EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000012404 (Gene tree)
Gene ID: 102022329
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 30257 bases
Position: chrJH721898.1:14452943-14483199
Accession: 102022329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018083	Beta-Casp	PF10996.8	8.3e-21	1	1
ENSCLAP00000018082	Beta-Casp	PF10996.8	8.4e-21	1	1
ENSCLAP00000018083	Lactamase_B	PF00753.27	1.4e-06	1	1
ENSCLAP00000018082	Lactamase_B	PF00753.27	1.4e-06	1	1
ENSCLAP00000018083	RMMBL	PF07521.12	1e-15	1	1
ENSCLAP00000018082	RMMBL	PF07521.12	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018261	CPSF2-202	6054	XM_005390313	ENSCLAP00000018083	782 (aa)	XP_005390370	UPI00038E997F
ENSCLAT00000018260	CPSF2-201	6409	-	ENSCLAP00000018082	790 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000012404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012404	CPSF2	100	99.616	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSCLAG00000012404	CPSF2	100	85.932	ENSAPOG00000001242	cpsf2	100	85.932	Acanthochromis_polyacanthus
ENSCLAG00000012404	CPSF2	100	86.329	ENSACIG00000009331	cpsf2	100	86.329	Amphilophus_citrinellus
ENSCLAG00000012404	CPSF2	100	86.058	ENSAOCG00000014095	cpsf2	100	86.058	Amphiprion_ocellaris
ENSCLAG00000012404	CPSF2	100	86.058	ENSAPEG00000009158	cpsf2	100	86.058	Amphiprion_percula
ENSCLAG00000012404	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSCLAG00000012404	CPSF2	100	96.051	ENSAPLG00000006330	CPSF2	100	96.051	Anas_platyrhynchos
ENSCLAG00000012404	CPSF2	100	95.019	ENSACAG00000009245	CPSF2	100	95.019	Anolis_carolinensis
ENSCLAG00000012404	CPSF2	100	99.616	ENSANAG00000022915	CPSF2	100	99.616	Aotus_nancymaae
ENSCLAG00000012404	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSCLAG00000012404	CPSF2	100	99.616	ENSBTAG00000010227	CPSF2	100	99.616	Bos_taurus
ENSCLAG00000012404	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	41.032	Caenorhabditis_elegans
ENSCLAG00000012404	CPSF2	100	99.616	ENSCJAG00000018069	CPSF2	100	99.616	Callithrix_jacchus
ENSCLAG00000012404	CPSF2	100	99.744	ENSCAFG00000010909	CPSF2	100	99.744	Canis_familiaris
ENSCLAG00000012404	CPSF2	100	99.744	ENSCAFG00020020670	CPSF2	100	99.744	Canis_lupus_dingo
ENSCLAG00000012404	CPSF2	100	99.616	ENSCHIG00000023848	CPSF2	100	99.616	Capra_hircus
ENSCLAG00000012404	CPSF2	100	98.465	ENSTSYG00000009036	CPSF2	100	98.465	Carlito_syrichta
ENSCLAG00000012404	CPSF2	100	99.872	ENSCPOG00000010899	CPSF2	100	99.872	Cavia_porcellus
ENSCLAG00000012404	CPSF2	100	99.616	ENSCCAG00000028088	CPSF2	100	99.616	Cebus_capucinus
ENSCLAG00000012404	CPSF2	100	99.744	ENSCATG00000030132	CPSF2	100	99.744	Cercocebus_atys
ENSCLAG00000012404	CPSF2	100	99.744	ENSCSAG00000011300	CPSF2	100	99.744	Chlorocebus_sabaeus
ENSCLAG00000012404	CPSF2	100	92.583	ENSCHOG00000012904	CPSF2	100	92.583	Choloepus_hoffmanni
ENSCLAG00000012404	CPSF2	100	96.424	ENSCPBG00000008766	CPSF2	97	96.424	Chrysemys_picta_bellii
ENSCLAG00000012404	CPSF2	100	54.795	ENSCING00000007881	-	100	54.421	Ciona_intestinalis
ENSCLAG00000012404	CPSF2	94	99.727	ENSCANG00000041651	CPSF2	100	99.727	Colobus_angolensis_palliatus
ENSCLAG00000012404	CPSF2	100	98.593	ENSCGRG00001006901	Cpsf2	100	98.593	Cricetulus_griseus_chok1gshd
ENSCLAG00000012404	CPSF2	100	98.593	ENSCGRG00000012416	Cpsf2	100	98.593	Cricetulus_griseus_crigri
ENSCLAG00000012404	CPSF2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSCLAG00000012404	CPSF2	100	85.425	ENSCVAG00000000095	cpsf2	100	85.551	Cyprinodon_variegatus
ENSCLAG00000012404	CPSF2	100	85.841	ENSDARG00000028971	cpsf2	100	85.841	Danio_rerio
ENSCLAG00000012404	CPSF2	100	99.616	ENSDNOG00000042757	CPSF2	100	99.616	Dasypus_novemcinctus
ENSCLAG00000012404	CPSF2	100	99.488	ENSDORG00000013709	Cpsf2	100	99.488	Dipodomys_ordii
ENSCLAG00000012404	CPSF2	100	53.798	FBgn0027873	Cpsf100	100	53.808	Drosophila_melanogaster
ENSCLAG00000012404	CPSF2	100	90.421	ENSETEG00000012123	CPSF2	100	90.421	Echinops_telfairi
ENSCLAG00000012404	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSCLAG00000012404	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSCLAG00000012404	CPSF2	100	99.616	ENSECAG00000023935	CPSF2	100	99.616	Equus_caballus
ENSCLAG00000012404	CPSF2	100	84.065	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSCLAG00000012404	CPSF2	100	99.616	ENSFCAG00000007886	CPSF2	100	99.616	Felis_catus
ENSCLAG00000012404	CPSF2	100	96.296	ENSFALG00000002412	CPSF2	100	96.296	Ficedula_albicollis
ENSCLAG00000012404	CPSF2	100	99.744	ENSFDAG00000006327	CPSF2	100	99.744	Fukomys_damarensis
ENSCLAG00000012404	CPSF2	96	84.575	ENSFHEG00000015465	cpsf2	99	85.248	Fundulus_heteroclitus
ENSCLAG00000012404	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSCLAG00000012404	CPSF2	100	95.530	ENSGALG00000010783	CPSF2	100	96.041	Gallus_gallus
ENSCLAG00000012404	CPSF2	100	85.678	ENSGAFG00000001407	cpsf2	100	85.678	Gambusia_affinis
ENSCLAG00000012404	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSCLAG00000012404	CPSF2	100	96.552	ENSGAGG00000008287	CPSF2	100	96.552	Gopherus_agassizii
ENSCLAG00000012404	CPSF2	100	99.616	ENSGGOG00000011799	CPSF2	100	99.616	Gorilla_gorilla
ENSCLAG00000012404	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSCLAG00000012404	CPSF2	100	99.616	ENSHGLG00000018311	CPSF2	100	99.616	Heterocephalus_glaber_female
ENSCLAG00000012404	CPSF2	100	99.616	ENSHGLG00100016460	CPSF2	100	99.616	Heterocephalus_glaber_male
ENSCLAG00000012404	CPSF2	100	84.791	ENSHCOG00000019527	cpsf2	98	84.791	Hippocampus_comes
ENSCLAG00000012404	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSCLAG00000012404	CPSF2	100	99.744	ENSSTOG00000009528	CPSF2	100	99.744	Ictidomys_tridecemlineatus
ENSCLAG00000012404	CPSF2	100	99.361	ENSJJAG00000017925	Cpsf2	100	99.361	Jaculus_jaculus
ENSCLAG00000012404	CPSF2	100	84.918	ENSKMAG00000019429	cpsf2	100	84.918	Kryptolebias_marmoratus
ENSCLAG00000012404	CPSF2	95	84.225	ENSLBEG00000011585	cpsf2	100	84.358	Labrus_bergylta
ENSCLAG00000012404	CPSF2	100	89.400	ENSLACG00000019024	CPSF2	100	89.911	Latimeria_chalumnae
ENSCLAG00000012404	CPSF2	100	87.833	ENSLOCG00000014102	cpsf2	100	87.833	Lepisosteus_oculatus
ENSCLAG00000012404	CPSF2	100	99.362	ENSLAFG00000004891	CPSF2	100	99.362	Loxodonta_africana
ENSCLAG00000012404	CPSF2	100	99.744	ENSMFAG00000041212	CPSF2	100	99.744	Macaca_fascicularis
ENSCLAG00000012404	CPSF2	100	99.744	ENSMMUG00000000699	CPSF2	100	99.744	Macaca_mulatta
ENSCLAG00000012404	CPSF2	100	99.744	ENSMNEG00000031584	CPSF2	100	99.744	Macaca_nemestrina
ENSCLAG00000012404	CPSF2	100	99.744	ENSMLEG00000029394	CPSF2	100	99.744	Mandrillus_leucophaeus
ENSCLAG00000012404	CPSF2	100	86.058	ENSMAMG00000004235	cpsf2	100	86.058	Mastacembelus_armatus
ENSCLAG00000012404	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSCLAG00000012404	CPSF2	100	95.536	ENSMGAG00000013122	CPSF2	100	96.046	Meleagris_gallopavo
ENSCLAG00000012404	CPSF2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
ENSCLAG00000012404	CPSF2	100	99.616	ENSMICG00000016441	CPSF2	100	99.616	Microcebus_murinus
ENSCLAG00000012404	CPSF2	100	98.593	ENSMOCG00000015372	Cpsf2	100	98.593	Microtus_ochrogaster
ENSCLAG00000012404	CPSF2	100	81.242	ENSMMOG00000015590	cpsf2	100	81.242	Mola_mola
ENSCLAG00000012404	CPSF2	100	98.977	ENSMODG00000002042	CPSF2	100	98.977	Monodelphis_domestica
ENSCLAG00000012404	CPSF2	100	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSCLAG00000012404	CPSF2	100	98.082	ENSMUSG00000041781	Cpsf2	100	98.082	Mus_musculus
ENSCLAG00000012404	CPSF2	100	98.338	MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	Mus_pahari
ENSCLAG00000012404	CPSF2	100	98.082	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	Mus_spretus
ENSCLAG00000012404	CPSF2	100	99.744	ENSMPUG00000007617	CPSF2	98	99.744	Mustela_putorius_furo
ENSCLAG00000012404	CPSF2	100	98.977	ENSMLUG00000005570	CPSF2	100	98.977	Myotis_lucifugus
ENSCLAG00000012404	CPSF2	100	99.105	ENSNGAG00000020312	Cpsf2	100	99.105	Nannospalax_galili
ENSCLAG00000012404	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSCLAG00000012404	CPSF2	100	98.721	ENSNLEG00000017132	CPSF2	100	98.721	Nomascus_leucogenys
ENSCLAG00000012404	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSCLAG00000012404	CPSF2	94	91.803	ENSOPRG00000008484	-	100	91.803	Ochotona_princeps
ENSCLAG00000012404	CPSF2	100	99.488	ENSODEG00000008682	CPSF2	100	99.488	Octodon_degus
ENSCLAG00000012404	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSCLAG00000012404	CPSF2	100	98.593	ENSOANG00000003822	CPSF2	100	98.593	Ornithorhynchus_anatinus
ENSCLAG00000012404	CPSF2	100	99.361	ENSOCUG00000005713	CPSF2	100	99.361	Oryctolagus_cuniculus
ENSCLAG00000012404	CPSF2	100	80.101	ENSORLG00000011628	cpsf2	100	80.101	Oryzias_latipes
ENSCLAG00000012404	CPSF2	100	84.918	ENSORLG00020016980	cpsf2	100	84.918	Oryzias_latipes_hni
ENSCLAG00000012404	CPSF2	100	84.918	ENSORLG00015011910	cpsf2	100	84.918	Oryzias_latipes_hsok
ENSCLAG00000012404	CPSF2	100	84.284	ENSOMEG00000022876	cpsf2	100	84.284	Oryzias_melastigma
ENSCLAG00000012404	CPSF2	100	96.556	ENSOARG00000012889	CPSF2	100	96.556	Ovis_aries
ENSCLAG00000012404	CPSF2	100	99.616	ENSPPAG00000039666	CPSF2	100	99.616	Pan_paniscus
ENSCLAG00000012404	CPSF2	99	99.616	ENSPPRG00000010869	CPSF2	100	99.616	Panthera_pardus
ENSCLAG00000012404	CPSF2	100	99.616	ENSPTIG00000021202	CPSF2	100	99.616	Panthera_tigris_altaica
ENSCLAG00000012404	CPSF2	100	99.616	ENSPTRG00000006651	CPSF2	100	99.616	Pan_troglodytes
ENSCLAG00000012404	CPSF2	100	99.744	ENSPANG00000017417	CPSF2	100	99.744	Papio_anubis
ENSCLAG00000012404	CPSF2	100	81.957	ENSPKIG00000021453	cpsf2	100	81.957	Paramormyrops_kingsleyae
ENSCLAG00000012404	CPSF2	100	95.913	ENSPSIG00000006289	CPSF2	100	95.913	Pelodiscus_sinensis
ENSCLAG00000012404	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSCLAG00000012404	CPSF2	100	98.849	ENSPEMG00000007917	Cpsf2	100	98.849	Peromyscus_maniculatus_bairdii
ENSCLAG00000012404	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSCLAG00000012404	CPSF2	100	98.977	ENSPCIG00000011393	CPSF2	100	98.977	Phascolarctos_cinereus
ENSCLAG00000012404	CPSF2	100	85.551	ENSPFOG00000018648	cpsf2	100	85.551	Poecilia_formosa
ENSCLAG00000012404	CPSF2	100	85.551	ENSPLAG00000019199	cpsf2	99	85.551	Poecilia_latipinna
ENSCLAG00000012404	CPSF2	97	85.233	ENSPMEG00000012100	cpsf2	100	85.294	Poecilia_mexicana
ENSCLAG00000012404	CPSF2	100	85.425	ENSPREG00000008960	cpsf2	100	85.425	Poecilia_reticulata
ENSCLAG00000012404	CPSF2	63	99.395	ENSPPYG00000029685	-	100	99.395	Pongo_abelii
ENSCLAG00000012404	CPSF2	100	99.233	ENSPCAG00000012477	CPSF2	100	99.233	Procavia_capensis
ENSCLAG00000012404	CPSF2	100	99.616	ENSPCOG00000026387	CPSF2	100	99.616	Propithecus_coquereli
ENSCLAG00000012404	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSCLAG00000012404	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSCLAG00000012404	CPSF2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSCLAG00000012404	CPSF2	100	98.465	ENSRNOG00000005733	Cpsf2	100	98.465	Rattus_norvegicus
ENSCLAG00000012404	CPSF2	100	99.744	ENSRBIG00000044792	CPSF2	100	99.744	Rhinopithecus_bieti
ENSCLAG00000012404	CPSF2	100	99.744	ENSRROG00000034875	CPSF2	100	99.744	Rhinopithecus_roxellana
ENSCLAG00000012404	CPSF2	100	99.616	ENSSBOG00000024571	CPSF2	100	99.616	Saimiri_boliviensis_boliviensis
ENSCLAG00000012404	CPSF2	100	99.105	ENSSHAG00000010458	CPSF2	100	99.105	Sarcophilus_harrisii
ENSCLAG00000012404	CPSF2	100	87.294	ENSSFOG00015002117	cpsf2	100	87.294	Scleropages_formosus
ENSCLAG00000012404	CPSF2	100	84.157	ENSSMAG00000002001	cpsf2	100	84.157	Scophthalmus_maximus
ENSCLAG00000012404	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSCLAG00000012404	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSCLAG00000012404	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSCLAG00000012404	CPSF2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSCLAG00000012404	CPSF2	100	85.298	ENSSPAG00000013284	cpsf2	100	85.298	Stegastes_partitus
ENSCLAG00000012404	CPSF2	100	99.616	ENSSSCG00000002447	CPSF2	100	99.616	Sus_scrofa
ENSCLAG00000012404	CPSF2	100	96.424	ENSTGUG00000012571	-	100	96.424	Taeniopygia_guttata
ENSCLAG00000012404	CPSF2	100	84.664	ENSTRUG00000003742	cpsf2	100	84.664	Takifugu_rubripes
ENSCLAG00000012404	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSCLAG00000012404	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSCLAG00000012404	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSCLAG00000012404	CPSF2	100	99.872	ENSUAMG00000028071	CPSF2	100	99.872	Ursus_americanus
ENSCLAG00000012404	CPSF2	100	99.872	ENSUMAG00000005029	CPSF2	100	99.872	Ursus_maritimus
ENSCLAG00000012404	CPSF2	99	99.744	ENSVPAG00000003503	CPSF2	100	99.744	Vicugna_pacos
ENSCLAG00000012404	CPSF2	100	99.744	ENSVVUG00000024642	CPSF2	100	99.744	Vulpes_vulpes
ENSCLAG00000012404	CPSF2	100	92.082	ENSXETG00000010289	cpsf2	100	92.082	Xenopus_tropicalis
ENSCLAG00000012404	CPSF2	100	85.932	ENSXCOG00000001764	cpsf2	100	85.932	Xiphophorus_couchianus
ENSCLAG00000012404	CPSF2	100	86.058	ENSXMAG00000017048	cpsf2	100	86.058	Xiphophorus_maculatus