EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000012761 (Gene tree)
Gene ID: 102021179
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 564070 bases
Position: chrJH721902.1:10344365-10908434
Accession: 102021179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018606	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSCLAP00000018605	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSCLAP00000018603	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSCLAP00000018604	Fox-1_C	PF12414.8	1.7e-40	1	1
ENSCLAP00000018602	Fox-1_C	PF12414.8	1.9e-40	1	1
ENSCLAP00000018604	RRM_1	PF00076.22	2.6e-18	1	1
ENSCLAP00000018603	RRM_1	PF00076.22	2.8e-18	1	1
ENSCLAP00000018602	RRM_1	PF00076.22	2.9e-18	1	1
ENSCLAP00000018606	RRM_1	PF00076.22	2.9e-18	1	1
ENSCLAP00000018605	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018786	RBFOX1-202	3930	XM_005391225	ENSCLAP00000018603	418 (aa)	XP_005391282	UPI00038EC85A
ENSCLAT00000018787	RBFOX1-203	4306	XM_005391226	ENSCLAP00000018604	376 (aa)	XP_005391283	-
ENSCLAT00000018785	RBFOX1-201	3980	XM_005391236	ENSCLAP00000018602	394 (aa)	XP_005391293	-
ENSCLAT00000018788	RBFOX1-204	4253	XM_005391230	ENSCLAP00000018605	399 (aa)	XP_005391287	-
ENSCLAT00000018789	RBFOX1-205	1194	-	ENSCLAP00000018606	397 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000012761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000012761	RBFOX1	100	59.472	ENSCLAG00000017106	RBFOX2	100	58.993
ENSCLAG00000012761	RBFOX1	91	58.454	ENSCLAG00000006449	RBFOX3	100	62.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012761	RBFOX1	100	98.489	ENSG00000078328	RBFOX1	100	98.489	Homo_sapiens
ENSCLAG00000012761	RBFOX1	100	75.663	ENSAPOG00000003197	rbfox1	100	76.145	Acanthochromis_polyacanthus
ENSCLAG00000012761	RBFOX1	63	94.400	ENSAMEG00000008605	RBFOX1	100	94.400	Ailuropoda_melanoleuca
ENSCLAG00000012761	RBFOX1	67	64.527	ENSACIG00000005478	rbfox1	68	64.983	Amphilophus_citrinellus
ENSCLAG00000012761	RBFOX1	80	70.347	ENSAOCG00000008283	rbfox1	99	70.032	Amphiprion_ocellaris
ENSCLAG00000012761	RBFOX1	95	71.429	ENSAPEG00000010636	rbfox1	100	71.316	Amphiprion_percula
ENSCLAG00000012761	RBFOX1	80	68.966	ENSATEG00000007513	rbfox1	99	68.652	Anabas_testudineus
ENSCLAG00000012761	RBFOX1	98	93.830	ENSAPLG00000013263	RBFOX1	97	94.087	Anas_platyrhynchos
ENSCLAG00000012761	RBFOX1	99	86.216	ENSACAG00000004013	RBFOX1	100	86.216	Anolis_carolinensis
ENSCLAG00000012761	RBFOX1	100	96.000	ENSANAG00000029527	RBFOX1	98	98.718	Aotus_nancymaae
ENSCLAG00000012761	RBFOX1	59	87.444	ENSAMXG00000002431	rbfox1	65	87.111	Astyanax_mexicanus
ENSCLAG00000012761	RBFOX1	100	97.606	ENSBTAG00000007210	RBFOX1	100	97.606	Bos_taurus
ENSCLAG00000012761	RBFOX1	100	97.847	ENSCJAG00000017351	RBFOX1	100	97.847	Callithrix_jacchus
ENSCLAG00000012761	RBFOX1	100	97.608	ENSCAFG00000019082	RBFOX1	100	97.608	Canis_familiaris
ENSCLAG00000012761	RBFOX1	100	83.503	ENSCAFG00020024881	RBFOX1	99	83.503	Canis_lupus_dingo
ENSCLAG00000012761	RBFOX1	100	97.606	ENSCHIG00000023549	RBFOX1	100	97.606	Capra_hircus
ENSCLAG00000012761	RBFOX1	97	98.630	ENSTSYG00000005334	RBFOX1	100	98.458	Carlito_syrichta
ENSCLAG00000012761	RBFOX1	100	99.522	ENSCAPG00000017669	RBFOX1	100	99.522	Cavia_aperea
ENSCLAG00000012761	RBFOX1	100	99.522	ENSCPOG00000011314	RBFOX1	100	99.522	Cavia_porcellus
ENSCLAG00000012761	RBFOX1	100	97.847	ENSCCAG00000023031	RBFOX1	100	97.847	Cebus_capucinus
ENSCLAG00000012761	RBFOX1	100	97.847	ENSCATG00000033816	RBFOX1	100	97.847	Cercocebus_atys
ENSCLAG00000012761	RBFOX1	100	98.138	ENSCSAG00000008739	RBFOX1	100	98.138	Chlorocebus_sabaeus
ENSCLAG00000012761	RBFOX1	100	75.837	ENSCHOG00000012843	RBFOX1	100	75.837	Choloepus_hoffmanni
ENSCLAG00000012761	RBFOX1	100	92.819	ENSCPBG00000026626	RBFOX1	100	92.819	Chrysemys_picta_bellii
ENSCLAG00000012761	RBFOX1	100	97.847	ENSCANG00000033125	RBFOX1	100	97.847	Colobus_angolensis_palliatus
ENSCLAG00000012761	RBFOX1	100	97.229	ENSCGRG00001013729	Rbfox1	100	97.229	Cricetulus_griseus_chok1gshd
ENSCLAG00000012761	RBFOX1	100	97.229	ENSCGRG00000003272	Rbfox1	100	97.229	Cricetulus_griseus_crigri
ENSCLAG00000012761	RBFOX1	95	71.285	ENSCSEG00000008840	rbfox1	100	71.285	Cynoglossus_semilaevis
ENSCLAG00000012761	RBFOX1	100	80.500	ENSDARG00000014746	rbfox1	100	86.341	Danio_rerio
ENSCLAG00000012761	RBFOX1	98	97.949	ENSDNOG00000043612	RBFOX1	95	97.462	Dasypus_novemcinctus
ENSCLAG00000012761	RBFOX1	98	95.663	ENSDORG00000010024	Rbfox1	99	93.781	Dipodomys_ordii
ENSCLAG00000012761	RBFOX1	100	78.230	ENSETEG00000003771	RBFOX1	100	78.230	Echinops_telfairi
ENSCLAG00000012761	RBFOX1	98	98.715	ENSEASG00005011599	RBFOX1	98	98.974	Equus_asinus_asinus
ENSCLAG00000012761	RBFOX1	100	98.404	ENSECAG00000012667	RBFOX1	100	98.404	Equus_caballus
ENSCLAG00000012761	RBFOX1	98	50.765	ENSELUG00000013096	rbfox1	99	50.378	Esox_lucius
ENSCLAG00000012761	RBFOX1	100	97.606	ENSFCAG00000025322	RBFOX1	100	97.606	Felis_catus
ENSCLAG00000012761	RBFOX1	86	94.136	ENSFALG00000004027	RBFOX1	99	92.145	Ficedula_albicollis
ENSCLAG00000012761	RBFOX1	100	99.522	ENSFDAG00000007388	RBFOX1	100	99.522	Fukomys_damarensis
ENSCLAG00000012761	RBFOX1	100	92.105	ENSGALG00000034325	RBFOX1	100	93.140	Gallus_gallus
ENSCLAG00000012761	RBFOX1	100	91.388	ENSGAGG00000023681	RBFOX1	100	94.164	Gopherus_agassizii
ENSCLAG00000012761	RBFOX1	100	97.847	ENSGGOG00000016871	-	100	97.847	Gorilla_gorilla
ENSCLAG00000012761	RBFOX1	100	99.282	ENSHGLG00000016944	RBFOX1	100	99.282	Heterocephalus_glaber_female
ENSCLAG00000012761	RBFOX1	100	99.282	ENSHGLG00100003272	RBFOX1	100	99.282	Heterocephalus_glaber_male
ENSCLAG00000012761	RBFOX1	85	70.605	ENSHCOG00000016419	rbfox1	91	70.690	Hippocampus_comes
ENSCLAG00000012761	RBFOX1	100	80.585	ENSIPUG00000015215	rbfox1	100	83.289	Ictalurus_punctatus
ENSCLAG00000012761	RBFOX1	100	97.481	ENSSTOG00000000322	RBFOX1	100	97.481	Ictidomys_tridecemlineatus
ENSCLAG00000012761	RBFOX1	100	94.258	ENSJJAG00000002575	Rbfox1	100	94.258	Jaculus_jaculus
ENSCLAG00000012761	RBFOX1	99	73.134	ENSLBEG00000014659	rbfox1	99	72.886	Labrus_bergylta
ENSCLAG00000012761	RBFOX1	98	86.260	ENSLOCG00000006675	rbfox1	99	86.260	Lepisosteus_oculatus
ENSCLAG00000012761	RBFOX1	77	98.701	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSCLAG00000012761	RBFOX1	100	97.608	ENSMFAG00000036447	RBFOX1	100	97.608	Macaca_fascicularis
ENSCLAG00000012761	RBFOX1	100	97.608	ENSMMUG00000003458	RBFOX1	99	98.634	Macaca_mulatta
ENSCLAG00000012761	RBFOX1	100	97.872	ENSMNEG00000032034	RBFOX1	100	97.608	Macaca_nemestrina
ENSCLAG00000012761	RBFOX1	100	97.847	ENSMLEG00000015382	RBFOX1	100	97.847	Mandrillus_leucophaeus
ENSCLAG00000012761	RBFOX1	95	74.745	ENSMAMG00000003142	rbfox1	100	75.255	Mastacembelus_armatus
ENSCLAG00000012761	RBFOX1	77	86.942	ENSMGAG00000008606	RBFOX1	98	86.713	Meleagris_gallopavo
ENSCLAG00000012761	RBFOX1	99	56.566	ENSMAUG00000020570	Rbfox1	99	55.556	Mesocricetus_auratus
ENSCLAG00000012761	RBFOX1	100	95.756	ENSMICG00000034286	RBFOX1	100	95.756	Microcebus_murinus
ENSCLAG00000012761	RBFOX1	100	97.229	ENSMOCG00000020932	Rbfox1	100	97.396	Microtus_ochrogaster
ENSCLAG00000012761	RBFOX1	86	71.014	ENSMMOG00000009716	rbfox1	86	71.386	Mola_mola
ENSCLAG00000012761	RBFOX1	94	96.610	ENSMODG00000005826	RBFOX1	100	96.610	Monodelphis_domestica
ENSCLAG00000012761	RBFOX1	100	75.550	ENSMALG00000003337	rbfox1	100	75.550	Monopterus_albus
ENSCLAG00000012761	RBFOX1	100	97.481	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.481	Mus_caroli
ENSCLAG00000012761	RBFOX1	100	97.229	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSCLAG00000012761	RBFOX1	100	97.481	MGP_PahariEiJ_G0016135	Rbfox1	100	97.481	Mus_pahari
ENSCLAG00000012761	RBFOX1	100	96.977	MGP_SPRETEiJ_G0021321	Rbfox1	100	96.977	Mus_spretus
ENSCLAG00000012761	RBFOX1	100	97.208	ENSMPUG00000014822	RBFOX1	100	97.208	Mustela_putorius_furo
ENSCLAG00000012761	RBFOX1	77	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSCLAG00000012761	RBFOX1	100	97.368	ENSNGAG00000023276	Rbfox1	100	97.938	Nannospalax_galili
ENSCLAG00000012761	RBFOX1	98	60.482	ENSNBRG00000011084	rbfox1	94	61.017	Neolamprologus_brichardi
ENSCLAG00000012761	RBFOX1	100	97.608	ENSNLEG00000010017	-	100	97.608	Nomascus_leucogenys
ENSCLAG00000012761	RBFOX1	100	79.665	ENSMEUG00000012525	RBFOX1	100	79.665	Notamacropus_eugenii
ENSCLAG00000012761	RBFOX1	100	79.187	ENSOPRG00000006199	-	100	77.990	Ochotona_princeps
ENSCLAG00000012761	RBFOX1	100	99.043	ENSODEG00000013166	RBFOX1	100	99.043	Octodon_degus
ENSCLAG00000012761	RBFOX1	100	95.213	ENSOANG00000002379	RBFOX1	100	95.213	Ornithorhynchus_anatinus
ENSCLAG00000012761	RBFOX1	59	95.067	ENSOCUG00000001205	-	99	95.067	Oryctolagus_cuniculus
ENSCLAG00000012761	RBFOX1	99	97.964	ENSOGAG00000025535	RBFOX1	99	97.964	Otolemur_garnettii
ENSCLAG00000012761	RBFOX1	65	86.066	ENSOARG00000005135	RBFOX1	100	84.462	Ovis_aries
ENSCLAG00000012761	RBFOX1	98	98.711	ENSPPAG00000036238	-	100	98.711	Pan_paniscus
ENSCLAG00000012761	RBFOX1	100	97.368	ENSPPRG00000006546	RBFOX1	100	97.368	Panthera_pardus
ENSCLAG00000012761	RBFOX1	98	87.113	ENSPTIG00000021154	RBFOX1	100	85.969	Panthera_tigris_altaica
ENSCLAG00000012761	RBFOX1	100	97.847	ENSPTRG00000007744	RBFOX1	100	97.847	Pan_troglodytes
ENSCLAG00000012761	RBFOX1	100	97.847	ENSPANG00000026500	RBFOX1	100	97.847	Papio_anubis
ENSCLAG00000012761	RBFOX1	80	82.392	ENSPKIG00000019353	rbfox1	88	82.392	Paramormyrops_kingsleyae
ENSCLAG00000012761	RBFOX1	100	80.952	ENSPKIG00000009667	-	99	81.572	Paramormyrops_kingsleyae
ENSCLAG00000012761	RBFOX1	100	93.233	ENSPSIG00000006523	RBFOX1	100	93.233	Pelodiscus_sinensis
ENSCLAG00000012761	RBFOX1	100	97.481	ENSPEMG00000017607	Rbfox1	100	97.481	Peromyscus_maniculatus_bairdii
ENSCLAG00000012761	RBFOX1	73	92.414	ENSPCIG00000026887	RBFOX1	100	92.414	Phascolarctos_cinereus
ENSCLAG00000012761	RBFOX1	100	97.970	ENSPPYG00000007079	-	100	97.970	Pongo_abelii
ENSCLAG00000012761	RBFOX1	90	88.360	ENSPCAG00000002630	RBFOX1	100	88.360	Procavia_capensis
ENSCLAG00000012761	RBFOX1	100	97.847	ENSPCOG00000025687	RBFOX1	100	97.847	Propithecus_coquereli
ENSCLAG00000012761	RBFOX1	100	93.780	ENSPVAG00000013467	RBFOX1	100	93.780	Pteropus_vampyrus
ENSCLAG00000012761	RBFOX1	95	80.605	ENSPNAG00000023109	rbfox1	100	80.605	Pygocentrus_nattereri
ENSCLAG00000012761	RBFOX1	100	94.976	ENSRNOG00000002827	Rbfox1	100	94.976	Rattus_norvegicus
ENSCLAG00000012761	RBFOX1	100	98.138	ENSRBIG00000044478	RBFOX1	100	98.711	Rhinopithecus_bieti
ENSCLAG00000012761	RBFOX1	100	97.847	ENSRROG00000044411	RBFOX1	100	97.847	Rhinopithecus_roxellana
ENSCLAG00000012761	RBFOX1	100	97.995	ENSSBOG00000033726	RBFOX1	100	97.995	Saimiri_boliviensis_boliviensis
ENSCLAG00000012761	RBFOX1	100	91.436	ENSSHAG00000009257	RBFOX1	100	91.436	Sarcophilus_harrisii
ENSCLAG00000012761	RBFOX1	100	67.990	ENSSFOG00015023675	rbfox1	93	87.778	Scleropages_formosus
ENSCLAG00000012761	RBFOX1	88	70.112	ENSSFOG00015009955	-	87	68.182	Scleropages_formosus
ENSCLAG00000012761	RBFOX1	98	76.847	ENSSMAG00000015505	rbfox1	96	73.223	Scophthalmus_maximus
ENSCLAG00000012761	RBFOX1	98	74.490	ENSSDUG00000016413	rbfox1	99	74.300	Seriola_dumerili
ENSCLAG00000012761	RBFOX1	85	72.353	ENSSLDG00000009353	rbfox1	97	71.726	Seriola_lalandi_dorsalis
ENSCLAG00000012761	RBFOX1	85	81.765	ENSSPUG00000009732	RBFOX1	87	81.818	Sphenodon_punctatus
ENSCLAG00000012761	RBFOX1	98	76.108	ENSSPAG00000009723	rbfox1	100	75.862	Stegastes_partitus
ENSCLAG00000012761	RBFOX1	100	95.443	ENSSSCG00000007917	RBFOX1	100	98.305	Sus_scrofa
ENSCLAG00000012761	RBFOX1	98	94.087	ENSTGUG00000004562	RBFOX1	100	94.344	Taeniopygia_guttata
ENSCLAG00000012761	RBFOX1	98	75.550	ENSTRUG00000020940	rbfox1	100	75.550	Takifugu_rubripes
ENSCLAG00000012761	RBFOX1	67	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSCLAG00000012761	RBFOX1	81	82.759	ENSTBEG00000009169	-	81	82.759	Tupaia_belangeri
ENSCLAG00000012761	RBFOX1	100	97.368	ENSTTRG00000005700	RBFOX1	100	97.368	Tursiops_truncatus
ENSCLAG00000012761	RBFOX1	100	93.147	ENSUAMG00000024633	RBFOX1	99	93.147	Ursus_americanus
ENSCLAG00000012761	RBFOX1	100	84.518	ENSUMAG00000003579	RBFOX1	99	84.518	Ursus_maritimus
ENSCLAG00000012761	RBFOX1	81	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSCLAG00000012761	RBFOX1	100	97.606	ENSVVUG00000017311	RBFOX1	100	97.606	Vulpes_vulpes