EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000012830 (Gene tree)
Gene ID: 102016445
Gene Symbol: PLEC
Alias: EBS1|PCN|PLEC1|PLTN
Full Name: plectin
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 60074 bases
Position: chrJH721914.1:2583138-2643211
Accession: 102016445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018706	S10_plectin	PF03501.15	1.5e-35	1	1
ENSCLAP00000018705	S10_plectin	PF03501.15	1.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018892	PLEC-205	14875	XM_005395826	ENSCLAP00000018708	4549 (aa)	XP_005395883	UPI00038ED4C7
ENSCLAT00000018893	PLEC-206	14737	XM_005395827	ENSCLAP00000018709	4549 (aa)	XP_005395884	-
ENSCLAT00000018890	PLEC-203	15309	XM_005395824	ENSCLAP00000018706	4686 (aa)	XP_005395881	UPI00038EB18D
ENSCLAT00000018891	PLEC-204	14731	XM_005395832	ENSCLAP00000018707	4512 (aa)	XP_005395889	UPI00038EC2A8
ENSCLAT00000018896	PLEC-209	13569	-	ENSCLAP00000018712	4522 (aa)	-	UPI00038E9902
ENSCLAT00000018894	PLEC-207	14858	XM_005395829	ENSCLAP00000018710	4544 (aa)	XP_005395886	UPI00038EB7B6
ENSCLAT00000018895	PLEC-208	13767	XM_005395825	ENSCLAP00000018711	4588 (aa)	XP_005395882	-
ENSCLAT00000018889	PLEC-202	15324	XM_005395823	ENSCLAP00000018705	4691 (aa)	XP_005395880	UPI00038EBB6D
ENSCLAT00000018888	PLEC-201	14742	XM_005395830	ENSCLAP00000018704	4535 (aa)	XP_005395887	-

Gene Model

Click here to download ENSCLAG00000012830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012830	PLEC	100	93.730	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
ENSCLAG00000012830	PLEC	100	93.259	ENSANAG00000032431	PLEC	100	93.238	Aotus_nancymaae
ENSCLAG00000012830	PLEC	100	92.467	ENSBTAG00000011922	PLEC	100	92.467	Bos_taurus
ENSCLAG00000012830	PLEC	100	93.558	ENSCJAG00000021472	PLEC	100	93.537	Callithrix_jacchus
ENSCLAG00000012830	PLEC	100	92.603	ENSCAFG00000001433	PLEC	100	92.603	Canis_familiaris
ENSCLAG00000012830	PLEC	88	92.471	ENSCHIG00000022260	PLEC	99	92.471	Capra_hircus
ENSCLAG00000012830	PLEC	100	94.370	ENSTSYG00000033419	PLEC	100	94.370	Carlito_syrichta
ENSCLAG00000012830	PLEC	100	97.293	ENSCPOG00000007957	PLEC	100	97.293	Cavia_porcellus
ENSCLAG00000012830	PLEC	100	93.686	ENSCCAG00000031237	PLEC	100	93.665	Cebus_capucinus
ENSCLAG00000012830	PLEC	100	94.071	ENSCATG00000009349	PLEC	100	94.071	Cercocebus_atys
ENSCLAG00000012830	PLEC	100	75.283	ENSCPBG00000021974	PLEC	99	75.231	Chrysemys_picta_bellii
ENSCLAG00000012830	PLEC	100	94.991	ENSCGRG00001019864	Plec	100	94.991	Cricetulus_griseus_chok1gshd
ENSCLAG00000012830	PLEC	100	94.263	ENSCGRG00000002714	Plec	100	94.263	Cricetulus_griseus_crigri
ENSCLAG00000012830	PLEC	96	90.894	ENSDNOG00000031742	PLEC	99	90.894	Dasypus_novemcinctus
ENSCLAG00000012830	PLEC	79	93.694	ENSETEG00000015535	-	62	93.694	Echinops_telfairi
ENSCLAG00000012830	PLEC	85	96.483	ENSEEUG00000004554	-	67	96.789	Erinaceus_europaeus
ENSCLAG00000012830	PLEC	100	92.638	ENSFCAG00000042897	PLEC	100	92.638	Felis_catus
ENSCLAG00000012830	PLEC	100	96.994	ENSFDAG00000011856	PLEC	100	96.994	Fukomys_damarensis
ENSCLAG00000012830	PLEC	100	91.938	ENSGGOG00000012217	PLEC	100	91.938	Gorilla_gorilla
ENSCLAG00000012830	PLEC	100	97.140	ENSHGLG00000012646	PLEC	100	97.140	Heterocephalus_glaber_female
ENSCLAG00000012830	PLEC	100	84.296	ENSHGLG00100011759	PLEC	100	84.995	Heterocephalus_glaber_male
ENSCLAG00000012830	PLEC	100	93.871	ENSSTOG00000023061	PLEC	100	93.871	Ictidomys_tridecemlineatus
ENSCLAG00000012830	PLEC	100	94.604	ENSJJAG00000012390	Plec	100	94.626	Jaculus_jaculus
ENSCLAG00000012830	PLEC	100	94.050	ENSMFAG00000032066	PLEC	100	94.050	Macaca_fascicularis
ENSCLAG00000012830	PLEC	100	90.400	ENSMMUG00000000388	PLEC	100	90.517	Macaca_mulatta
ENSCLAG00000012830	PLEC	100	94.078	ENSMNEG00000011406	PLEC	100	94.071	Macaca_nemestrina
ENSCLAG00000012830	PLEC	100	90.532	ENSMLEG00000033296	PLEC	100	93.747	Mandrillus_leucophaeus
ENSCLAG00000012830	PLEC	100	94.736	ENSMAUG00000001116	Plec	100	94.736	Mesocricetus_auratus
ENSCLAG00000012830	PLEC	100	94.138	ENSMICG00000016160	PLEC	100	94.138	Microcebus_murinus
ENSCLAG00000012830	PLEC	100	94.736	ENSMOCG00000000674	Plec	100	94.736	Microtus_ochrogaster
ENSCLAG00000012830	PLEC	100	94.650	MGP_CAROLIEiJ_G0019913	Plec	100	95.643	Mus_caroli
ENSCLAG00000012830	PLEC	100	94.693	ENSMUSG00000022565	Plec	100	95.851	Mus_musculus
ENSCLAG00000012830	PLEC	100	94.587	MGP_PahariEiJ_G0019923	Plec	100	95.954	Mus_pahari
ENSCLAG00000012830	PLEC	100	94.714	MGP_SPRETEiJ_G0020816	Plec	100	95.747	Mus_spretus
ENSCLAG00000012830	PLEC	100	90.781	ENSMPUG00000007329	PLEC	100	90.866	Mustela_putorius_furo
ENSCLAG00000012830	PLEC	100	95.205	ENSNGAG00000008931	Plec	100	95.205	Nannospalax_galili
ENSCLAG00000012830	PLEC	96	93.179	ENSMEUG00000004499	-	70	93.179	Notamacropus_eugenii
ENSCLAG00000012830	PLEC	91	92.237	ENSOPRG00000015206	PLEC	67	92.237	Ochotona_princeps
ENSCLAG00000012830	PLEC	93	79.418	ENSOARG00000015846	-	99	80.975	Ovis_aries
ENSCLAG00000012830	PLEC	100	85.050	ENSPPAG00000042112	PLEC	100	86.078	Pan_paniscus
ENSCLAG00000012830	PLEC	100	93.858	ENSPTRG00000020672	PLEC	100	93.858	Pan_troglodytes
ENSCLAG00000012830	PLEC	100	93.858	ENSPANG00000023403	-	100	93.858	Papio_anubis
ENSCLAG00000012830	PLEC	100	94.954	ENSPEMG00000011922	Plec	100	94.976	Peromyscus_maniculatus_bairdii
ENSCLAG00000012830	PLEC	99	83.736	ENSPCIG00000014981	PLEC	99	83.736	Phascolarctos_cinereus
ENSCLAG00000012830	PLEC	100	94.007	ENSPCOG00000023279	PLEC	100	94.007	Propithecus_coquereli
ENSCLAG00000012830	PLEC	100	92.328	ENSPVAG00000009376	PLEC	91	92.416	Pteropus_vampyrus
ENSCLAG00000012830	PLEC	100	94.561	ENSRNOG00000023781	Plec	100	94.561	Rattus_norvegicus
ENSCLAG00000012830	PLEC	100	85.395	ENSRBIG00000041068	PLEC	61	84.506	Rhinopithecus_bieti
ENSCLAG00000012830	PLEC	100	93.882	ENSRROG00000015881	PLEC	100	93.882	Rhinopithecus_roxellana
ENSCLAG00000012830	PLEC	100	91.240	ENSSBOG00000025259	PLEC	100	91.256	Saimiri_boliviensis_boliviensis
ENSCLAG00000012830	PLEC	99	77.719	ENSSHAG00000009020	PLEC	99	79.609	Sarcophilus_harrisii
ENSCLAG00000012830	PLEC	96	90.223	ENSTTRG00000010427	PLEC	95	90.223	Tursiops_truncatus
ENSCLAG00000012830	PLEC	100	92.198	ENSVVUG00000010214	PLEC	100	92.198	Vulpes_vulpes