EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCLAG00000012423 (Gene tree)
Gene ID
102020094
Gene Symbol
PABPN1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Minus strand
Length
4232 bases
Position
chrJH721869.1:37000451-37004682
Accession
102020094
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000018118RRM_1PF00076.226.6e-1511
ENSCLAP00000018119RRM_1PF00076.228e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000018296PABPN1-201804XM_013510436ENSCLAP00000018118267 (aa)XP_013365890-
ENSCLAT00000018297PABPN1-202939-ENSCLAP00000018119312 (aa)--
Gene Model
Click here to download ENSCLAG00000012423's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012423's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000012423PABPN15798.026ENSG00000100836PABPN197100.000Homo_sapiens
ENSCLAG00000012423PABPN15681.457ENSAPOG00000016425pabpn16581.457Acanthochromis_polyacanthus
ENSCLAG00000012423PABPN15798.026ENSAMEG00000007048BCL2L2-PABPN18098.026Ailuropoda_melanoleuca
ENSCLAG00000012423PABPN15682.119ENSACIG00000021744pabpn18582.119Amphilophus_citrinellus
ENSCLAG00000012423PABPN15681.457ENSAOCG00000015805pabpn16581.457Amphiprion_ocellaris
ENSCLAG00000012423PABPN15681.457ENSAPEG00000009623pabpn16581.457Amphiprion_percula
ENSCLAG00000012423PABPN15682.119ENSATEG00000020531pabpn16582.119Anabas_testudineus
ENSCLAG00000012423PABPN15788.889ENSACAG00000006185-5488.889Anolis_carolinensis
ENSCLAG00000012423PABPN15790.303ENSANAG00000024513-7480.000Aotus_nancymaae
ENSCLAG00000012423PABPN15576.667ENSACLG00000016374pabpn16957.895Astatotilapia_calliptera
ENSCLAG00000012423PABPN15683.444ENSAMXG00000000452pabpn18583.444Astyanax_mexicanus
ENSCLAG00000012423PABPN15782.895ENSBTAG00000050594-7267.647Bos_taurus
ENSCLAG00000012423PABPN15796.053ENSBTAG00000053753-5796.053Bos_taurus
ENSCLAG00000012423PABPN16279.902ENSBTAG00000006884PABPN16779.902Bos_taurus
ENSCLAG00000012423PABPN15790.303ENSCJAG00000007960-7680.000Callithrix_jacchus
ENSCLAG00000012423PABPN15796.053ENSCJAG00000004407-7696.053Callithrix_jacchus
ENSCLAG00000012423PABPN17179.221ENSCAFG00000011482PABPN16780.000Canis_familiaris
ENSCLAG00000012423PABPN16280.000ENSCAFG00020007298-6780.000Canis_lupus_dingo
ENSCLAG00000012423PABPN16280.000ENSCAFG00020006651-6780.000Canis_lupus_dingo
ENSCLAG00000012423PABPN16280.000ENSCHIG00000012184PABPN16780.000Capra_hircus
ENSCLAG00000012423PABPN15798.026ENSTSYG00000033996BCL2L2-PABPN18598.026Carlito_syrichta
ENSCLAG00000012423PABPN152100.000ENSCAPG00000009461-99100.000Cavia_aperea
ENSCLAG00000012423PABPN16581.132ENSCPOG00000025574PABPN16780.976Cavia_porcellus
ENSCLAG00000012423PABPN15790.303ENSCCAG00000033954BCL2L2-PABPN17680.000Cebus_capucinus
ENSCLAG00000012423PABPN15798.026ENSCATG00000038536BCL2L2-PABPN17680.000Cercocebus_atys
ENSCLAG00000012423PABPN16279.024ENSCSAG00000016036PABPN16779.024Chlorocebus_sabaeus
ENSCLAG00000012423PABPN15788.158ENSCHOG00000004798BCL2L2-PABPN16688.158Choloepus_hoffmanni
ENSCLAG00000012423PABPN15790.132ENSCPBG00000026060-8590.132Chrysemys_picta_bellii
ENSCLAG00000012423PABPN15462.069ENSCING00000012468-8346.512Ciona_intestinalis
ENSCLAG00000012423PABPN15459.310ENSCSAVG00000002001-8062.759Ciona_savignyi
ENSCLAG00000012423PABPN15798.026ENSCANG00000009750BCL2L2-PABPN18598.026Colobus_angolensis_palliatus
ENSCLAG00000012423PABPN19670.035ENSCANG00000030980-7471.875Colobus_angolensis_palliatus
ENSCLAG00000012423PABPN19180.071ENSCGRG00001019696Pabpn18597.368Cricetulus_griseus_chok1gshd
ENSCLAG00000012423PABPN15797.368ENSCGRG00000011102Pabpn18597.368Cricetulus_griseus_crigri
ENSCLAG00000012423PABPN17058.850ENSCSEG00000008774pabpn16581.457Cynoglossus_semilaevis
ENSCLAG00000012423PABPN15677.483ENSCVAG00000003152pabpn16580.132Cyprinodon_variegatus
ENSCLAG00000012423PABPN15282.734ENSDARG00000045373pabpn19158.696Danio_rerio
ENSCLAG00000012423PABPN16280.000ENSDNOG00000023682PABPN16780.000Dasypus_novemcinctus
ENSCLAG00000012423PABPN16280.488ENSDORG00000028966-6780.488Dipodomys_ordii
ENSCLAG00000012423PABPN16157.669FBgn0005648Pabp27057.669Drosophila_melanogaster
ENSCLAG00000012423PABPN15678.146ENSEBUG00000002322pabpn16578.146Eptatretus_burgeri
ENSCLAG00000012423PABPN16280.000ENSEASG00005011716PABPN16780.000Equus_asinus_asinus
ENSCLAG00000012423PABPN16972.273ENSECAG00000011652PABPN16578.756Equus_caballus
ENSCLAG00000012423PABPN19276.056ENSEEUG00000012973-7074.146Erinaceus_europaeus
ENSCLAG00000012423PABPN15685.430ENSELUG00000022654pabpn16485.430Esox_lucius
ENSCLAG00000012423PABPN16280.000ENSFCAG00000031922PABPN16780.000Felis_catus
ENSCLAG00000012423PABPN15798.026ENSFDAG00000018381BCL2L2-PABPN18598.026Fukomys_damarensis
ENSCLAG00000012423PABPN15675.333ENSFHEG00000007215pabpn18756.710Fundulus_heteroclitus
ENSCLAG00000012423PABPN17158.696ENSGMOG00000003922pabpn17158.874Gadus_morhua
ENSCLAG00000012423PABPN15785.065ENSGALG00000052930-6070.388Gallus_gallus
ENSCLAG00000012423PABPN15681.579ENSGAFG00000017099pabpn16581.579Gambusia_affinis
ENSCLAG00000012423PABPN15676.543ENSGACG00000002167pabpn16676.543Gasterosteus_aculeatus
ENSCLAG00000012423PABPN15790.303ENSGGOG00000022683-7680.000Gorilla_gorilla
ENSCLAG00000012423PABPN19267.133ENSGGOG00000025919-9883.784Gorilla_gorilla
ENSCLAG00000012423PABPN19167.939ENSGGOG00000039675-5485.915Gorilla_gorilla
ENSCLAG00000012423PABPN15682.119ENSHBUG00000019523pabpn16582.119Haplochromis_burtoni
ENSCLAG00000012423PABPN17178.261ENSHGLG00000002927-68100.000Heterocephalus_glaber_female
ENSCLAG00000012423PABPN15774.342ENSHGLG00000009842-8374.342Heterocephalus_glaber_female
ENSCLAG00000012423PABPN19062.989ENSHGLG00000018588-6964.706Heterocephalus_glaber_female
ENSCLAG00000012423PABPN19059.786ENSHGLG00100015565-7064.706Heterocephalus_glaber_male
ENSCLAG00000012423PABPN15391.724ENSHGLG00100018935-8291.724Heterocephalus_glaber_male
ENSCLAG00000012423PABPN15798.684ENSHGLG00100006673-8598.684Heterocephalus_glaber_male
ENSCLAG00000012423PABPN15676.000ENSHCOG00000004655pabpn16580.795Hippocampus_comes
ENSCLAG00000012423PABPN15682.119ENSIPUG00000008085PABPN16582.119Ictalurus_punctatus
ENSCLAG00000012423PABPN15678.808ENSIPUG00000000180-6678.808Ictalurus_punctatus
ENSCLAG00000012423PABPN15798.026ENSSTOG00000029847BCL2L2-PABPN18598.026Ictidomys_tridecemlineatus
ENSCLAG00000012423PABPN15798.026ENSJJAG00000023507Gm205218598.026Jaculus_jaculus
ENSCLAG00000012423PABPN15680.921ENSKMAG00000018748pabpn16580.921Kryptolebias_marmoratus
ENSCLAG00000012423PABPN15682.119ENSLBEG00000027266pabpn16582.119Labrus_bergylta
ENSCLAG00000012423PABPN15383.099ENSLACG00000000646pabpn16187.857Latimeria_chalumnae
ENSCLAG00000012423PABPN18553.506ENSLOCG00000000796pabpn15083.453Lepisosteus_oculatus
ENSCLAG00000012423PABPN15567.347ENSLOCG00000004694pabpn1l9047.577Lepisosteus_oculatus
ENSCLAG00000012423PABPN15698.667ENSLAFG00000031227-9998.667Loxodonta_africana
ENSCLAG00000012423PABPN15392.199ENSMFAG00000031355-9992.199Macaca_fascicularis
ENSCLAG00000012423PABPN15798.026ENSMFAG00000032183BCL2L2-PABPN18598.026Macaca_fascicularis
ENSCLAG00000012423PABPN15798.026ENSMMUG00000014747BCL2L2-PABPN110099.315Macaca_mulatta
ENSCLAG00000012423PABPN19669.231ENSMMUG00000048382-6871.569Macaca_mulatta
ENSCLAG00000012423PABPN19670.611ENSMNEG00000035750-9992.199Macaca_nemestrina
ENSCLAG00000012423PABPN15798.026ENSMNEG00000045065BCL2L2-PABPN17680.000Macaca_nemestrina
ENSCLAG00000012423PABPN19670.863ENSMLEG00000034623-9990.071Mandrillus_leucophaeus
ENSCLAG00000012423PABPN15798.026ENSMLEG00000043862BCL2L2-PABPN18598.026Mandrillus_leucophaeus
ENSCLAG00000012423PABPN18553.818ENSMAMG00000007979pabpn15180.537Mastacembelus_armatus
ENSCLAG00000012423PABPN15282.014ENSMZEG00005011904pabpn17158.261Maylandia_zebra
ENSCLAG00000012423PABPN19180.071ENSMAUG00000007383Gm205216979.512Mesocricetus_auratus
ENSCLAG00000012423PABPN19171.530ENSMICG00000010002BCL2L2-PABPN17680.000Microcebus_murinus
ENSCLAG00000012423PABPN19179.715ENSMOCG00000018557Gm205216796.364Microtus_ochrogaster
ENSCLAG00000012423PABPN15682.781ENSMMOG00000005405pabpn16582.781Mola_mola
ENSCLAG00000012423PABPN16970.000ENSMODG00000004535-6676.733Monodelphis_domestica
ENSCLAG00000012423PABPN15282.014ENSMALG00000019612pabpn15180.537Monopterus_albus
ENSCLAG00000012423PABPN19179.004MGP_CAROLIEiJ_G0019277Pabpn18595.395Mus_caroli
ENSCLAG00000012423PABPN15795.395MGP_CAROLIEiJ_G0019276Gm205215369.458Mus_caroli
ENSCLAG00000012423PABPN15796.053ENSMUSG00000092232Gm205215369.951Mus_musculus
ENSCLAG00000012423PABPN19179.359ENSMUSG00000022194Pabpn18596.053Mus_musculus
ENSCLAG00000012423PABPN19179.359MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSCLAG00000012423PABPN15796.053MGP_PahariEiJ_G0030294Gm205215369.951Mus_pahari
ENSCLAG00000012423PABPN19179.359MGP_SPRETEiJ_G0020166Pabpn18596.053Mus_spretus
ENSCLAG00000012423PABPN15796.053MGP_SPRETEiJ_G0020165Gm205215369.951Mus_spretus
ENSCLAG00000012423PABPN15297.857ENSMPUG00000006775-8397.857Mustela_putorius_furo
ENSCLAG00000012423PABPN19468.702ENSMLUG00000028677-7575.610Myotis_lucifugus
ENSCLAG00000012423PABPN15797.368ENSMLUG00000003800-8097.368Myotis_lucifugus
ENSCLAG00000012423PABPN19172.887ENSMLUG00000012452-6873.913Myotis_lucifugus
ENSCLAG00000012423PABPN15798.026ENSNGAG00000019529Gm205215371.429Nannospalax_galili
ENSCLAG00000012423PABPN15682.119ENSNBRG00000023955pabpn18582.119Neolamprologus_brichardi
ENSCLAG00000012423PABPN15572.297ENSNLEG00000035292-9972.297Nomascus_leucogenys
ENSCLAG00000012423PABPN15798.026ENSNLEG00000015007-7380.000Nomascus_leucogenys
ENSCLAG00000012423PABPN19665.854ENSNLEG00000030598-7668.557Nomascus_leucogenys
ENSCLAG00000012423PABPN16481.395ENSODEG00000011555-8089.333Octodon_degus
ENSCLAG00000012423PABPN19173.260ENSODEG00000003739-6971.859Octodon_degus
ENSCLAG00000012423PABPN15798.684ENSODEG00000002083BCL2L2-PABPN16780.976Octodon_degus
ENSCLAG00000012423PABPN15282.014ENSONIG00000008112pabpn17158.261Oreochromis_niloticus
ENSCLAG00000012423PABPN15595.890ENSOANG00000009218-10095.890Ornithorhynchus_anatinus
ENSCLAG00000012423PABPN16279.512ENSOCUG00000016174PABPN17579.512Oryctolagus_cuniculus
ENSCLAG00000012423PABPN15282.734ENSORLG00000027900pabpn18359.292Oryzias_latipes
ENSCLAG00000012423PABPN16859.091ENSORLG00020004681pabpn15181.208Oryzias_latipes_hni
ENSCLAG00000012423PABPN15682.781ENSORLG00015000018pabpn16582.781Oryzias_latipes_hsok
ENSCLAG00000012423PABPN15282.014ENSOMEG00000016618pabpn17358.850Oryzias_melastigma
ENSCLAG00000012423PABPN16280.000ENSOGAG00000008710PABPN16780.000Otolemur_garnettii
ENSCLAG00000012423PABPN15798.026ENSPPAG00000028984BCL2L2-PABPN18397.857Pan_paniscus
ENSCLAG00000012423PABPN15781.579ENSPPAG00000039421-8481.579Pan_paniscus
ENSCLAG00000012423PABPN16280.000ENSPPRG00000010567PABPN16780.000Panthera_pardus
ENSCLAG00000012423PABPN15798.026ENSPTIG00000001063BCL2L2-PABPN18598.026Panthera_tigris_altaica
ENSCLAG00000012423PABPN19762.308ENSPTRG00000047273-5384.783Pan_troglodytes
ENSCLAG00000012423PABPN15798.026ENSPTRG00000006167BCL2L27680.000Pan_troglodytes
ENSCLAG00000012423PABPN19669.595ENSPANG00000023326-9992.199Papio_anubis
ENSCLAG00000012423PABPN15798.026ENSPANG00000021100BCL2L2-PABPN17680.000Papio_anubis
ENSCLAG00000012423PABPN15683.444ENSPKIG00000008144-5181.879Paramormyrops_kingsleyae
ENSCLAG00000012423PABPN15681.457ENSPKIG00000018052pabpn16581.457Paramormyrops_kingsleyae
ENSCLAG00000012423PABPN15564.626ENSPKIG00000008340pabpn1l8750.472Paramormyrops_kingsleyae
ENSCLAG00000012423PABPN18553.091ENSPMGG00000022027pabpn15181.295Periophthalmus_magnuspinnatus
ENSCLAG00000012423PABPN19180.071ENSPEMG00000008332Gm205216598.148Peromyscus_maniculatus_bairdii
ENSCLAG00000012423PABPN15955.612ENSPMAG00000006212pabpn16674.522Petromyzon_marinus
ENSCLAG00000012423PABPN16277.561ENSPCIG00000027751-6777.561Phascolarctos_cinereus
ENSCLAG00000012423PABPN15677.632ENSPFOG00000010351pabpn16480.263Poecilia_formosa
ENSCLAG00000012423PABPN15280.714ENSPLAG00000022696pabpn15179.333Poecilia_latipinna
ENSCLAG00000012423PABPN15677.632ENSPMEG00000020856pabpn16580.263Poecilia_mexicana
ENSCLAG00000012423PABPN15677.632ENSPREG00000011278pabpn16580.263Poecilia_reticulata
ENSCLAG00000012423PABPN18481.679ENSPPYG00000005663PABPN16978.756Pongo_abelii
ENSCLAG00000012423PABPN16859.910ENSPCAG00000005902PABPN19273.897Procavia_capensis
ENSCLAG00000012423PABPN19171.530ENSPCOG00000028047BCL2L2-PABPN17680.000Propithecus_coquereli
ENSCLAG00000012423PABPN16476.303ENSPVAG00000005270PABPN16777.451Pteropus_vampyrus
ENSCLAG00000012423PABPN15682.119ENSPNYG00000013182pabpn16582.119Pundamilia_nyererei
ENSCLAG00000012423PABPN15566.438ENSPNAG00000021666pabpn1l6868.707Pygocentrus_nattereri
ENSCLAG00000012423PABPN15683.444ENSPNAG00000023526pabpn16583.444Pygocentrus_nattereri
ENSCLAG00000012423PABPN19179.715ENSRNOG00000042195Pabpn16879.024Rattus_norvegicus
ENSCLAG00000012423PABPN19768.151ENSRBIG00000039547-7573.958Rhinopithecus_bieti
ENSCLAG00000012423PABPN19072.727ENSRBIG00000042811-8572.000Rhinopithecus_bieti
ENSCLAG00000012423PABPN19069.091ENSRROG00000036409-6367.500Rhinopithecus_roxellana
ENSCLAG00000012423PABPN15798.026ENSRROG00000045535BCL2L2-PABPN18598.026Rhinopithecus_roxellana
ENSCLAG00000012423PABPN19967.568ENSRROG00000040409-7574.479Rhinopithecus_roxellana
ENSCLAG00000012423PABPN15297.857ENSSBOG00000026930BCL2L2-PABPN18397.857Saimiri_boliviensis_boliviensis
ENSCLAG00000012423PABPN15794.737ENSSHAG00000014841-6996.000Sarcophilus_harrisii
ENSCLAG00000012423PABPN18555.472ENSSHAG00000007707-8762.439Sarcophilus_harrisii
ENSCLAG00000012423PABPN15564.384ENSSFOG00015015833pabpn1l8649.091Scleropages_formosus
ENSCLAG00000012423PABPN15681.457ENSSFOG00015012565pabpn16881.457Scleropages_formosus
ENSCLAG00000012423PABPN15680.795ENSSFOG00015014718pabpn16580.795Scleropages_formosus
ENSCLAG00000012423PABPN15682.119ENSSMAG00000020157pabpn16582.119Scophthalmus_maximus
ENSCLAG00000012423PABPN15282.014ENSSDUG00000020582pabpn15180.537Seriola_dumerili
ENSCLAG00000012423PABPN15682.119ENSSLDG00000007118pabpn16582.119Seriola_lalandi_dorsalis
ENSCLAG00000012423PABPN15788.816ENSSPUG00000018308-8588.816Sphenodon_punctatus
ENSCLAG00000012423PABPN15682.119ENSSPAG00000021658pabpn16582.119Stegastes_partitus
ENSCLAG00000012423PABPN16962.673ENSSSCG00000034805-7661.616Sus_scrofa
ENSCLAG00000012423PABPN16846.961ENSSSCG00000038472-7162.376Sus_scrofa
ENSCLAG00000012423PABPN15798.026ENSSSCG00000002023PABPN16780.000Sus_scrofa
ENSCLAG00000012423PABPN15682.119ENSTRUG00000023664pabpn16582.119Takifugu_rubripes
ENSCLAG00000012423PABPN15677.632ENSTNIG00000005369pabpn18859.910Tetraodon_nigroviridis
ENSCLAG00000012423PABPN16280.000ENSUAMG00000024460PABPN16780.000Ursus_americanus
ENSCLAG00000012423PABPN15798.026ENSUMAG00000014288BCL2L2-PABPN15371.429Ursus_maritimus
ENSCLAG00000012423PABPN15798.026ENSVVUG00000019912BCL2L2-PABPN16098.026Vulpes_vulpes
ENSCLAG00000012423PABPN15688.000ENSXETG00000014597pabpn15091.333Xenopus_tropicalis
ENSCLAG00000012423PABPN15877.564ENSXCOG00000005158pabpn19280.128Xiphophorus_couchianus
ENSCLAG00000012423PABPN15678.289ENSXMAG00000006196pabpn16580.921Xiphophorus_maculatus

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