EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000012957 (Gene tree)
Gene ID: 102028015
Gene Symbol: -
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 31474 bases
Position: chrJH721897.1:22086704-22118177
Accession: 102028015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000018920	GUCT	PF08152.12	1.4e-28	1	1
ENSCLAP00000018920	ResIII	PF04851.15	3e-10	1	1
ENSCLAP00000018920	DEAD	PF00270.29	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000019105	-	2628	XM_005390102	ENSCLAP00000018920	736 (aa)	XP_005390159	UPI00038EFF3C

Gene Model

Click here to download ENSCLAG00000012957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000012957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000012957	-	55	33.649	ENSCLAG00000008075	DDX27	52	33.493
ENSCLAG00000012957	-	85	63.968	ENSCLAG00000012235	DDX21	72	68.402
ENSCLAG00000012957	-	51	32.494	ENSCLAG00000015856	DDX47	77	33.333
ENSCLAG00000012957	-	50	32.075	ENSCLAG00000014891	EIF4A2	90	31.487
ENSCLAG00000012957	-	50	32.888	ENSCLAG00000014502	EIF4A3	86	32.888
ENSCLAG00000012957	-	52	30.976	ENSCLAG00000015793	DDX25	71	31.283
ENSCLAG00000012957	-	50	87.534	ENSCLAG00000001553	-	79	88.710
ENSCLAG00000012957	-	50	34.278	ENSCLAG00000004684	DDX18	56	34.278
ENSCLAG00000012957	-	97	72.714	ENSCLAG00000001938	-	91	73.006

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000012957	-	100	97.829	ENSG00000107625	DDX50	100	97.829	Homo_sapiens
ENSCLAG00000012957	-	100	96.883	ENSAMEG00000017992	DDX50	100	96.883	Ailuropoda_melanoleuca
ENSCLAG00000012957	-	92	77.569	ENSANAG00000017785	-	91	77.424	Aotus_nancymaae
ENSCLAG00000012957	-	100	97.151	ENSBTAG00000033413	DDX50	100	97.151	Bos_taurus
ENSCLAG00000012957	-	100	97.965	ENSCJAG00000018844	DDX50	100	97.965	Callithrix_jacchus
ENSCLAG00000012957	-	100	97.290	ENSCAFG00000013776	DDX50	100	97.290	Canis_familiaris
ENSCLAG00000012957	-	100	97.290	ENSCAFG00020025977	DDX50	99	97.290	Canis_lupus_dingo
ENSCLAG00000012957	-	100	97.015	ENSCHIG00000000285	DDX50	99	97.015	Capra_hircus
ENSCLAG00000012957	-	100	97.151	ENSTSYG00000004192	DDX50	99	98.396	Carlito_syrichta
ENSCLAG00000012957	-	100	80.027	ENSCAPG00000007230	-	100	80.027	Cavia_aperea
ENSCLAG00000012957	-	100	98.370	ENSCPOG00000002131	-	100	98.370	Cavia_porcellus
ENSCLAG00000012957	-	91	89.286	ENSCCAG00000030543	DDX50	100	89.286	Cebus_capucinus
ENSCLAG00000012957	-	99	95.380	ENSCATG00000032463	DDX50	99	95.380	Cercocebus_atys
ENSCLAG00000012957	-	98	72.299	ENSCATG00000035153	-	89	89.655	Cercocebus_atys
ENSCLAG00000012957	-	99	66.351	ENSCATG00000039259	-	89	67.254	Cercocebus_atys
ENSCLAG00000012957	-	100	97.965	ENSCSAG00000007703	DDX50	100	97.965	Chlorocebus_sabaeus
ENSCLAG00000012957	-	88	95.223	ENSCHOG00000000233	DDX50	97	95.069	Choloepus_hoffmanni
ENSCLAG00000012957	-	96	68.951	ENSCANG00000028077	-	91	67.742	Colobus_angolensis_palliatus
ENSCLAG00000012957	-	100	83.989	ENSCANG00000036450	-	100	83.989	Colobus_angolensis_palliatus
ENSCLAG00000012957	-	86	72.240	ENSCANG00000018820	-	88	72.870	Colobus_angolensis_palliatus
ENSCLAG00000012957	-	92	95.421	ENSCGRG00001020223	Ddx50	92	95.421	Cricetulus_griseus_chok1gshd
ENSCLAG00000012957	-	92	95.549	ENSCGRG00000015884	Ddx50	92	95.421	Cricetulus_griseus_crigri
ENSCLAG00000012957	-	88	90.108	ENSDNOG00000001675	DDX50	100	90.108	Dasypus_novemcinctus
ENSCLAG00000012957	-	100	96.744	ENSDORG00000007310	Ddx50	100	96.744	Dipodomys_ordii
ENSCLAG00000012957	-	90	97.566	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSCLAG00000012957	-	100	96.879	ENSEASG00005015595	DDX50	99	96.879	Equus_asinus_asinus
ENSCLAG00000012957	-	100	97.015	ENSECAG00000023044	DDX50	99	97.015	Equus_caballus
ENSCLAG00000012957	-	89	95.687	ENSEEUG00000005782	DDX50	79	98.559	Erinaceus_europaeus
ENSCLAG00000012957	-	100	97.696	ENSFCAG00000012678	DDX50	99	97.696	Felis_catus
ENSCLAG00000012957	-	92	91.150	ENSFDAG00000016109	-	91	90.708	Fukomys_damarensis
ENSCLAG00000012957	-	52	71.094	ENSGGOG00000022568	-	90	79.503	Gorilla_gorilla
ENSCLAG00000012957	-	100	97.829	ENSGGOG00000010100	DDX50	99	99.465	Gorilla_gorilla
ENSCLAG00000012957	-	51	82.275	ENSGGOG00000041063	-	82	84.953	Gorilla_gorilla
ENSCLAG00000012957	-	100	97.015	ENSHGLG00000013466	DDX50	100	97.015	Heterocephalus_glaber_female
ENSCLAG00000012957	-	100	97.015	ENSHGLG00100017191	DDX50	100	97.015	Heterocephalus_glaber_male
ENSCLAG00000012957	-	82	88.830	ENSHGLG00100006568	-	92	88.830	Heterocephalus_glaber_male
ENSCLAG00000012957	-	100	96.341	ENSSTOG00000021852	-	100	96.341	Ictidomys_tridecemlineatus
ENSCLAG00000012957	-	100	94.980	ENSJJAG00000023928	-	92	94.838	Jaculus_jaculus
ENSCLAG00000012957	-	100	73.684	ENSJJAG00000019626	-	91	74.135	Jaculus_jaculus
ENSCLAG00000012957	-	100	97.015	ENSLAFG00000006186	DDX50	100	97.015	Loxodonta_africana
ENSCLAG00000012957	-	98	71.706	ENSMFAG00000045339	-	89	88.715	Macaca_fascicularis
ENSCLAG00000012957	-	100	97.965	ENSMFAG00000044067	DDX50	100	97.965	Macaca_fascicularis
ENSCLAG00000012957	-	100	97.965	ENSMMUG00000001006	DDX50	100	98.661	Macaca_mulatta
ENSCLAG00000012957	-	88	67.233	ENSMMUG00000045343	-	81	67.622	Macaca_mulatta
ENSCLAG00000012957	-	92	90.855	ENSMNEG00000031664	DDX50	92	90.708	Macaca_nemestrina
ENSCLAG00000012957	-	98	72.928	ENSMNEG00000045530	-	89	89.969	Macaca_nemestrina
ENSCLAG00000012957	-	100	96.065	ENSMLEG00000037313	DDX50	100	96.065	Mandrillus_leucophaeus
ENSCLAG00000012957	-	86	84.112	ENSMLEG00000041988	-	89	87.597	Mandrillus_leucophaeus
ENSCLAG00000012957	-	56	94.189	ENSMAUG00000022192	Ddx50	100	93.447	Mesocricetus_auratus
ENSCLAG00000012957	-	100	89.688	ENSMICG00000017539	DDX50	100	89.688	Microcebus_murinus
ENSCLAG00000012957	-	92	95.588	ENSMOCG00000001676	Ddx50	92	94.551	Microtus_ochrogaster
ENSCLAG00000012957	-	92	80.645	ENSMODG00000010741	DDX50	92	80.848	Monodelphis_domestica
ENSCLAG00000012957	-	100	95.652	MGP_CAROLIEiJ_G0015389	Ddx50	100	95.652	Mus_caroli
ENSCLAG00000012957	-	100	95.924	ENSMUSG00000020076	Ddx50	100	95.924	Mus_musculus
ENSCLAG00000012957	-	100	96.060	MGP_PahariEiJ_G0030805	Ddx50	100	96.060	Mus_pahari
ENSCLAG00000012957	-	100	95.924	MGP_SPRETEiJ_G0016200	Ddx50	100	95.924	Mus_spretus
ENSCLAG00000012957	-	88	96.909	ENSMPUG00000004589	DDX50	99	96.909	Mustela_putorius_furo
ENSCLAG00000012957	-	92	95.428	ENSMLUG00000017590	DDX50	92	95.280	Myotis_lucifugus
ENSCLAG00000012957	-	100	97.286	ENSNGAG00000004283	Ddx50	100	97.286	Nannospalax_galili
ENSCLAG00000012957	-	100	97.829	ENSNLEG00000011631	DDX50	100	97.829	Nomascus_leucogenys
ENSCLAG00000012957	-	89	67.629	ENSNLEG00000035506	-	88	78.193	Nomascus_leucogenys
ENSCLAG00000012957	-	92	94.535	ENSOPRG00000001619	DDX50	92	94.535	Ochotona_princeps
ENSCLAG00000012957	-	100	98.370	ENSODEG00000014597	-	100	98.370	Octodon_degus
ENSCLAG00000012957	-	93	67.049	ENSOANG00000004776	DDX50	76	71.357	Ornithorhynchus_anatinus
ENSCLAG00000012957	-	95	94.109	ENSOCUG00000002879	DDX50	95	95.569	Oryctolagus_cuniculus
ENSCLAG00000012957	-	100	97.286	ENSOGAG00000001844	DDX50	100	97.286	Otolemur_garnettii
ENSCLAG00000012957	-	100	97.015	ENSOARG00000005264	DDX50	99	97.015	Ovis_aries
ENSCLAG00000012957	-	100	97.693	ENSPPAG00000040723	DDX50	100	97.693	Pan_paniscus
ENSCLAG00000012957	-	52	71.053	ENSPPAG00000026788	-	89	79.560	Pan_paniscus
ENSCLAG00000012957	-	100	97.696	ENSPPRG00000015826	DDX50	100	97.696	Panthera_pardus
ENSCLAG00000012957	-	100	97.696	ENSPTIG00000008454	DDX50	100	97.696	Panthera_tigris_altaica
ENSCLAG00000012957	-	100	97.693	ENSPTRG00000002562	DDX50	100	97.693	Pan_troglodytes
ENSCLAG00000012957	-	52	71.053	ENSPTRG00000044913	-	99	72.105	Pan_troglodytes
ENSCLAG00000012957	-	92	89.971	ENSPANG00000022143	-	92	89.676	Papio_anubis
ENSCLAG00000012957	-	92	94.535	ENSPEMG00000020899	-	92	94.535	Peromyscus_maniculatus_bairdii
ENSCLAG00000012957	-	92	80.265	ENSPCIG00000016036	DDX50	93	81.679	Phascolarctos_cinereus
ENSCLAG00000012957	-	91	98.512	ENSPPYG00000002390	DDX50	100	98.512	Pongo_abelii
ENSCLAG00000012957	-	84	82.305	ENSPCAG00000009692	DDX50	100	82.305	Procavia_capensis
ENSCLAG00000012957	-	79	86.364	ENSPCOG00000012574	DDX50	90	86.667	Propithecus_coquereli
ENSCLAG00000012957	-	86	93.939	ENSPVAG00000009519	DDX50	78	94.490	Pteropus_vampyrus
ENSCLAG00000012957	-	100	95.652	ENSRNOG00000000396	Ddx50	98	98.396	Rattus_norvegicus
ENSCLAG00000012957	-	87	95.956	ENSRBIG00000042841	-	98	98.270	Rhinopithecus_bieti
ENSCLAG00000012957	-	99	67.118	ENSRBIG00000039673	-	90	65.588	Rhinopithecus_bieti
ENSCLAG00000012957	-	99	68.306	ENSRBIG00000036573	-	92	67.608	Rhinopithecus_bieti
ENSCLAG00000012957	-	100	97.693	ENSRROG00000032158	DDX50	100	97.693	Rhinopithecus_roxellana
ENSCLAG00000012957	-	99	65.714	ENSRROG00000022853	-	91	64.593	Rhinopithecus_roxellana
ENSCLAG00000012957	-	52	71.018	ENSRROG00000031940	-	87	75.077	Rhinopithecus_roxellana
ENSCLAG00000012957	-	92	86.136	ENSSBOG00000014441	DDX50	99	87.302	Saimiri_boliviensis_boliviensis
ENSCLAG00000012957	-	79	67.780	ENSSHAG00000005334	-	79	67.330	Sarcophilus_harrisii
ENSCLAG00000012957	-	88	81.279	ENSSHAG00000005690	DDX50	91	81.818	Sarcophilus_harrisii
ENSCLAG00000012957	-	100	79.919	ENSSARG00000013553	DDX50	88	87.442	Sorex_araneus
ENSCLAG00000012957	-	100	96.065	ENSSSCG00000010246	DDX50	92	95.870	Sus_scrofa
ENSCLAG00000012957	-	96	75.211	ENSTBEG00000001085	DDX50	92	74.298	Tupaia_belangeri
ENSCLAG00000012957	-	100	90.638	ENSTTRG00000012408	DDX50	99	90.638	Tursiops_truncatus
ENSCLAG00000012957	-	100	97.154	ENSUAMG00000010976	DDX50	99	98.976	Ursus_americanus
ENSCLAG00000012957	-	100	97.154	ENSUMAG00000007726	DDX50	99	97.154	Ursus_maritimus
ENSCLAG00000012957	-	100	96.744	ENSVPAG00000000626	DDX50	100	96.744	Vicugna_pacos
ENSCLAG00000012957	-	82	91.542	ENSVVUG00000020366	DDX50	98	99.198	Vulpes_vulpes