EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000012138 (Gene tree)
Gene ID: 102028402
Gene Symbol: -
Alias: -
Full Name: tudor domain containing 12
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 134672 bases
Position: chrJH721928.1:5141077-5275748
Accession: 102028402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000017700	TUDOR	PF00567.24	1.1e-29	1	2
ENSCLAP00000017700	TUDOR	PF00567.24	1.1e-29	2	2
ENSCLAP00000017701	TUDOR	PF00567.24	1.2e-29	1	2
ENSCLAP00000017701	TUDOR	PF00567.24	1.2e-29	2	2
ENSCLAP00000017700	DEAD	PF00270.29	2.4e-06	1	1
ENSCLAP00000017701	DEAD	PF00270.29	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000017875	-	4413	XM_005400084	ENSCLAP00000017700	1289 (aa)	XP_005400141	-
ENSCLAT00000017876	-	4797	XM_005400080	ENSCLAP00000017701	1319 (aa)	XP_005400137	UPI00038ECA1D

Gene Model

Click here to download ENSCLAG00000012138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012138	-	73	41.473	ENSAPOG00000006421	tdrd12	91	41.473	Acanthochromis_polyacanthus
ENSCLAG00000012138	-	63	81.074	ENSAMEG00000015440	-	100	82.550	Ailuropoda_melanoleuca
ENSCLAG00000012138	-	82	39.576	ENSACIG00000021652	tdrd12	97	44.390	Amphilophus_citrinellus
ENSCLAG00000012138	-	81	46.196	ENSAOCG00000016463	tdrd12	84	46.369	Amphiprion_ocellaris
ENSCLAG00000012138	-	81	45.946	ENSAPEG00000015105	tdrd12	86	45.946	Amphiprion_percula
ENSCLAG00000012138	-	73	42.271	ENSATEG00000011608	tdrd12	93	42.271	Anabas_testudineus
ENSCLAG00000012138	-	84	52.828	ENSAPLG00000011417	-	96	58.333	Anas_platyrhynchos
ENSCLAG00000012138	-	71	51.123	ENSACAG00000029615	-	99	50.416	Anolis_carolinensis
ENSCLAG00000012138	-	89	78.026	ENSANAG00000023166	-	99	76.396	Aotus_nancymaae
ENSCLAG00000012138	-	71	46.999	ENSAMXG00000013811	tdrd12	91	46.999	Astyanax_mexicanus
ENSCLAG00000012138	-	89	78.112	ENSCJAG00000000763	-	99	78.026	Callithrix_jacchus
ENSCLAG00000012138	-	99	77.855	ENSCAFG00000007505	TDRD12	99	76.859	Canis_familiaris
ENSCLAG00000012138	-	99	77.855	ENSCAFG00020019790	-	97	78.152	Canis_lupus_dingo
ENSCLAG00000012138	-	88	78.171	ENSTSYG00000012034	-	99	78.066	Carlito_syrichta
ENSCLAG00000012138	-	93	88.023	ENSCPOG00000002876	-	100	88.023	Cavia_porcellus
ENSCLAG00000012138	-	89	74.764	ENSCCAG00000037592	-	99	74.421	Cebus_capucinus
ENSCLAG00000012138	-	88	73.425	ENSCATG00000038627	-	99	73.293	Cercocebus_atys
ENSCLAG00000012138	-	89	77.883	ENSCSAG00000004794	-	98	77.625	Chlorocebus_sabaeus
ENSCLAG00000012138	-	87	67.323	ENSCPBG00000000147	-	97	67.323	Chrysemys_picta_bellii
ENSCLAG00000012138	-	89	75.236	ENSCANG00000040785	-	99	75.888	Colobus_angolensis_palliatus
ENSCLAG00000012138	-	94	76.023	ENSCGRG00001021407	-	99	76.023	Cricetulus_griseus_chok1gshd
ENSCLAG00000012138	-	92	73.438	ENSCGRG00000007286	-	100	73.438	Cricetulus_griseus_crigri
ENSCLAG00000012138	-	73	40.189	ENSCSEG00000001744	-	75	40.189	Cynoglossus_semilaevis
ENSCLAG00000012138	-	57	46.183	ENSCVAG00000004277	tdrd12	91	46.183	Cyprinodon_variegatus
ENSCLAG00000012138	-	89	40.412	ENSDARG00000075217	tdrd12	88	40.844	Danio_rerio
ENSCLAG00000012138	-	99	78.890	ENSDNOG00000017244	-	99	77.938	Dasypus_novemcinctus
ENSCLAG00000012138	-	92	73.563	ENSDORG00000012134	-	99	73.563	Dipodomys_ordii
ENSCLAG00000012138	-	56	77.143	ENSETEG00000015088	-	80	77.143	Echinops_telfairi
ENSCLAG00000012138	-	99	75.835	ENSEASG00005021053	-	99	75.207	Equus_asinus_asinus
ENSCLAG00000012138	-	78	82.653	ENSEEUG00000008457	-	92	82.653	Erinaceus_europaeus
ENSCLAG00000012138	-	97	37.910	ENSELUG00000017494	tdrd12	98	38.226	Esox_lucius
ENSCLAG00000012138	-	90	55.288	ENSFALG00000000259	-	95	55.288	Ficedula_albicollis
ENSCLAG00000012138	-	94	85.116	ENSFDAG00000014797	-	100	85.116	Fukomys_damarensis
ENSCLAG00000012138	-	60	37.452	ENSFHEG00000002884	-	71	37.452	Fundulus_heteroclitus
ENSCLAG00000012138	-	83	56.888	ENSGALG00000004704	-	95	55.928	Gallus_gallus
ENSCLAG00000012138	-	88	43.192	ENSGAFG00000003729	tdrd12	81	43.192	Gambusia_affinis
ENSCLAG00000012138	-	89	68.504	ENSGAGG00000000247	-	95	68.504	Gopherus_agassizii
ENSCLAG00000012138	-	89	78.492	ENSGGOG00000011938	-	99	78.283	Gorilla_gorilla
ENSCLAG00000012138	-	69	44.868	ENSHBUG00000020426	tdrd12	89	44.868	Haplochromis_burtoni
ENSCLAG00000012138	-	93	84.055	ENSHGLG00000015608	-	98	83.488	Heterocephalus_glaber_female
ENSCLAG00000012138	-	84	90.174	ENSHGLG00100008227	-	99	90.174	Heterocephalus_glaber_male
ENSCLAG00000012138	-	98	37.747	ENSIPUG00000016825	tdrd12	97	37.528	Ictalurus_punctatus
ENSCLAG00000012138	-	93	80.000	ENSSTOG00000013638	-	99	80.000	Ictidomys_tridecemlineatus
ENSCLAG00000012138	-	56	43.161	ENSKMAG00000008031	tdrd12	84	43.161	Kryptolebias_marmoratus
ENSCLAG00000012138	-	72	41.774	ENSLBEG00000005601	tdrd12	91	41.774	Labrus_bergylta
ENSCLAG00000012138	-	85	49.505	ENSLACG00000010650	-	99	49.595	Latimeria_chalumnae
ENSCLAG00000012138	-	99	38.628	ENSLOCG00000001690	tdrd12	100	37.938	Lepisosteus_oculatus
ENSCLAG00000012138	-	85	80.380	ENSLAFG00000008698	-	100	80.380	Loxodonta_africana
ENSCLAG00000012138	-	89	78.388	ENSMFAG00000044756	-	99	78.265	Macaca_fascicularis
ENSCLAG00000012138	-	99	77.304	ENSMMUG00000015608	-	99	78.265	Macaca_mulatta
ENSCLAG00000012138	-	88	78.497	ENSMNEG00000043067	-	99	78.374	Macaca_nemestrina
ENSCLAG00000012138	-	83	81.316	ENSMLEG00000042036	-	98	82.789	Mandrillus_leucophaeus
ENSCLAG00000012138	-	72	43.961	ENSMAMG00000013867	tdrd12	99	38.129	Mastacembelus_armatus
ENSCLAG00000012138	-	73	44.762	ENSMZEG00005024214	tdrd12	97	42.857	Maylandia_zebra
ENSCLAG00000012138	-	63	54.516	ENSMGAG00000005627	-	100	55.347	Meleagris_gallopavo
ENSCLAG00000012138	-	93	74.399	ENSMAUG00000013767	-	99	74.399	Mesocricetus_auratus
ENSCLAG00000012138	-	89	79.930	ENSMICG00000003623	-	99	80.711	Microcebus_murinus
ENSCLAG00000012138	-	93	75.286	ENSMOCG00000002366	-	99	77.989	Microtus_ochrogaster
ENSCLAG00000012138	-	81	44.693	ENSMMOG00000018662	tdrd12	90	44.693	Mola_mola
ENSCLAG00000012138	-	96	65.004	ENSMODG00000012286	-	100	63.056	Monodelphis_domestica
ENSCLAG00000012138	-	83	40.693	ENSMALG00000006918	tdrd12	99	40.693	Monopterus_albus
ENSCLAG00000012138	-	93	73.853	MGP_CAROLIEiJ_G0029587	-	99	77.150	Mus_caroli
ENSCLAG00000012138	-	93	74.270	MGP_PahariEiJ_G0012821	-	99	77.478	Mus_pahari
ENSCLAG00000012138	-	94	74.131	MGP_SPRETEiJ_G0030686	-	99	77.324	Mus_spretus
ENSCLAG00000012138	-	100	77.214	ENSMPUG00000007791	-	100	76.987	Mustela_putorius_furo
ENSCLAG00000012138	-	79	80.303	ENSMLUG00000010694	-	100	80.303	Myotis_lucifugus
ENSCLAG00000012138	-	92	75.356	ENSNGAG00000000793	-	99	75.356	Nannospalax_galili
ENSCLAG00000012138	-	54	42.363	ENSNBRG00000017878	-	97	42.363	Neolamprologus_brichardi
ENSCLAG00000012138	-	89	74.293	ENSNLEG00000007635	-	99	74.163	Nomascus_leucogenys
ENSCLAG00000012138	-	54	86.111	ENSMEUG00000014059	-	64	86.111	Notamacropus_eugenii
ENSCLAG00000012138	-	79	71.077	ENSOPRG00000015809	-	93	71.077	Ochotona_princeps
ENSCLAG00000012138	-	94	86.580	ENSODEG00000014443	-	100	86.580	Octodon_degus
ENSCLAG00000012138	-	85	41.021	ENSONIG00000010630	tdrd12	100	41.112	Oreochromis_niloticus
ENSCLAG00000012138	-	50	60.340	ENSOANG00000029707	-	100	57.759	Ornithorhynchus_anatinus
ENSCLAG00000012138	-	93	76.364	ENSOCUG00000016911	-	99	76.364	Oryctolagus_cuniculus
ENSCLAG00000012138	-	76	41.463	ENSORLG00000027859	tdrd12	88	39.175	Oryzias_latipes
ENSCLAG00000012138	-	88	43.662	ENSORLG00015020835	tdrd12	76	43.662	Oryzias_latipes_hsok
ENSCLAG00000012138	-	69	42.439	ENSOMEG00000021862	tdrd12	86	42.439	Oryzias_melastigma
ENSCLAG00000012138	-	85	81.414	ENSOGAG00000001571	-	99	81.414	Otolemur_garnettii
ENSCLAG00000012138	-	99	77.830	ENSOARG00000004254	-	100	76.364	Ovis_aries
ENSCLAG00000012138	-	89	75.731	ENSPPAG00000042284	-	99	76.650	Pan_paniscus
ENSCLAG00000012138	-	89	78.911	ENSPPRG00000002389	-	100	78.987	Panthera_pardus
ENSCLAG00000012138	-	89	75.043	ENSPTRG00000010795	TDRD12	99	74.764	Pan_troglodytes
ENSCLAG00000012138	-	96	77.179	ENSPANG00000001203	-	99	78.197	Papio_anubis
ENSCLAG00000012138	-	88	41.313	ENSPKIG00000006407	tdrd12	75	46.091	Paramormyrops_kingsleyae
ENSCLAG00000012138	-	79	57.716	ENSPSIG00000012970	-	100	67.337	Pelodiscus_sinensis
ENSCLAG00000012138	-	69	43.382	ENSPMGG00000022691	tdrd12	90	43.382	Periophthalmus_magnuspinnatus
ENSCLAG00000012138	-	93	75.978	ENSPEMG00000009233	-	97	82.214	Peromyscus_maniculatus_bairdii
ENSCLAG00000012138	-	99	65.833	ENSPCIG00000020993	-	100	64.421	Phascolarctos_cinereus
ENSCLAG00000012138	-	87	44.601	ENSPFOG00000008184	tdrd12	84	44.601	Poecilia_formosa
ENSCLAG00000012138	-	55	44.601	ENSPMEG00000006420	tdrd12	92	44.601	Poecilia_mexicana
ENSCLAG00000012138	-	65	45.045	ENSPREG00000004916	tdrd12	77	45.045	Poecilia_reticulata
ENSCLAG00000012138	-	91	77.852	ENSPPYG00000009821	-	99	77.731	Pongo_abelii
ENSCLAG00000012138	-	73	68.340	ENSPCAG00000013510	-	86	68.340	Procavia_capensis
ENSCLAG00000012138	-	89	74.525	ENSPCOG00000023600	-	99	75.635	Propithecus_coquereli
ENSCLAG00000012138	-	81	87.113	ENSPVAG00000014599	-	94	87.113	Pteropus_vampyrus
ENSCLAG00000012138	-	70	44.762	ENSPNYG00000022866	tdrd12	88	44.762	Pundamilia_nyererei
ENSCLAG00000012138	-	69	45.036	ENSPNAG00000003413	tdrd12	86	45.036	Pygocentrus_nattereri
ENSCLAG00000012138	-	100	77.761	ENSRNOG00000012719	Tdrd12	100	77.761	Rattus_norvegicus
ENSCLAG00000012138	-	89	70.730	ENSRBIG00000019899	-	93	73.146	Rhinopithecus_bieti
ENSCLAG00000012138	-	89	77.635	ENSRROG00000036351	-	99	75.635	Rhinopithecus_roxellana
ENSCLAG00000012138	-	89	78.283	ENSSBOG00000034916	-	99	78.197	Saimiri_boliviensis_boliviensis
ENSCLAG00000012138	-	85	68.345	ENSSHAG00000002599	-	99	68.345	Sarcophilus_harrisii
ENSCLAG00000012138	-	68	45.116	ENSSFOG00015000297	tdrd12	81	45.116	Scleropages_formosus
ENSCLAG00000012138	-	82	39.696	ENSSMAG00000002870	tdrd12	90	42.055	Scophthalmus_maximus
ENSCLAG00000012138	-	70	43.705	ENSSDUG00000017304	tdrd12	89	43.705	Seriola_dumerili
ENSCLAG00000012138	-	70	42.981	ENSSLDG00000004415	tdrd12	88	42.981	Seriola_lalandi_dorsalis
ENSCLAG00000012138	-	85	75.319	ENSSARG00000005357	-	99	75.319	Sorex_araneus
ENSCLAG00000012138	-	79	58.151	ENSSPUG00000013174	-	91	59.489	Sphenodon_punctatus
ENSCLAG00000012138	-	76	42.857	ENSSPAG00000005706	tdrd12	86	42.857	Stegastes_partitus
ENSCLAG00000012138	-	78	76.587	ENSSSCG00000002857	-	98	76.984	Sus_scrofa
ENSCLAG00000012138	-	51	51.662	ENSTGUG00000009121	-	100	54.054	Taeniopygia_guttata
ENSCLAG00000012138	-	70	39.779	ENSTRUG00000021888	tdrd12	91	39.779	Takifugu_rubripes
ENSCLAG00000012138	-	68	84.016	ENSTBEG00000007609	-	80	84.016	Tupaia_belangeri
ENSCLAG00000012138	-	85	80.127	ENSTTRG00000012206	-	100	80.127	Tursiops_truncatus
ENSCLAG00000012138	-	88	77.953	ENSUAMG00000007298	-	96	77.690	Ursus_americanus
ENSCLAG00000012138	-	88	77.953	ENSUMAG00000014314	-	96	77.690	Ursus_maritimus
ENSCLAG00000012138	-	81	72.265	ENSVPAG00000012051	-	100	72.265	Vicugna_pacos
ENSCLAG00000012138	-	99	76.526	ENSVVUG00000016637	-	100	76.827	Vulpes_vulpes
ENSCLAG00000012138	-	65	47.110	ENSXETG00000031945	-	100	47.110	Xenopus_tropicalis
ENSCLAG00000012138	-	73	43.541	ENSXMAG00000020908	tdrd12	94	43.541	Xiphophorus_maculatus