lupus_dingo
ENSCLAG00000012048	PNKD	100	95.065	ENSCHIG00000002862	PNKD	100	95.065	Capra_hircus
ENSCLAG00000012048	PNKD	100	96.104	ENSTSYG00000034863	PNKD	100	96.104	Carlito_syrichta
ENSCLAG00000012048	PNKD	100	96.934	ENSCPOG00000020589	PNKD	100	96.934	Cavia_porcellus
ENSCLAG00000012048	PNKD	100	96.104	ENSCCAG00000036713	PNKD	100	96.104	Cebus_capucinus
ENSCLAG00000012048	PNKD	100	96.623	ENSCATG00000041188	PNKD	100	96.623	Cercocebus_atys
ENSCLAG00000012048	PNKD	100	96.623	ENSCSAG00000008892	PNKD	100	96.623	Chlorocebus_sabaeus
ENSCLAG00000012048	PNKD	100	96.623	ENSCANG00000032283	PNKD	100	96.623	Colobus_angolensis_palliatus
ENSCLAG00000012048	PNKD	100	96.623	ENSCGRG00001024071	Pnkd	100	96.623	Cricetulus_griseus_chok1gshd
ENSCLAG00000012048	PNKD	100	94.167	ENSCGRG00000005443	Pnkd	100	94.299	Cricetulus_griseus_crigri
ENSCLAG00000012048	PNKD	89	59.875	ENSCSEG00000013958	pnkd	99	54.342	Cynoglossus_semilaevis
ENSCLAG00000012048	PNKD	89	61.755	ENSCVAG00000005723	pnkd	99	56.303	Cyprinodon_variegatus
ENSCLAG00000012048	PNKD	89	61.875	ENSDARG00000071032	pnkd	89	61.875	Danio_rerio
ENSCLAG00000012048	PNKD	100	91.111	ENSDNOG00000046154	PNKD	89	91.111	Dasypus_novemcinctus
ENSCLAG00000012048	PNKD	100	96.899	ENSDORG00000016109	Pnkd	100	96.899	Dipodomys_ordii
ENSCLAG00000012048	PNKD	100	65.553	ENSETEG00000014587	PNKD	100	65.553	Echinops_telfairi
ENSCLAG00000012048	PNKD	85	54.902	ENSEBUG00000013857	pnkd	98	54.440	Eptatretus_burgeri
ENSCLAG00000012048	PNKD	100	91.944	ENSEASG00005012391	PNKD	100	91.944	Equus_asinus_asinus
ENSCLAG00000012048	PNKD	100	95.065	ENSECAG00000013322	PNKD	100	95.065	Equus_caballus
ENSCLAG00000012048	PNKD	96	57.971	ENSELUG00000015007	pnkd	91	56.857	Esox_lucius
ENSCLAG00000012048	PNKD	100	92.500	ENSFCAG00000002373	PNKD	100	92.500	Felis_catus
ENSCLAG00000012048	PNKD	86	63.754	ENSFALG00000004028	PNKD	95	63.208	Ficedula_albicollis
ENSCLAG00000012048	PNKD	100	97.922	ENSFDAG00000012326	PNKD	100	97.922	Fukomys_damarensis
ENSCLAG00000012048	PNKD	89	61.755	ENSFHEG00000010999	pnkd	86	61.755	Fundulus_heteroclitus
ENSCLAG00000012048	PNKD	100	56.906	ENSGMOG00000009565	pnkd	96	56.395	Gadus_morhua
ENSCLAG00000012048	PNKD	85	63.399	ENSGALG00000022166	PNKD	99	62.581	Gallus_gallus
ENSCLAG00000012048	PNKD	89	62.069	ENSGAFG00000013942	pnkd	80	62.069	Gambusia_affinis
ENSCLAG00000012048	PNKD	88	63.175	ENSGACG00000007119	pnkd	88	63.175	Gasterosteus_aculeatus
ENSCLAG00000012048	PNKD	87	62.500	ENSGAGG00000017234	PNKD	98	62.500	Gopherus_agassizii
ENSCLAG00000012048	PNKD	100	96.364	ENSGGOG00000006892	PNKD	100	96.364	Gorilla_gorilla
ENSCLAG00000012048	PNKD	89	62.696	ENSHBUG00000001234	pnkd	89	62.696	Haplochromis_burtoni
ENSCLAG00000012048	PNKD	100	97.877	ENSHGLG00000013971	PNKD	100	97.877	Heterocephalus_glaber_female
ENSCLAG00000012048	PNKD	100	97.877	ENSHGLG00100005225	PNKD	100	97.877	Heterocephalus_glaber_male
ENSCLAG00000012048	PNKD	87	62.739	ENSHCOG00000018894	pnkd	88	62.739	Hippocampus_comes
ENSCLAG00000012048	PNKD	100	59.504	ENSIPUG00000013907	pnkd	99	64.821	Ictalurus_punctatus
ENSCLAG00000012048	PNKD	100	97.403	ENSSTOG00000024593	PNKD	100	97.403	Ictidomys_tridecemlineatus
ENSCLAG00000012048	PNKD	100	94.805	ENSJJAG00000023559	Pnkd	100	95.844	Jaculus_jaculus
ENSCLAG00000012048	PNKD	89	61.755	ENSKMAG00000014879	pnkd	89	61.755	Kryptolebias_marmoratus
ENSCLAG00000012048	PNKD	89	62.069	ENSLBEG00000000985	pnkd	89	62.069	Labrus_bergylta
ENSCLAG00000012048	PNKD	100	57.576	ENSLOCG00000000821	pnkd	91	61.094	Lepisosteus_oculatus
ENSCLAG00000012048	PNKD	100	93.396	ENSLAFG00000007427	PNKD	100	93.396	Loxodonta_africana
ENSCLAG00000012048	PNKD	100	96.623	ENSMFAG00000038281	PNKD	100	96.623	Macaca_fascicularis
ENSCLAG00000012048	PNKD	50	98.343	ENSMMUG00000022819	-	100	98.343	Macaca_mulatta
ENSCLAG00000012048	PNKD	100	93.075	ENSMNEG00000041541	PNKD	100	97.134	Macaca_nemestrina
ENSCLAG00000012048	PNKD	100	96.623	ENSMLEG00000042812	PNKD	100	96.623	Mandrillus_leucophaeus
ENSCLAG00000012048	PNKD	89	61.442	ENSMAMG00000017212	pnkd	99	56.303	Mastacembelus_armatus
ENSCLAG00000012048	PNKD	82	63.051	ENSMZEG00005012514	pnkd	100	63.051	Maylandia_zebra
ENSCLAG00000012048	PNKD	50	51.364	ENSMGAG00000011524	PNKD	100	56.250	Meleagris_gallopavo
ENSCLAG00000012048	PNKD	100	93.889	ENSMAUG00000013099	Pnkd	100	93.889	Mesocricetus_auratus
ENSCLAG00000012048	PNKD	100	96.623	ENSMICG00000042547	PNKD	100	96.623	Microcebus_murinus
ENSCLAG00000012048	PNKD	100	96.891	ENSMOCG00000007956	Pnkd	100	96.891	Microtus_ochrogaster
ENSCLAG00000012048	PNKD	90	60.736	ENSMMOG00000005679	pnkd	94	60.736	Mola_mola
ENSCLAG00000012048	PNKD	86	80.386	ENSMODG00000015497	PNKD	87	80.386	Monodelphis_domestica
ENSCLAG00000012048	PNKD	88	63.208	ENSMALG00000005967	pnkd	80	63.208	Monopterus_albus
ENSCLAG00000012048	PNKD	100	96.623	MGP_CAROLIEiJ_G0014258	Pnkd	100	96.623	Mus_caroli
ENSCLAG00000012048	PNKD	100	96.883	ENSMUSG00000026179	Pnkd	100	96.883	Mus_musculus
ENSCLAG00000012048	PNKD	100	96.883	MGP_PahariEiJ_G0027496	Pnkd	100	96.883	Mus_pahari
ENSCLAG00000012048	PNKD	100	96.623	MGP_SPRETEiJ_G0015064	Pnkd	100	96.623	Mus_spretus
ENSCLAG00000012048	PNKD	100	92.500	ENSMPUG00000016531	PNKD	100	92.500	Mustela_putorius_furo
ENSCLAG00000012048	PNKD	85	95.098	ENSMLUG00000004125	PNKD	100	95.098	Myotis_lucifugus
ENSCLAG00000012048	PNKD	100	96.364	ENSNGAG00000014980	Pnkd	100	96.364	Nannospalax_galili
ENSCLAG00000012048	PNKD	86	62.987	ENSNBRG00000020031	pnkd	96	62.783	Neolamprologus_brichardi
ENSCLAG00000012048	PNKD	100	73.766	ENSMEUG00000011266	PNKD	100	73.766	Notamacropus_eugenii
ENSCLAG00000012048	PNKD	100	98.056	ENSODEG00000009734	PNKD	100	98.056	Octodon_degus
ENSCLAG00000012048	PNKD	89	62.069	ENSONIG00000004389	pnkd	89	62.069	Oreochromis_niloticus
ENSCLAG00000012048	PNKD	100	94.104	ENSOCUG00000023754	PNKD	100	94.104	Oryctolagus_cuniculus
ENSCLAG00000012048	PNKD	88	61.587	ENSORLG00000026276	pnkd	88	61.587	Oryzias_latipes
ENSCLAG00000012048	PNKD	88	61.587	ENSORLG00020008373	pnkd	97	62.252	Oryzias_latipes_hni
ENSCLAG00000012048	PNKD	90	60.121	ENSORLG00015005276	pnkd	92	60.121	Oryzias_latipes_hsok
ENSCLAG00000012048	PNKD	88	61.905	ENSOMEG00000016106	pnkd	88	61.905	Oryzias_melastigma
ENSCLAG00000012048	PNKD	85	97.712	ENSOGAG00000001792	PNKD	100	97.712	Otolemur_garnettii
ENSCLAG00000012048	PNKD	100	95.325	ENSOARG00000019505	PNKD	100	95.325	Ovis_aries
ENSCLAG00000012048	PNKD	100	96.364	ENSPPAG00000034969	PNKD	100	96.364	Pan_paniscus
ENSCLAG00000012048	PNKD	100	92.500	ENSPPRG00000023720	PNKD	100	92.500	Panthera_pardus
ENSCLAG00000012048	PNKD	100	88.571	ENSPTIG00000021040	PNKD	100	88.571	Panthera_tigris_altaica
ENSCLAG00000012048	PNKD	100	96.104	ENSPTRG00000012914	PNKD	100	96.104	Pan_troglodytes
ENSCLAG00000012048	PNKD	100	96.623	ENSPANG00000005752	PNKD	100	96.623	Papio_anubis
ENSCLAG00000012048	PNKD	97	58.908	ENSPKIG00000011208	pnkd	100	60.692	Paramormyrops_kingsleyae
ENSCLAG00000012048	PNKD	85	60.458	ENSPMGG00000005169	pnkd	100	60.458	Periophthalmus_magnuspinnatus
ENSCLAG00000012048	PNKD	100	96.104	ENSPEMG00000010689	Pnkd	100	96.104	Peromyscus_maniculatus_bairdii
ENSCLAG00000012048	PNKD	85	55.229	ENSPMAG00000006947	pnkd	99	55.229	Petromyzon_marinus
ENSCLAG00000012048	PNKD	100	76.309	ENSPCIG00000021457	PNKD	100	76.309	Phascolarctos_cinereus
ENSCLAG00000012048	PNKD	88	62.540	ENSPFOG00000010628	pnkd	95	58.430	Poecilia_formosa
ENSCLAG00000012048	PNKD	62	66.071	ENSPLAG00000020583	pnkd	95	60.079	Poecilia_latipinna
ENSCLAG00000012048	PNKD	72	65.251	ENSPMEG00000006542	pnkd	73	60.069	Poecilia_mexicana
ENSCLAG00000012048	PNKD	88	61.905	ENSPREG00000014434	pnkd	95	57.726	Poecilia_reticulata
ENSCLAG00000012048	PNKD	100	96.364	ENSPPYG00000013167	PNKD	100	96.364	Pongo_abelii
ENSCLAG00000012048	PNKD	100	76.364	ENSPCAG00000003946	PNKD	100	76.364	Procavia_capensis
ENSCLAG00000012048	PNKD	100	97.403	ENSPCOG00000019839	PNKD	100	97.403	Propithecus_coquereli
ENSCLAG00000012048	PNKD	88	62.893	ENSPNYG00000016327	pnkd	100	62.893	Pundamilia_nyererei
ENSCLAG00000012048	PNKD	100	60.221	ENSPNAG00000008655	pnkd	100	60.221	Pygocentrus_nattereri
ENSCLAG00000012048	PNKD	100	96.623	ENSRNOG00000014806	Pnkd	100	96.623	Rattus_norvegicus
ENSCLAG00000012048	PNKD	100	96.623	ENSRBIG00000031614	PNKD	100	96.623	Rhinopithecus_bieti
ENSCLAG00000012048	PNKD	100	96.623	ENSRROG00000045542	PNKD	100	96.623	Rhinopithecus_roxellana
ENSCLAG00000012048	PNKD	100	95.844	ENSSBOG00000036000	PNKD	100	95.844	Saimiri_boliviensis_boliviensis
ENSCLAG00000012048	PNKD	88	80.997	ENSSHAG00000016339	PNKD	100	80.997	Sarcophilus_harrisii
ENSCLAG00000012048	PNKD	90	62.346	ENSSFOG00015013028	pnkd	90	61.862	Scleropages_formosus
ENSCLAG00000012048	PNKD	89	61.755	ENSSMAG00000006812	pnkd	89	61.755	Scophthalmus_maximus
ENSCLAG00000012048	PNKD	89	61.442	ENSSDUG00000012538	pnkd	99	56.303	Seriola_dumerili
ENSCLAG00000012048	PNKD	89	61.442	ENSSLDG00000021431	pnkd	86	61.442	Seriola_lalandi_dorsalis
ENSCLAG00000012048	PNKD	86	49.196	ENSSPUG00000018454	PNKD	98	52.288	Sphenodon_punctatus
ENSCLAG00000012048	PNKD	89	62.069	ENSSPAG00000007083	pnkd	89	62.069	Stegastes_partitus
ENSCLAG00000012048	PNKD	100	96.730	ENSSSCG00000029002	PNKD	100	95.860	Sus_scrofa
ENSCLAG00000012048	PNKD	89	60.502	ENSTRUG00000009399	pnkd	89	60.883	Takifugu_rubripes
ENSCLAG00000012048	PNKD	97	56.897	ENSTNIG00000010992	pnkd	90	60.748	Tetraodon_nigroviridis
ENSCLAG00000012048	PNKD	100	93.506	ENSTTRG00000012895	PNKD	100	93.506	Tursiops_truncatus
ENSCLAG00000012048	PNKD	100	91.111	ENSUAMG00000000289	PNKD	100	91.111	Ursus_americanus
ENSCLAG00000012048	PNKD	100	80.000	ENSUMAG00000019639	PNKD	100	80.000	Ursus_maritimus
ENSCLAG00000012048	PNKD	100	95.325	ENSVVUG00000007348	PNKD	100	95.325	Vulpes_vulpes
ENSCLAG00000012048	PNKD	86	64.952	ENSXETG00000014931	pnkd	99	65.372	Xenopus_tropicalis
ENSCLAG00000012048	PNKD	86	62.662	ENSXCOG00000014370	pnkd	95	62.662	Xiphophorus_couchianus