EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000012811 (Gene tree)
Gene ID: 102007515
Gene Symbol: GTSF1
Alias: FAM112B|FLJ32942
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 17392 bases
Position: chrJH721918.1:1701072-1718463
Accession: 102007515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018682	zf-U11-48K	PF05253.12	4e-20	1	2
ENSCLAP00000018682	zf-U11-48K	PF05253.12	4e-20	2	2
ENSCLAP00000018683	zf-U11-48K	PF05253.12	5.5e-20	1	2
ENSCLAP00000018683	zf-U11-48K	PF05253.12	5.5e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018866	GTSF1-202	564	-	ENSCLAP00000018683	187 (aa)	-	-
ENSCLAT00000018865	GTSF1-201	918	XM_005397225	ENSCLAP00000018682	167 (aa)	XP_005397282	UPI00038EE2E8

Gene Model

Click here to download ENSCLAG00000012811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000012811	GTSF1	69	33.333	ENSCLAG00000008579	-	80	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012811	GTSF1	100	90.419	ENSG00000170627	GTSF1	100	90.419	Homo_sapiens
ENSCLAG00000012811	GTSF1	88	46.309	ENSAPOG00000022724	-	95	46.309	Acanthochromis_polyacanthus
ENSCLAG00000012811	GTSF1	97	96.296	ENSAMEG00000000939	GTSF1	96	96.296	Ailuropoda_melanoleuca
ENSCLAG00000012811	GTSF1	88	44.966	ENSAOCG00000022214	-	72	43.312	Amphiprion_ocellaris
ENSCLAG00000012811	GTSF1	77	58.140	ENSAPLG00000004814	GTSF1	95	58.140	Anas_platyrhynchos
ENSCLAG00000012811	GTSF1	97	62.346	ENSACAG00000014260	-	95	61.585	Anolis_carolinensis
ENSCLAG00000012811	GTSF1	69	48.276	ENSACAG00000029590	-	95	48.276	Anolis_carolinensis
ENSCLAG00000012811	GTSF1	100	89.820	ENSANAG00000024529	GTSF1	100	89.820	Aotus_nancymaae
ENSCLAG00000012811	GTSF1	100	94.012	ENSBTAG00000018085	GTSF1	100	94.012	Bos_taurus
ENSCLAG00000012811	GTSF1	100	85.629	ENSCJAG00000039915	-	99	80.645	Callithrix_jacchus
ENSCLAG00000012811	GTSF1	100	90.419	ENSCJAG00000018968	-	100	90.419	Callithrix_jacchus
ENSCLAG00000012811	GTSF1	100	95.808	ENSCAFG00000006465	-	100	95.808	Canis_familiaris
ENSCLAG00000012811	GTSF1	100	95.808	ENSCAFG00020020373	-	94	95.122	Canis_lupus_dingo
ENSCLAG00000012811	GTSF1	98	93.252	ENSCHIG00000012215	-	95	93.252	Capra_hircus
ENSCLAG00000012811	GTSF1	100	73.653	ENSTSYG00000035266	-	100	73.653	Carlito_syrichta
ENSCLAG00000012811	GTSF1	99	92.169	ENSTSYG00000004679	-	100	92.169	Carlito_syrichta
ENSCLAG00000012811	GTSF1	100	98.204	ENSCPOG00000008743	GTSF1	100	98.204	Cavia_porcellus
ENSCLAG00000012811	GTSF1	96	67.702	ENSCCAG00000032808	GTSF1	100	67.702	Cebus_capucinus
ENSCLAG00000012811	GTSF1	100	90.419	ENSCATG00000036328	GTSF1	100	90.419	Cercocebus_atys
ENSCLAG00000012811	GTSF1	94	90.446	ENSCSAG00000005394	GTSF1	99	90.446	Chlorocebus_sabaeus
ENSCLAG00000012811	GTSF1	100	94.012	ENSCHOG00000001659	GTSF1	100	94.012	Choloepus_hoffmanni
ENSCLAG00000012811	GTSF1	99	69.880	ENSCPBG00000005134	-	81	64.706	Chrysemys_picta_bellii
ENSCLAG00000012811	GTSF1	95	60.000	ENSCPBG00000024905	-	86	61.250	Chrysemys_picta_bellii
ENSCLAG00000012811	GTSF1	100	89.222	ENSCANG00000033118	GTSF1	100	89.222	Colobus_angolensis_palliatus
ENSCLAG00000012811	GTSF1	100	85.030	ENSCANG00000031776	-	100	85.030	Colobus_angolensis_palliatus
ENSCLAG00000012811	GTSF1	100	97.006	ENSCGRG00001013814	Gtsf1	100	97.006	Cricetulus_griseus_chok1gshd
ENSCLAG00000012811	GTSF1	100	97.006	ENSCGRG00000007733	Gtsf1	100	97.006	Cricetulus_griseus_crigri
ENSCLAG00000012811	GTSF1	94	93.631	ENSDNOG00000001438	-	90	93.631	Dasypus_novemcinctus
ENSCLAG00000012811	GTSF1	100	97.006	ENSDORG00000003228	Gtsf1	100	97.006	Dipodomys_ordii
ENSCLAG00000012811	GTSF1	100	92.814	ENSETEG00000009310	GTSF1	100	92.814	Echinops_telfairi
ENSCLAG00000012811	GTSF1	100	95.210	ENSEASG00005010260	GTSF1	95	91.525	Equus_asinus_asinus
ENSCLAG00000012811	GTSF1	100	95.210	ENSECAG00000013618	GTSF1	100	95.210	Equus_caballus
ENSCLAG00000012811	GTSF1	100	96.407	ENSEEUG00000005185	GTSF1	100	96.407	Erinaceus_europaeus
ENSCLAG00000012811	GTSF1	100	67.066	ENSFCAG00000023672	-	95	64.972	Felis_catus
ENSCLAG00000012811	GTSF1	100	95.808	ENSFCAG00000010156	-	100	95.808	Felis_catus
ENSCLAG00000012811	GTSF1	75	53.175	ENSFALG00000007613	-	100	53.175	Ficedula_albicollis
ENSCLAG00000012811	GTSF1	100	92.814	ENSFDAG00000009383	GTSF1	100	92.814	Fukomys_damarensis
ENSCLAG00000012811	GTSF1	92	54.545	ENSGALG00000001109	GTSF1	95	54.545	Gallus_gallus
ENSCLAG00000012811	GTSF1	88	49.660	ENSGACG00000010783	-	80	49.660	Gasterosteus_aculeatus
ENSCLAG00000012811	GTSF1	99	61.677	ENSGAGG00000011062	GTSF1	86	61.677	Gopherus_agassizii
ENSCLAG00000012811	GTSF1	62	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
ENSCLAG00000012811	GTSF1	66	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSCLAG00000012811	GTSF1	100	90.419	ENSGGOG00000016063	GTSF1	100	90.419	Gorilla_gorilla
ENSCLAG00000012811	GTSF1	100	94.611	ENSHGLG00000002436	GTSF1	100	94.611	Heterocephalus_glaber_female
ENSCLAG00000012811	GTSF1	100	94.611	ENSHGLG00100017301	GTSF1	100	94.611	Heterocephalus_glaber_male
ENSCLAG00000012811	GTSF1	93	47.771	ENSIPUG00000002483	-	82	48.052	Ictalurus_punctatus
ENSCLAG00000012811	GTSF1	100	97.605	ENSSTOG00000025170	GTSF1	100	97.605	Ictidomys_tridecemlineatus
ENSCLAG00000012811	GTSF1	100	92.216	ENSJJAG00000003323	-	100	92.216	Jaculus_jaculus
ENSCLAG00000012811	GTSF1	100	86.228	ENSJJAG00000017442	-	100	86.228	Jaculus_jaculus
ENSCLAG00000012811	GTSF1	88	48.980	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
ENSCLAG00000012811	GTSF1	95	60.759	ENSLACG00000008870	GTSF1	95	54.645	Latimeria_chalumnae
ENSCLAG00000012811	GTSF1	97	96.296	ENSLAFG00000016318	GTSF1	97	96.296	Loxodonta_africana
ENSCLAG00000012811	GTSF1	100	90.419	ENSMFAG00000041178	GTSF1	100	90.419	Macaca_fascicularis
ENSCLAG00000012811	GTSF1	100	90.419	ENSMMUG00000003758	GTSF1	100	90.419	Macaca_mulatta
ENSCLAG00000012811	GTSF1	100	90.419	ENSMNEG00000036779	GTSF1	100	90.419	Macaca_nemestrina
ENSCLAG00000012811	GTSF1	100	89.820	ENSMLEG00000028375	GTSF1	100	89.820	Mandrillus_leucophaeus
ENSCLAG00000012811	GTSF1	75	56.693	ENSMGAG00000000685	GTSF1	92	56.154	Meleagris_gallopavo
ENSCLAG00000012811	GTSF1	100	72.455	ENSMAUG00000018746	Gtsf1	99	72.455	Mesocricetus_auratus
ENSCLAG00000012811	GTSF1	100	95.808	ENSMICG00000008444	-	100	95.808	Microcebus_murinus
ENSCLAG00000012811	GTSF1	100	96.407	ENSMOCG00000018889	Gtsf1	100	96.407	Microtus_ochrogaster
ENSCLAG00000012811	GTSF1	100	86.826	ENSMODG00000019422	GTSF1	100	86.826	Monodelphis_domestica
ENSCLAG00000012811	GTSF1	100	97.605	MGP_CAROLIEiJ_G0020379	Gtsf1	100	98.425	Mus_caroli
ENSCLAG00000012811	GTSF1	100	97.605	ENSMUSG00000022487	Gtsf1	100	98.425	Mus_musculus
ENSCLAG00000012811	GTSF1	100	97.605	MGP_PahariEiJ_G0020378	Gtsf1	100	98.425	Mus_pahari
ENSCLAG00000012811	GTSF1	100	97.605	MGP_SPRETEiJ_G0021272	Gtsf1	100	98.425	Mus_spretus
ENSCLAG00000012811	GTSF1	98	96.341	ENSMPUG00000005669	-	98	96.341	Mustela_putorius_furo
ENSCLAG00000012811	GTSF1	100	94.611	ENSMPUG00000019323	-	100	94.611	Mustela_putorius_furo
ENSCLAG00000012811	GTSF1	100	86.826	ENSMPUG00000019140	-	100	86.826	Mustela_putorius_furo
ENSCLAG00000012811	GTSF1	100	91.617	ENSMLUG00000026557	-	100	91.617	Myotis_lucifugus
ENSCLAG00000012811	GTSF1	100	94.611	ENSMLUG00000012961	-	100	94.611	Myotis_lucifugus
ENSCLAG00000012811	GTSF1	100	96.407	ENSNGAG00000014213	Gtsf1	100	96.407	Nannospalax_galili
ENSCLAG00000012811	GTSF1	100	89.820	ENSNLEG00000017635	GTSF1	100	89.820	Nomascus_leucogenys
ENSCLAG00000012811	GTSF1	100	76.647	ENSMEUG00000016206	GTSF1	100	76.647	Notamacropus_eugenii
ENSCLAG00000012811	GTSF1	100	68.862	ENSOPRG00000017277	GTSF1	100	68.862	Ochotona_princeps
ENSCLAG00000012811	GTSF1	100	97.605	ENSODEG00000014220	GTSF1	100	97.605	Octodon_degus
ENSCLAG00000012811	GTSF1	99	69.880	ENSOANG00000011386	GTSF1	99	69.880	Ornithorhynchus_anatinus
ENSCLAG00000012811	GTSF1	100	95.210	ENSOCUG00000024495	GTSF1	100	95.210	Oryctolagus_cuniculus
ENSCLAG00000012811	GTSF1	76	44.961	ENSORLG00015005017	-	70	51.327	Oryzias_latipes_hsok
ENSCLAG00000012811	GTSF1	95	93.711	ENSOGAG00000017227	GTSF1	94	93.711	Otolemur_garnettii
ENSCLAG00000012811	GTSF1	100	94.611	ENSOARG00000016162	GTSF1	100	94.611	Ovis_aries
ENSCLAG00000012811	GTSF1	100	90.419	ENSPPAG00000028506	GTSF1	100	90.419	Pan_paniscus
ENSCLAG00000012811	GTSF1	100	96.407	ENSPPRG00000004344	-	100	96.407	Panthera_pardus
ENSCLAG00000012811	GTSF1	100	85.629	ENSPPRG00000017612	-	96	82.486	Panthera_pardus
ENSCLAG00000012811	GTSF1	100	96.407	ENSPTIG00000020415	-	100	96.407	Panthera_tigris_altaica
ENSCLAG00000012811	GTSF1	100	86.228	ENSPTIG00000010868	-	96	83.051	Panthera_tigris_altaica
ENSCLAG00000012811	GTSF1	100	90.419	ENSPTRG00000005041	GTSF1	100	90.419	Pan_troglodytes
ENSCLAG00000012811	GTSF1	100	90.419	ENSPANG00000020579	GTSF1	100	90.419	Papio_anubis
ENSCLAG00000012811	GTSF1	83	44.966	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
ENSCLAG00000012811	GTSF1	98	68.485	ENSPSIG00000009968	GTSF1	91	64.516	Pelodiscus_sinensis
ENSCLAG00000012811	GTSF1	100	97.006	ENSPEMG00000009595	Gtsf1	100	97.006	Peromyscus_maniculatus_bairdii
ENSCLAG00000012811	GTSF1	100	81.437	ENSPCIG00000006731	GTSF1	100	81.437	Phascolarctos_cinereus
ENSCLAG00000012811	GTSF1	100	90.419	ENSPPYG00000004605	GTSF1	100	90.419	Pongo_abelii
ENSCLAG00000012811	GTSF1	100	95.210	ENSPCOG00000016907	-	100	95.210	Propithecus_coquereli
ENSCLAG00000012811	GTSF1	97	83.333	ENSPCOG00000015201	-	99	80.247	Propithecus_coquereli
ENSCLAG00000012811	GTSF1	100	95.808	ENSPVAG00000000333	GTSF1	100	95.808	Pteropus_vampyrus
ENSCLAG00000012811	GTSF1	90	49.020	ENSPNAG00000005737	-	82	49.020	Pygocentrus_nattereri
ENSCLAG00000012811	GTSF1	100	97.605	ENSRNOG00000036831	Gtsf1	98	91.892	Rattus_norvegicus
ENSCLAG00000012811	GTSF1	100	89.820	ENSRBIG00000043438	-	100	89.820	Rhinopithecus_bieti
ENSCLAG00000012811	GTSF1	100	82.036	ENSRBIG00000039916	-	99	76.757	Rhinopithecus_bieti
ENSCLAG00000012811	GTSF1	100	90.419	ENSRROG00000008137	GTSF1	100	90.419	Rhinopithecus_roxellana
ENSCLAG00000012811	GTSF1	100	91.018	ENSSBOG00000029460	GTSF1	100	91.018	Saimiri_boliviensis_boliviensis
ENSCLAG00000012811	GTSF1	100	86.826	ENSSHAG00000011633	GTSF1	100	86.826	Sarcophilus_harrisii
ENSCLAG00000012811	GTSF1	78	95.385	ENSSARG00000004928	GTSF1	78	95.385	Sorex_araneus
ENSCLAG00000012811	GTSF1	98	48.235	ENSSPUG00000010064	GTSF1	93	70.909	Sphenodon_punctatus
ENSCLAG00000012811	GTSF1	100	95.210	ENSSSCG00000026333	GTSF1	100	95.210	Sus_scrofa
ENSCLAG00000012811	GTSF1	75	55.556	ENSTGUG00000002008	-	98	55.556	Taeniopygia_guttata
ENSCLAG00000012811	GTSF1	96	94.410	ENSTBEG00000006154	GTSF1	100	94.410	Tupaia_belangeri
ENSCLAG00000012811	GTSF1	100	93.413	ENSTTRG00000004470	GTSF1	100	93.413	Tursiops_truncatus
ENSCLAG00000012811	GTSF1	100	96.407	ENSUAMG00000021669	GTSF1	94	95.732	Ursus_americanus
ENSCLAG00000012811	GTSF1	100	96.407	ENSUMAG00000011279	GTSF1	100	96.407	Ursus_maritimus
ENSCLAG00000012811	GTSF1	100	94.012	ENSVPAG00000007016	GTSF1	100	94.012	Vicugna_pacos
ENSCLAG00000012811	GTSF1	100	95.808	ENSVVUG00000023687	-	89	93.220	Vulpes_vulpes
ENSCLAG00000012811	GTSF1	96	65.217	ENSXETG00000033546	gtsf1	71	65.217	Xenopus_tropicalis