EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000012582 (Gene tree)
Gene ID: 102026139
Gene Symbol: SETX
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 58645 bases
Position: chrJH721973.1:1718377-1777021
Accession: 102026139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018358	UvrD-helicase	PF00580.21	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018538	SETX-201	11151	XM_005408377	ENSCLAP00000018358	2584 (aa)	XP_005408434	UPI00038EE164

Gene Model

Click here to download ENSCLAG00000012582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012582	SETX	99	73.976	ENSG00000107290	SETX	99	79.325	Homo_sapiens
ENSCLAG00000012582	SETX	76	42.634	ENSAMXG00000014406	-	83	42.561	Astyanax_mexicanus
ENSCLAG00000012582	SETX	99	74.235	ENSCJAG00000018245	SETX	97	74.235	Callithrix_jacchus
ENSCLAG00000012582	SETX	99	80.246	ENSCPOG00000001492	SETX	97	80.246	Cavia_porcellus
ENSCLAG00000012582	SETX	72	91.898	ENSETEG00000008111	-	69	91.898	Echinops_telfairi
ENSCLAG00000012582	SETX	90	77.693	ENSECAG00000012019	SETX	96	77.693	Equus_caballus
ENSCLAG00000012582	SETX	83	40.524	ENSELUG00000022536	-	86	40.769	Esox_lucius
ENSCLAG00000012582	SETX	99	73.958	ENSFCAG00000007102	SETX	97	74.216	Felis_catus
ENSCLAG00000012582	SETX	77	74.713	ENSFALG00000001464	SETX	83	74.713	Ficedula_albicollis
ENSCLAG00000012582	SETX	99	72.560	ENSGGOG00000027664	SETX	98	79.614	Gorilla_gorilla
ENSCLAG00000012582	SETX	59	50.000	ENSIPUG00000006685	setx	77	41.013	Ictalurus_punctatus
ENSCLAG00000012582	SETX	83	53.358	ENSLOCG00000004264	SETX	88	53.467	Lepisosteus_oculatus
ENSCLAG00000012582	SETX	99	67.808	ENSMOCG00000000848	Setx	99	67.885	Microtus_ochrogaster
ENSCLAG00000012582	SETX	99	70.050	MGP_PahariEiJ_G0024821	Setx	97	70.061	Mus_pahari
ENSCLAG00000012582	SETX	99	70.617	ENSNLEG00000012839	SETX	97	70.617	Nomascus_leucogenys
ENSCLAG00000012582	SETX	97	69.305	ENSOCUG00000005616	SETX	95	69.208	Oryctolagus_cuniculus
ENSCLAG00000012582	SETX	99	75.236	ENSOGAG00000013387	SETX	97	75.236	Otolemur_garnettii
ENSCLAG00000012582	SETX	99	74.024	ENSPPAG00000004108	SETX	98	78.922	Pan_paniscus
ENSCLAG00000012582	SETX	99	74.073	ENSPPRG00000012867	SETX	97	74.331	Panthera_pardus
ENSCLAG00000012582	SETX	99	73.461	ENSPTIG00000021101	SETX	97	74.111	Panthera_tigris_altaica
ENSCLAG00000012582	SETX	99	73.670	ENSPTRG00000021495	SETX	98	78.802	Pan_troglodytes
ENSCLAG00000012582	SETX	76	48.928	ENSPKIG00000025162	SETX	77	48.928	Paramormyrops_kingsleyae
ENSCLAG00000012582	SETX	58	93.103	ENSSARG00000002336	-	60	93.103	Sorex_araneus
ENSCLAG00000012582	SETX	87	75.145	ENSSPUG00000016332	SETX	81	75.145	Sphenodon_punctatus
ENSCLAG00000012582	SETX	99	72.783	ENSSSCG00000005724	SETX	99	72.717	Sus_scrofa
ENSCLAG00000012582	SETX	78	74.379	ENSTGUG00000005117	SETX	83	74.379	Taeniopygia_guttata
ENSCLAG00000012582	SETX	79	64.552	ENSXETG00000006254	setx	85	64.552	Xenopus_tropicalis