EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000012442 (Gene tree)
Gene ID: 102015006
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 10937 bases
Position: chrJH721875.1:13520530-13531466
Accession: 102015006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018141	LSM	PF01423.22	6.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018320	SNRPB-201	3809	XM_005380752	ENSCLAP00000018141	237 (aa)	XP_005380809	UPI00035134F1

Gene Model

Click here to download ENSCLAG00000012442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000012442	SNRPB	93	92.760	ENSCLAG00000011376	SNRPN	92	92.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012442	SNRPB	100	98.750	ENSG00000125835	SNRPB	100	98.750	Homo_sapiens
ENSCLAG00000012442	SNRPB	76	92.818	ENSAPOG00000019606	snrpb	56	94.643	Acanthochromis_polyacanthus
ENSCLAG00000012442	SNRPB	99	98.745	ENSAMEG00000011353	SNRPB	98	98.745	Ailuropoda_melanoleuca
ENSCLAG00000012442	SNRPB	74	92.000	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSCLAG00000012442	SNRPB	76	92.818	ENSAOCG00000006876	snrpb	69	94.643	Amphiprion_ocellaris
ENSCLAG00000012442	SNRPB	76	92.818	ENSAPEG00000021585	snrpb	71	94.643	Amphiprion_percula
ENSCLAG00000012442	SNRPB	76	92.265	ENSATEG00000009836	snrpb	69	94.048	Anabas_testudineus
ENSCLAG00000012442	SNRPB	90	95.305	ENSACAG00000002053	SNRPB	92	95.305	Anolis_carolinensis
ENSCLAG00000012442	SNRPB	91	93.488	ENSANAG00000036271	-	76	93.122	Aotus_nancymaae
ENSCLAG00000012442	SNRPB	100	98.750	ENSANAG00000024443	-	100	98.750	Aotus_nancymaae
ENSCLAG00000012442	SNRPB	76	92.818	ENSACLG00000014707	snrpb	69	94.643	Astatotilapia_calliptera
ENSCLAG00000012442	SNRPB	77	92.896	ENSAMXG00000029434	snrpb	70	94.048	Astyanax_mexicanus
ENSCLAG00000012442	SNRPB	95	99.558	ENSBTAG00000001038	SNRPB	98	99.558	Bos_taurus
ENSCLAG00000012442	SNRPB	90	92.056	ENSCJAG00000023097	-	79	92.063	Callithrix_jacchus
ENSCLAG00000012442	SNRPB	95	100.000	ENSCJAG00000020971	-	98	100.000	Callithrix_jacchus
ENSCLAG00000012442	SNRPB	79	88.421	ENSCAFG00000031109	-	79	84.737	Canis_familiaris
ENSCLAG00000012442	SNRPB	95	100.000	ENSCAFG00000006693	-	98	100.000	Canis_familiaris
ENSCLAG00000012442	SNRPB	100	98.750	ENSCAFG00020016981	-	100	98.750	Canis_lupus_dingo
ENSCLAG00000012442	SNRPB	95	99.558	ENSCHIG00000025449	-	98	99.558	Capra_hircus
ENSCLAG00000012442	SNRPB	95	76.889	ENSTSYG00000032303	-	55	79.333	Carlito_syrichta
ENSCLAG00000012442	SNRPB	95	100.000	ENSTSYG00000014498	-	98	100.000	Carlito_syrichta
ENSCLAG00000012442	SNRPB	99	98.745	ENSCAPG00000012669	SNRPB	98	100.000	Cavia_aperea
ENSCLAG00000012442	SNRPB	95	100.000	ENSCPOG00000039408	SNRPB	98	100.000	Cavia_porcellus
ENSCLAG00000012442	SNRPB	54	88.189	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSCLAG00000012442	SNRPB	100	98.750	ENSCCAG00000026002	SNRPB	100	98.750	Cebus_capucinus
ENSCLAG00000012442	SNRPB	95	100.000	ENSCATG00000030230	SNRPB	98	100.000	Cercocebus_atys
ENSCLAG00000012442	SNRPB	95	100.000	ENSCSAG00000010840	SNRPB	98	100.000	Chlorocebus_sabaeus
ENSCLAG00000012442	SNRPB	100	95.417	ENSCPBG00000026801	SNRPB	100	95.417	Chrysemys_picta_bellii
ENSCLAG00000012442	SNRPB	100	98.750	ENSCANG00000019461	SNRPB	100	98.750	Colobus_angolensis_palliatus
ENSCLAG00000012442	SNRPB	95	100.000	ENSCGRG00001023046	Snrpb	98	100.000	Cricetulus_griseus_chok1gshd
ENSCLAG00000012442	SNRPB	92	100.000	ENSCGRG00000010423	Snrpb	97	100.000	Cricetulus_griseus_crigri
ENSCLAG00000012442	SNRPB	77	92.350	ENSCSEG00000020328	snrpb	70	94.643	Cynoglossus_semilaevis
ENSCLAG00000012442	SNRPB	71	92.857	ENSDARG00000011125	snrpb	69	94.643	Danio_rerio
ENSCLAG00000012442	SNRPB	100	98.750	ENSDNOG00000015545	-	100	98.750	Dasypus_novemcinctus
ENSCLAG00000012442	SNRPB	73	94.220	ENSDNOG00000007896	-	71	94.220	Dasypus_novemcinctus
ENSCLAG00000012442	SNRPB	96	98.261	ENSDORG00000029558	Snrpb	100	98.261	Dipodomys_ordii
ENSCLAG00000012442	SNRPB	63	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSCLAG00000012442	SNRPB	77	78.689	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSCLAG00000012442	SNRPB	76	80.108	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSCLAG00000012442	SNRPB	95	99.558	ENSEASG00005012991	SNRPB	98	99.558	Equus_asinus_asinus
ENSCLAG00000012442	SNRPB	95	100.000	ENSECAG00000011944	SNRPB	98	100.000	Equus_caballus
ENSCLAG00000012442	SNRPB	95	100.000	ENSEEUG00000015568	SNRPB	80	100.000	Erinaceus_europaeus
ENSCLAG00000012442	SNRPB	61	95.862	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSCLAG00000012442	SNRPB	95	100.000	ENSFCAG00000034090	-	98	100.000	Felis_catus
ENSCLAG00000012442	SNRPB	97	94.828	ENSFALG00000004866	SNRPB	100	94.828	Ficedula_albicollis
ENSCLAG00000012442	SNRPB	99	98.745	ENSFDAG00000009937	SNRPB	98	100.000	Fukomys_damarensis
ENSCLAG00000012442	SNRPB	100	95.000	ENSGALG00000035421	SNRPN	100	95.000	Gallus_gallus
ENSCLAG00000012442	SNRPB	73	93.023	ENSGAFG00000019558	snrpb	72	94.012	Gambusia_affinis
ENSCLAG00000012442	SNRPB	77	91.257	ENSGACG00000003262	snrpb	70	94.643	Gasterosteus_aculeatus
ENSCLAG00000012442	SNRPB	100	95.417	ENSGAGG00000001308	SNRPB	100	95.417	Gopherus_agassizii
ENSCLAG00000012442	SNRPB	95	100.000	ENSGGOG00000016138	SNRPB	98	100.000	Gorilla_gorilla
ENSCLAG00000012442	SNRPB	76	92.818	ENSHBUG00000008369	snrpb	69	94.643	Haplochromis_burtoni
ENSCLAG00000012442	SNRPB	95	100.000	ENSHGLG00000016241	-	98	100.000	Heterocephalus_glaber_female
ENSCLAG00000012442	SNRPB	63	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSCLAG00000012442	SNRPB	63	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSCLAG00000012442	SNRPB	100	98.750	ENSHGLG00100012877	-	100	98.750	Heterocephalus_glaber_male
ENSCLAG00000012442	SNRPB	77	92.350	ENSHCOG00000014888	snrpb	70	94.643	Hippocampus_comes
ENSCLAG00000012442	SNRPB	71	92.857	ENSIPUG00000024569	SNRPB	70	94.643	Ictalurus_punctatus
ENSCLAG00000012442	SNRPB	91	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSCLAG00000012442	SNRPB	100	97.083	ENSSTOG00000033664	-	100	97.083	Ictidomys_tridecemlineatus
ENSCLAG00000012442	SNRPB	95	100.000	ENSJJAG00000024170	Snrpb	98	100.000	Jaculus_jaculus
ENSCLAG00000012442	SNRPB	73	94.220	ENSKMAG00000014494	snrpb	68	95.238	Kryptolebias_marmoratus
ENSCLAG00000012442	SNRPB	77	92.350	ENSLBEG00000005678	snrpb	70	94.643	Labrus_bergylta
ENSCLAG00000012442	SNRPB	93	93.213	ENSLACG00000011459	SNRPB	92	93.213	Latimeria_chalumnae
ENSCLAG00000012442	SNRPB	71	94.048	ENSLOCG00000002687	snrpb	70	95.238	Lepisosteus_oculatus
ENSCLAG00000012442	SNRPB	95	96.000	ENSLAFG00000017588	SNRPB	97	96.000	Loxodonta_africana
ENSCLAG00000012442	SNRPB	95	100.000	ENSMFAG00000038756	SNRPB	98	100.000	Macaca_fascicularis
ENSCLAG00000012442	SNRPB	95	100.000	ENSMMUG00000010050	SNRPB	98	100.000	Macaca_mulatta
ENSCLAG00000012442	SNRPB	95	100.000	ENSMNEG00000027954	SNRPB	98	100.000	Macaca_nemestrina
ENSCLAG00000012442	SNRPB	100	98.750	ENSMLEG00000022346	SNRPB	100	98.750	Mandrillus_leucophaeus
ENSCLAG00000012442	SNRPB	76	92.778	ENSMAMG00000009294	snrpb	67	94.611	Mastacembelus_armatus
ENSCLAG00000012442	SNRPB	76	92.818	ENSMZEG00005011856	snrpb	69	94.643	Maylandia_zebra
ENSCLAG00000012442	SNRPB	97	84.348	ENSMICG00000015983	-	87	89.947	Microcebus_murinus
ENSCLAG00000012442	SNRPB	95	99.558	ENSMICG00000016519	SNRPB	98	99.558	Microcebus_murinus
ENSCLAG00000012442	SNRPB	70	70.060	ENSMOCG00000021362	-	72	73.410	Microtus_ochrogaster
ENSCLAG00000012442	SNRPB	95	99.558	ENSMOCG00000002892	-	98	99.558	Microtus_ochrogaster
ENSCLAG00000012442	SNRPB	77	92.308	ENSMMOG00000013226	snrpb	71	94.611	Mola_mola
ENSCLAG00000012442	SNRPB	76	92.265	ENSMALG00000020839	snrpb	56	94.048	Monopterus_albus
ENSCLAG00000012442	SNRPB	95	99.558	MGP_CAROLIEiJ_G0024293	Snrpb	98	99.558	Mus_caroli
ENSCLAG00000012442	SNRPB	95	99.558	ENSMUSG00000027404	Snrpb	98	99.558	Mus_musculus
ENSCLAG00000012442	SNRPB	95	99.558	MGP_PahariEiJ_G0025738	Snrpb	98	99.558	Mus_pahari
ENSCLAG00000012442	SNRPB	95	99.558	MGP_SPRETEiJ_G0025213	Snrpb	98	99.558	Mus_spretus
ENSCLAG00000012442	SNRPB	95	100.000	ENSMPUG00000009283	SNRPB	98	100.000	Mustela_putorius_furo
ENSCLAG00000012442	SNRPB	100	95.417	ENSMLUG00000016951	SNRPB	100	95.417	Myotis_lucifugus
ENSCLAG00000012442	SNRPB	95	100.000	ENSNGAG00000012051	Snrpb	98	100.000	Nannospalax_galili
ENSCLAG00000012442	SNRPB	76	90.055	ENSNBRG00000006353	snrpb	62	93.293	Neolamprologus_brichardi
ENSCLAG00000012442	SNRPB	100	98.750	ENSNLEG00000029067	SNRPB	100	98.750	Nomascus_leucogenys
ENSCLAG00000012442	SNRPB	95	97.333	ENSMEUG00000015625	SNRPB	100	97.333	Notamacropus_eugenii
ENSCLAG00000012442	SNRPB	100	96.624	ENSODEG00000016060	-	100	96.624	Octodon_degus
ENSCLAG00000012442	SNRPB	95	100.000	ENSODEG00000004305	-	98	100.000	Octodon_degus
ENSCLAG00000012442	SNRPB	76	92.818	ENSONIG00000000248	snrpb	69	94.643	Oreochromis_niloticus
ENSCLAG00000012442	SNRPB	91	94.884	ENSOCUG00000021456	-	78	95.767	Oryctolagus_cuniculus
ENSCLAG00000012442	SNRPB	90	71.831	ENSOCUG00000026813	-	63	70.946	Oryctolagus_cuniculus
ENSCLAG00000012442	SNRPB	100	95.833	ENSOCUG00000028215	-	100	95.833	Oryctolagus_cuniculus
ENSCLAG00000012442	SNRPB	100	98.333	ENSOCUG00000014042	-	100	98.333	Oryctolagus_cuniculus
ENSCLAG00000012442	SNRPB	76	93.296	ENSOCUG00000022423	-	86	96.429	Oryctolagus_cuniculus
ENSCLAG00000012442	SNRPB	76	92.265	ENSORLG00000021862	snrpb	69	94.643	Oryzias_latipes
ENSCLAG00000012442	SNRPB	100	98.750	ENSOGAG00000016149	SNRPB	100	98.750	Otolemur_garnettii
ENSCLAG00000012442	SNRPB	95	99.558	ENSOARG00000006740	SNRPB	98	99.558	Ovis_aries
ENSCLAG00000012442	SNRPB	95	100.000	ENSPPAG00000036314	SNRPB	98	100.000	Pan_paniscus
ENSCLAG00000012442	SNRPB	100	98.750	ENSPPRG00000003233	-	100	98.750	Panthera_pardus
ENSCLAG00000012442	SNRPB	99	98.745	ENSPTIG00000007468	SNRPB	99	98.745	Panthera_tigris_altaica
ENSCLAG00000012442	SNRPB	95	100.000	ENSPTRG00000013176	SNRPB	98	100.000	Pan_troglodytes
ENSCLAG00000012442	SNRPB	100	98.750	ENSPANG00000020362	SNRPB	100	98.750	Papio_anubis
ENSCLAG00000012442	SNRPB	71	92.262	ENSPKIG00000002865	snrpb	70	94.048	Paramormyrops_kingsleyae
ENSCLAG00000012442	SNRPB	99	95.397	ENSPSIG00000014125	SNRPB	98	95.397	Pelodiscus_sinensis
ENSCLAG00000012442	SNRPB	75	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSCLAG00000012442	SNRPB	95	100.000	ENSPEMG00000007948	Snrpb	98	100.000	Peromyscus_maniculatus_bairdii
ENSCLAG00000012442	SNRPB	99	96.653	ENSPCIG00000004694	SNRPB	99	96.653	Phascolarctos_cinereus
ENSCLAG00000012442	SNRPB	80	76.842	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSCLAG00000012442	SNRPB	95	100.000	ENSPPYG00000010841	SNRPB	98	100.000	Pongo_abelii
ENSCLAG00000012442	SNRPB	95	100.000	ENSPCOG00000013686	SNRPB	98	100.000	Propithecus_coquereli
ENSCLAG00000012442	SNRPB	95	99.115	ENSPVAG00000017013	SNRPB	79	99.115	Pteropus_vampyrus
ENSCLAG00000012442	SNRPB	76	92.818	ENSPNYG00000014788	snrpb	69	94.643	Pundamilia_nyererei
ENSCLAG00000012442	SNRPB	77	92.896	ENSPNAG00000016126	snrpb	70	94.643	Pygocentrus_nattereri
ENSCLAG00000012442	SNRPB	95	100.000	ENSRNOG00000006961	Snrpb	98	100.000	Rattus_norvegicus
ENSCLAG00000012442	SNRPB	100	98.333	ENSRBIG00000040505	SNRPB	100	98.333	Rhinopithecus_bieti
ENSCLAG00000012442	SNRPB	100	98.750	ENSRROG00000036094	SNRPB	100	98.750	Rhinopithecus_roxellana
ENSCLAG00000012442	SNRPB	100	98.750	ENSSBOG00000027310	SNRPB	100	98.750	Saimiri_boliviensis_boliviensis
ENSCLAG00000012442	SNRPB	100	97.083	ENSSHAG00000010394	SNRPB	100	97.083	Sarcophilus_harrisii
ENSCLAG00000012442	SNRPB	71	92.262	ENSSFOG00015002870	snrpb	70	93.452	Scleropages_formosus
ENSCLAG00000012442	SNRPB	77	91.803	ENSSMAG00000006766	snrpb	70	94.048	Scophthalmus_maximus
ENSCLAG00000012442	SNRPB	76	92.818	ENSSDUG00000018539	snrpb	69	94.643	Seriola_dumerili
ENSCLAG00000012442	SNRPB	76	92.818	ENSSLDG00000022391	snrpb	69	94.643	Seriola_lalandi_dorsalis
ENSCLAG00000012442	SNRPB	73	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSCLAG00000012442	SNRPB	99	95.397	ENSSPUG00000015659	SNRPB	100	95.397	Sphenodon_punctatus
ENSCLAG00000012442	SNRPB	76	92.818	ENSSPAG00000021992	snrpb	69	94.643	Stegastes_partitus
ENSCLAG00000012442	SNRPB	89	79.245	ENSSSCG00000011966	-	91	75.943	Sus_scrofa
ENSCLAG00000012442	SNRPB	95	99.558	ENSSSCG00000040857	-	98	99.558	Sus_scrofa
ENSCLAG00000012442	SNRPB	75	79.661	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSCLAG00000012442	SNRPB	77	91.803	ENSTRUG00000023094	snrpb	72	94.048	Takifugu_rubripes
ENSCLAG00000012442	SNRPB	77	91.803	ENSTNIG00000002991	snrpb	70	94.048	Tetraodon_nigroviridis
ENSCLAG00000012442	SNRPB	71	100.000	ENSUAMG00000005984	-	83	100.000	Ursus_americanus
ENSCLAG00000012442	SNRPB	58	99.270	ENSUMAG00000002123	-	64	97.842	Ursus_maritimus
ENSCLAG00000012442	SNRPB	62	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSCLAG00000012442	SNRPB	100	77.637	ENSVVUG00000010086	-	85	81.122	Vulpes_vulpes
ENSCLAG00000012442	SNRPB	100	98.333	ENSVVUG00000025654	-	100	98.333	Vulpes_vulpes
ENSCLAG00000012442	SNRPB	80	95.767	ENSXETG00000027266	snrpb	67	95.767	Xenopus_tropicalis
ENSCLAG00000012442	SNRPB	80	76.316	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus