EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000012556 (Gene tree)
Gene ID: 102019611
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 260-like
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 50981 bases
Position: chrJH721955.1:926328-977308
Accession: 102019611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	1	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	2	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	3	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	4	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	5	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	6	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	7	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	8	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	9	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	10	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	11	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	12	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	13	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	14	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	15	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	16	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	17	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	18	19
ENSCLAP00000018321	zf-C2H2	PF00096.26	1.6e-111	19	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	1	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	2	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	3	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	4	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	5	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	6	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	7	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	8	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	9	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	10	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	11	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	12	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	13	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	14	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	15	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	16	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	17	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	18	19
ENSCLAP00000018323	zf-C2H2	PF00096.26	2.3e-111	19	19
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	1	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	2	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	3	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	4	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	5	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	6	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	7	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	8	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	9	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	10	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	11	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	12	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	13	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	14	15
ENSCLAP00000018322	zf-C2H2	PF00096.26	5.7e-84	15	15
ENSCLAP00000018321	zf-met	PF12874.7	4.4e-11	1	1
ENSCLAP00000018322	zf-met	PF12874.7	2.1e-10	1	1
ENSCLAP00000018323	zf-met	PF12874.7	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018500	-	2532	-	ENSCLAP00000018321	843 (aa)	-	-
ENSCLAT00000018501	-	2064	XM_013505071	ENSCLAP00000018322	687 (aa)	XP_013360525	-
ENSCLAT00000018502	-	2658	-	ENSCLAP00000018323	885 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000012556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000012556	-	92	34.805	ENSCLAG00000006252	ZNF574	95	37.371
ENSCLAG00000012556	-	73	37.209	ENSCLAG00000010565	ZNF521	91	37.374
ENSCLAG00000012556	-	73	33.889	ENSCLAG00000014605	PRDM10	54	34.409
ENSCLAG00000012556	-	77	35.473	ENSCLAG00000002951	ZNF526	87	34.516
ENSCLAG00000012556	-	88	36.580	ENSCLAG00000006953	ZNF319	94	37.100
ENSCLAG00000012556	-	70	55.102	ENSCLAG00000010479	SALL4	56	55.102
ENSCLAG00000012556	-	90	46.652	ENSCLAG00000001377	-	96	44.294
ENSCLAG00000012556	-	87	47.860	ENSCLAG00000004223	ZFP1	95	45.260
ENSCLAG00000012556	-	76	44.898	ENSCLAG00000006380	SALL1	58	44.643
ENSCLAG00000012556	-	78	40.816	ENSCLAG00000017291	ZBTB47	61	40.444
ENSCLAG00000012556	-	89	36.923	ENSCLAG00000010852	ZBTB41	51	36.058
ENSCLAG00000012556	-	68	46.429	ENSCLAG00000001400	SALL2	63	48.077
ENSCLAG00000012556	-	96	48.182	ENSCLAG00000003483	ZNF112	99	47.755
ENSCLAG00000012556	-	99	46.974	ENSCLAG00000001537	ZNF81	97	49.202
ENSCLAG00000012556	-	70	59.184	ENSCLAG00000007727	SALL3	60	55.102
ENSCLAG00000012556	-	97	57.273	ENSCLAG00000000250	ZNF550	94	57.273
ENSCLAG00000012556	-	79	38.947	ENSCLAG00000016426	OVOL1	64	40.404
ENSCLAG00000012556	-	81	48.205	ENSCLAG00000011189	ZBTB24	64	41.991
ENSCLAG00000012556	-	68	40.964	ENSCLAG00000014824	-	96	40.964
ENSCLAG00000012556	-	98	51.646	ENSCLAG00000014648	-	100	51.646
ENSCLAG00000012556	-	73	45.794	ENSCLAG00000011797	SNAI2	52	45.794
ENSCLAG00000012556	-	77	39.726	ENSCLAG00000013368	ZNF652	53	39.726
ENSCLAG00000012556	-	73	43.421	ENSCLAG00000007342	ZNF423	70	43.421
ENSCLAG00000012556	-	65	53.750	ENSCLAG00000001598	ZNF784	86	50.617
ENSCLAG00000012556	-	90	55.233	ENSCLAG00000010195	-	99	52.137
ENSCLAG00000012556	-	74	42.017	ENSCLAG00000001374	WT1	50	44.954
ENSCLAG00000012556	-	73	46.053	ENSCLAG00000002230	ZEB2	50	32.979
ENSCLAG00000012556	-	84	53.957	ENSCLAG00000011533	ZNF768	52	53.521
ENSCLAG00000012556	-	72	42.593	ENSCLAG00000003912	GTF3A	86	38.889
ENSCLAG00000012556	-	84	35.949	ENSCLAG00000008329	ZFP64	66	36.957
ENSCLAG00000012556	-	99	52.439	ENSCLAG00000003116	ZNF2	97	52.439
ENSCLAG00000012556	-	82	47.887	ENSCLAG00000005392	PRDM5	87	51.408
ENSCLAG00000012556	-	74	45.872	ENSCLAG00000007793	ZNF236	80	41.667
ENSCLAG00000012556	-	88	49.905	ENSCLAG00000003065	ZNF226	84	49.905
ENSCLAG00000012556	-	93	53.642	ENSCLAG00000000758	-	86	52.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012556	-	94	92.188	ENSCAPG00000003129	-	94	92.188	Cavia_aperea
ENSCLAG00000012556	-	96	92.108	ENSCPOG00000034004	-	98	94.370	Cavia_porcellus
ENSCLAG00000012556	-	99	81.243	ENSCGRG00001000576	Zfp26	88	81.243	Cricetulus_griseus_chok1gshd
ENSCLAG00000012556	-	93	83.765	ENSCGRG00000000280	-	97	83.765	Cricetulus_griseus_crigri
ENSCLAG00000012556	-	99	81.243	ENSCGRG00000010436	-	88	81.243	Cricetulus_griseus_crigri
ENSCLAG00000012556	-	99	82.129	ENSDORG00000027564	Zfp26	92	80.861	Dipodomys_ordii
ENSCLAG00000012556	-	99	93.243	ENSFDAG00000009594	-	96	93.243	Fukomys_damarensis
ENSCLAG00000012556	-	99	90.930	ENSHGLG00000005362	-	92	90.930	Heterocephalus_glaber_female
ENSCLAG00000012556	-	99	92.225	ENSHGLG00100007268	-	99	92.225	Heterocephalus_glaber_male
ENSCLAG00000012556	-	99	82.304	ENSSTOG00000023536	-	99	82.304	Ictidomys_tridecemlineatus
ENSCLAG00000012556	-	98	81.876	ENSJJAG00000020082	-	99	80.760	Jaculus_jaculus
ENSCLAG00000012556	-	99	80.024	ENSMAUG00000017074	Zfp26	99	79.953	Mesocricetus_auratus
ENSCLAG00000012556	-	99	79.929	ENSMOCG00000015724	Zfp26	98	79.929	Microtus_ochrogaster
ENSCLAG00000012556	-	99	78.923	ENSMUSG00000063108	Zfp26	89	78.923	Mus_musculus
ENSCLAG00000012556	-	99	81.807	ENSNGAG00000020695	Zfp26	96	81.807	Nannospalax_galili
ENSCLAG00000012556	-	98	93.220	ENSODEG00000016460	-	98	93.220	Octodon_degus
ENSCLAG00000012556	-	94	65.332	ENSOCUG00000029276	-	99	66.121	Oryctolagus_cuniculus
ENSCLAG00000012556	-	99	79.484	ENSPEMG00000016507	Zfp26	89	79.484	Peromyscus_maniculatus_bairdii
ENSCLAG00000012556	-	99	80.094	ENSRNOG00000025937	Zfp26	99	81.876	Rattus_norvegicus