EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000012865 (Gene tree)
Gene ID: 102024989
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 9758 bases
Position: chrJH721928.1:4844747-4854504
Accession: 102024989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018772	RRM_1	PF00076.22	5.6e-18	1	1
ENSCLAP00000018771	RRM_1	PF00076.22	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000018957	RBM42-202	1823	XM_005400070	ENSCLAP00000018772	452 (aa)	XP_005400127	-
ENSCLAT00000018956	RBM42-201	1701	XM_005400071	ENSCLAP00000018771	481 (aa)	XP_005400128	-

Gene Model

Click here to download ENSCLAG00000012865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012865	RBM42	99	97.561	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSCLAG00000012865	RBM42	99	96.660	ENSAMEG00000000524	RBM42	100	96.660	Ailuropoda_melanoleuca
ENSCLAG00000012865	RBM42	99	96.855	ENSANAG00000027537	RBM42	100	96.855	Aotus_nancymaae
ENSCLAG00000012865	RBM42	99	97.065	ENSBTAG00000013440	RBM42	100	97.065	Bos_taurus
ENSCLAG00000012865	RBM42	99	97.768	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSCLAG00000012865	RBM42	99	90.776	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSCLAG00000012865	RBM42	99	97.321	ENSCHIG00000009518	RBM42	100	97.321	Capra_hircus
ENSCLAG00000012865	RBM42	99	96.862	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSCLAG00000012865	RBM42	80	98.964	ENSCAPG00000009566	RBM42	99	98.964	Cavia_aperea
ENSCLAG00000012865	RBM42	100	98.753	ENSCPOG00000012365	RBM42	100	98.753	Cavia_porcellus
ENSCLAG00000012865	RBM42	99	97.484	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSCLAG00000012865	RBM42	99	97.118	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSCLAG00000012865	RBM42	99	97.118	ENSCSAG00000004422	RBM42	100	97.118	Chlorocebus_sabaeus
ENSCLAG00000012865	RBM42	99	87.421	ENSCANG00000030272	RBM42	100	87.421	Colobus_angolensis_palliatus
ENSCLAG00000012865	RBM42	100	96.018	ENSCGRG00001018540	Rbm42	100	96.018	Cricetulus_griseus_chok1gshd
ENSCLAG00000012865	RBM42	99	96.231	ENSDNOG00000037397	RBM42	100	96.231	Dasypus_novemcinctus
ENSCLAG00000012865	RBM42	100	96.460	ENSDORG00000013001	Rbm42	100	96.460	Dipodomys_ordii
ENSCLAG00000012865	RBM42	75	94.203	ENSETEG00000007878	RBM42	72	93.333	Echinops_telfairi
ENSCLAG00000012865	RBM42	99	97.545	ENSEASG00005001074	RBM42	100	97.545	Equus_asinus_asinus
ENSCLAG00000012865	RBM42	99	97.545	ENSECAG00000018215	RBM42	100	97.545	Equus_caballus
ENSCLAG00000012865	RBM42	99	97.694	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSCLAG00000012865	RBM42	100	97.577	ENSFDAG00000007440	RBM42	100	97.577	Fukomys_damarensis
ENSCLAG00000012865	RBM42	99	97.339	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSCLAG00000012865	RBM42	100	96.681	ENSHGLG00000008418	RBM42	100	96.681	Heterocephalus_glaber_female
ENSCLAG00000012865	RBM42	100	96.681	ENSHGLG00100018667	RBM42	100	96.681	Heterocephalus_glaber_male
ENSCLAG00000012865	RBM42	100	98.673	ENSSTOG00000013050	RBM42	100	98.673	Ictidomys_tridecemlineatus
ENSCLAG00000012865	RBM42	100	95.796	ENSJJAG00000010421	Rbm42	100	95.796	Jaculus_jaculus
ENSCLAG00000012865	RBM42	97	92.094	ENSLAFG00000014993	RBM42	97	90.812	Loxodonta_africana
ENSCLAG00000012865	RBM42	99	97.118	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSCLAG00000012865	RBM42	99	97.105	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSCLAG00000012865	RBM42	99	97.118	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSCLAG00000012865	RBM42	99	97.339	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSCLAG00000012865	RBM42	99	97.904	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSCLAG00000012865	RBM42	100	96.460	ENSMOCG00000000405	Rbm42	100	96.460	Microtus_ochrogaster
ENSCLAG00000012865	RBM42	99	96.674	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.674	Mus_caroli
ENSCLAG00000012865	RBM42	99	96.674	ENSMUSG00000036733	Rbm42	99	96.674	Mus_musculus
ENSCLAG00000012865	RBM42	99	97.118	MGP_PahariEiJ_G0012770	Rbm42	99	97.118	Mus_pahari
ENSCLAG00000012865	RBM42	99	96.674	MGP_SPRETEiJ_G0030632	Rbm42	99	96.674	Mus_spretus
ENSCLAG00000012865	RBM42	99	97.768	ENSMPUG00000006288	RBM42	100	97.768	Mustela_putorius_furo
ENSCLAG00000012865	RBM42	99	96.226	ENSMLUG00000011334	RBM42	98	96.368	Myotis_lucifugus
ENSCLAG00000012865	RBM42	100	96.681	ENSNGAG00000019698	Rbm42	100	96.681	Nannospalax_galili
ENSCLAG00000012865	RBM42	69	97.305	ENSNLEG00000011272	-	94	90.503	Nomascus_leucogenys
ENSCLAG00000012865	RBM42	95	82.035	ENSMEUG00000016300	RBM42	98	83.475	Notamacropus_eugenii
ENSCLAG00000012865	RBM42	99	94.130	ENSOPRG00000001229	RBM42	98	88.675	Ochotona_princeps
ENSCLAG00000012865	RBM42	99	99.167	ENSODEG00000013705	RBM42	99	99.167	Octodon_degus
ENSCLAG00000012865	RBM42	99	97.118	ENSOCUG00000003337	RBM42	100	97.118	Oryctolagus_cuniculus
ENSCLAG00000012865	RBM42	99	96.436	ENSOGAG00000004144	RBM42	100	96.436	Otolemur_garnettii
ENSCLAG00000012865	RBM42	97	88.651	ENSOARG00000004926	RBM42	96	91.863	Ovis_aries
ENSCLAG00000012865	RBM42	99	97.768	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSCLAG00000012865	RBM42	99	97.694	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSCLAG00000012865	RBM42	99	97.275	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSCLAG00000012865	RBM42	99	97.339	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSCLAG00000012865	RBM42	99	96.855	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSCLAG00000012865	RBM42	100	96.903	ENSPEMG00000012065	Rbm42	100	96.903	Peromyscus_maniculatus_bairdii
ENSCLAG00000012865	RBM42	99	96.082	ENSPPYG00000009871	RBM42	100	96.082	Pongo_abelii
ENSCLAG00000012865	RBM42	88	95.082	ENSPCAG00000013053	RBM42	98	81.410	Procavia_capensis
ENSCLAG00000012865	RBM42	69	97.598	ENSPCOG00000020672	RBM42	81	97.598	Propithecus_coquereli
ENSCLAG00000012865	RBM42	99	97.904	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSCLAG00000012865	RBM42	99	96.855	ENSPVAG00000012815	RBM42	100	96.855	Pteropus_vampyrus
ENSCLAG00000012865	RBM42	99	96.896	ENSRNOG00000024278	Rbm42	99	96.896	Rattus_norvegicus
ENSCLAG00000012865	RBM42	99	97.118	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSCLAG00000012865	RBM42	99	97.768	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSCLAG00000012865	RBM42	84	97.783	ENSSBOG00000030666	RBM42	100	97.783	Saimiri_boliviensis_boliviensis
ENSCLAG00000012865	RBM42	99	87.292	ENSSARG00000010724	RBM42	100	87.292	Sorex_araneus
ENSCLAG00000012865	RBM42	99	97.098	ENSSSCG00000002905	RBM42	100	97.098	Sus_scrofa
ENSCLAG00000012865	RBM42	99	97.545	ENSUAMG00000020711	RBM42	100	97.545	Ursus_americanus
ENSCLAG00000012865	RBM42	99	97.275	ENSUMAG00000020223	RBM42	100	97.275	Ursus_maritimus
ENSCLAG00000012865	RBM42	99	97.545	ENSVVUG00000015117	RBM42	100	97.545	Vulpes_vulpes