EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000013080 (Gene tree)
Gene ID: 102021084
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 9627 bases
Position: chrJH721913.1:4154627-4164253
Accession: 102021084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000019096	RRM_1	PF00076.22	4e-58	1	4
ENSCLAP00000019096	RRM_1	PF00076.22	4e-58	2	4
ENSCLAP00000019096	RRM_1	PF00076.22	4e-58	3	4
ENSCLAP00000019096	RRM_1	PF00076.22	4e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000019281	NCL-201	2697	XM_005395394	ENSCLAP00000019096	716 (aa)	XP_005395451	UPI00038ED77A

Gene Model

Click here to download ENSCLAG00000013080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013080	NCL	92	83.587	ENSG00000115053	NCL	100	89.189	Homo_sapiens
ENSCLAG00000013080	NCL	61	94.305	ENSAMEG00000016289	NCL	92	83.207	Ailuropoda_melanoleuca
ENSCLAG00000013080	NCL	99	68.034	ENSANAG00000024378	-	85	73.684	Aotus_nancymaae
ENSCLAG00000013080	NCL	62	90.562	ENSANAG00000035814	-	100	85.853	Aotus_nancymaae
ENSCLAG00000013080	NCL	79	89.706	ENSBTAG00000051320	-	73	87.793	Bos_taurus
ENSCLAG00000013080	NCL	54	88.115	ENSBTAG00000050728	-	81	88.115	Bos_taurus
ENSCLAG00000013080	NCL	68	89.583	ENSBTAG00000026909	-	85	89.958	Bos_taurus
ENSCLAG00000013080	NCL	94	79.826	ENSBTAG00000016174	NCL	92	81.737	Bos_taurus
ENSCLAG00000013080	NCL	62	90.337	ENSCJAG00000013538	NCL	100	84.945	Callithrix_jacchus
ENSCLAG00000013080	NCL	100	82.639	ENSCAFG00000011037	NCL	92	82.879	Canis_familiaris
ENSCLAG00000013080	NCL	84	82.208	ENSCAFG00020023145	NCL	89	83.690	Canis_lupus_dingo
ENSCLAG00000013080	NCL	92	73.946	ENSCHIG00000026149	-	93	74.063	Capra_hircus
ENSCLAG00000013080	NCL	92	94.248	ENSCHIG00000021052	-	94	94.425	Capra_hircus
ENSCLAG00000013080	NCL	85	82.927	ENSCHIG00000010894	-	100	84.741	Capra_hircus
ENSCLAG00000013080	NCL	92	61.738	ENSCHIG00000012143	-	92	68.079	Capra_hircus
ENSCLAG00000013080	NCL	71	80.186	ENSTSYG00000036886	-	87	78.912	Carlito_syrichta
ENSCLAG00000013080	NCL	92	83.156	ENSTSYG00000004355	-	92	82.246	Carlito_syrichta
ENSCLAG00000013080	NCL	95	80.690	ENSTSYG00000029779	-	98	79.316	Carlito_syrichta
ENSCLAG00000013080	NCL	99	88.451	ENSCAPG00000009405	NCL	100	88.028	Cavia_aperea
ENSCLAG00000013080	NCL	92	91.006	ENSCPOG00000001034	NCL	100	91.341	Cavia_porcellus
ENSCLAG00000013080	NCL	53	94.987	ENSCCAG00000021040	-	100	83.634	Cebus_capucinus
ENSCLAG00000013080	NCL	55	86.935	ENSCCAG00000000551	-	93	87.065	Cebus_capucinus
ENSCLAG00000013080	NCL	92	84.779	ENSCATG00000037033	NCL	100	86.611	Cercocebus_atys
ENSCLAG00000013080	NCL	53	94.737	ENSCSAG00000006660	NCL	95	95.444	Chlorocebus_sabaeus
ENSCLAG00000013080	NCL	61	73.684	ENSCHOG00000012860	NCL	88	72.893	Choloepus_hoffmanni
ENSCLAG00000013080	NCL	92	65.414	ENSCGRG00001022350	-	95	67.068	Cricetulus_griseus_chok1gshd
ENSCLAG00000013080	NCL	92	77.812	ENSCGRG00001024315	-	91	79.456	Cricetulus_griseus_chok1gshd
ENSCLAG00000013080	NCL	92	65.471	ENSCGRG00000000507	-	93	64.662	Cricetulus_griseus_crigri
ENSCLAG00000013080	NCL	85	80.775	ENSCGRG00000017894	-	88	81.422	Cricetulus_griseus_crigri
ENSCLAG00000013080	NCL	92	83.056	ENSDNOG00000010783	-	100	82.940	Dasypus_novemcinctus
ENSCLAG00000013080	NCL	100	72.423	ENSDNOG00000046347	-	99	71.448	Dasypus_novemcinctus
ENSCLAG00000013080	NCL	51	73.770	ENSDORG00000023596	-	92	67.431	Dipodomys_ordii
ENSCLAG00000013080	NCL	92	74.581	ENSDORG00000012513	-	91	75.342	Dipodomys_ordii
ENSCLAG00000013080	NCL	53	88.421	ENSETEG00000018937	-	85	77.236	Echinops_telfairi
ENSCLAG00000013080	NCL	62	59.685	ENSETEG00000008553	-	88	60.181	Echinops_telfairi
ENSCLAG00000013080	NCL	53	88.329	ENSETEG00000014756	-	86	88.391	Echinops_telfairi
ENSCLAG00000013080	NCL	71	65.312	ENSETEG00000008139	-	89	65.135	Echinops_telfairi
ENSCLAG00000013080	NCL	98	82.037	ENSEASG00005008488	NCL	100	96.786	Equus_asinus_asinus
ENSCLAG00000013080	NCL	100	82.573	ENSECAG00000021868	NCL	92	83.560	Equus_caballus
ENSCLAG00000013080	NCL	85	78.595	ENSEEUG00000005913	NCL	85	78.105	Erinaceus_europaeus
ENSCLAG00000013080	NCL	100	83.911	ENSFCAG00000027622	NCL	92	82.602	Felis_catus
ENSCLAG00000013080	NCL	91	89.877	ENSFDAG00000014291	NCL	100	90.028	Fukomys_damarensis
ENSCLAG00000013080	NCL	92	84.043	ENSGGOG00000004300	NCL	100	91.531	Gorilla_gorilla
ENSCLAG00000013080	NCL	92	90.122	ENSHGLG00000002031	-	100	90.251	Heterocephalus_glaber_female
ENSCLAG00000013080	NCL	91	80.305	ENSHGLG00000011069	-	92	78.843	Heterocephalus_glaber_female
ENSCLAG00000013080	NCL	73	84.810	ENSHGLG00100000745	-	82	88.859	Heterocephalus_glaber_male
ENSCLAG00000013080	NCL	92	89.970	ENSHGLG00100014537	-	100	89.694	Heterocephalus_glaber_male
ENSCLAG00000013080	NCL	55	81.074	ENSJJAG00000016165	Ncl	93	74.661	Jaculus_jaculus
ENSCLAG00000013080	NCL	91	70.884	ENSLAFG00000013061	NCL	91	69.301	Loxodonta_africana
ENSCLAG00000013080	NCL	92	85.106	ENSMFAG00000040385	NCL	100	86.769	Macaca_fascicularis
ENSCLAG00000013080	NCL	92	85.106	ENSMMUG00000018094	NCL	95	97.500	Macaca_mulatta
ENSCLAG00000013080	NCL	62	91.855	ENSMNEG00000023839	NCL	100	91.558	Macaca_nemestrina
ENSCLAG00000013080	NCL	92	84.932	ENSMLEG00000028935	NCL	100	86.611	Mandrillus_leucophaeus
ENSCLAG00000013080	NCL	100	83.124	ENSMICG00000002538	-	92	82.496	Microcebus_murinus
ENSCLAG00000013080	NCL	92	66.717	ENSMICG00000029975	-	86	77.255	Microcebus_murinus
ENSCLAG00000013080	NCL	92	74.203	MGP_CAROLIEiJ_G0014362	Ncl	92	74.394	Mus_caroli
ENSCLAG00000013080	NCL	92	74.962	ENSMUSG00000026234	Ncl	92	75.152	Mus_musculus
ENSCLAG00000013080	NCL	92	73.979	MGP_PahariEiJ_G0027599	Ncl	92	75.643	Mus_pahari
ENSCLAG00000013080	NCL	92	74.545	MGP_SPRETEiJ_G0015164	Ncl	92	75.606	Mus_spretus
ENSCLAG00000013080	NCL	92	83.156	ENSMLUG00000014547	NCL	92	82.701	Myotis_lucifugus
ENSCLAG00000013080	NCL	53	71.504	ENSNGAG00000006188	-	54	71.504	Nannospalax_galili
ENSCLAG00000013080	NCL	92	78.326	ENSNGAG00000002454	-	91	77.511	Nannospalax_galili
ENSCLAG00000013080	NCL	86	73.551	ENSNLEG00000014107	-	95	75.499	Nomascus_leucogenys
ENSCLAG00000013080	NCL	91	88.685	ENSODEG00000003281	-	91	88.702	Octodon_degus
ENSCLAG00000013080	NCL	65	88.136	ENSODEG00000002441	-	88	88.136	Octodon_degus
ENSCLAG00000013080	NCL	99	72.291	ENSODEG00000007803	-	100	71.581	Octodon_degus
ENSCLAG00000013080	NCL	92	76.256	ENSOCUG00000004312	NCL	100	78.243	Oryctolagus_cuniculus
ENSCLAG00000013080	NCL	73	86.016	ENSOGAG00000027852	NCL	84	86.016	Otolemur_garnettii
ENSCLAG00000013080	NCL	76	83.505	ENSOARG00000013270	-	100	87.912	Ovis_aries
ENSCLAG00000013080	NCL	91	77.217	ENSOARG00000020709	-	92	77.307	Ovis_aries
ENSCLAG00000013080	NCL	54	76.166	ENSOARG00000004072	-	92	65.196	Ovis_aries
ENSCLAG00000013080	NCL	69	87.215	ENSOARG00000013710	-	94	73.984	Ovis_aries
ENSCLAG00000013080	NCL	92	83.283	ENSPPAG00000011619	NCL	100	91.531	Pan_paniscus
ENSCLAG00000013080	NCL	100	83.611	ENSPPRG00000012603	NCL	92	82.273	Panthera_pardus
ENSCLAG00000013080	NCL	91	81.804	ENSPTIG00000010393	NCL	99	83.473	Panthera_tigris_altaica
ENSCLAG00000013080	NCL	92	84.522	ENSPTRG00000013025	NCL	100	91.857	Pan_troglodytes
ENSCLAG00000013080	NCL	92	85.106	ENSPANG00000010292	NCL	100	86.769	Papio_anubis
ENSCLAG00000013080	NCL	100	79.778	ENSPPYG00000013265	NCL	92	79.819	Pongo_abelii
ENSCLAG00000013080	NCL	91	78.593	ENSPCOG00000004160	-	86	87.566	Propithecus_coquereli
ENSCLAG00000013080	NCL	92	84.522	ENSPCOG00000003051	-	91	84.977	Propithecus_coquereli
ENSCLAG00000013080	NCL	92	83.030	ENSPVAG00000000297	NCL	100	83.333	Pteropus_vampyrus
ENSCLAG00000013080	NCL	92	76.621	ENSRNOG00000018273	Ncl	92	78.733	Rattus_norvegicus
ENSCLAG00000013080	NCL	92	81.003	ENSRBIG00000037525	-	91	81.155	Rhinopithecus_bieti
ENSCLAG00000013080	NCL	66	95.502	ENSRBIG00000035396	-	89	93.624	Rhinopithecus_bieti
ENSCLAG00000013080	NCL	92	84.650	ENSRROG00000028756	-	82	96.818	Rhinopithecus_roxellana
ENSCLAG00000013080	NCL	99	81.058	ENSRROG00000036103	-	99	81.643	Rhinopithecus_roxellana
ENSCLAG00000013080	NCL	55	74.429	ENSSBOG00000023094	-	84	74.661	Saimiri_boliviensis_boliviensis
ENSCLAG00000013080	NCL	70	84.752	ENSSBOG00000027549	-	97	87.699	Saimiri_boliviensis_boliviensis
ENSCLAG00000013080	NCL	92	81.297	ENSSBOG00000029193	-	100	85.992	Saimiri_boliviensis_boliviensis
ENSCLAG00000013080	NCL	92	81.437	ENSSSCG00000016275	NCL	92	81.315	Sus_scrofa
ENSCLAG00000013080	NCL	88	77.451	ENSTBEG00000001546	-	85	77.451	Tupaia_belangeri
ENSCLAG00000013080	NCL	73	75.610	ENSTBEG00000002469	-	66	80.286	Tupaia_belangeri
ENSCLAG00000013080	NCL	92	81.431	ENSTTRG00000009094	NCL	91	82.344	Tursiops_truncatus
ENSCLAG00000013080	NCL	76	87.224	ENSUAMG00000005639	NCL	100	89.264	Ursus_americanus
ENSCLAG00000013080	NCL	100	82.427	ENSUMAG00000015789	NCL	92	82.801	Ursus_maritimus
ENSCLAG00000013080	NCL	68	80.580	ENSVPAG00000001796	NCL	69	80.580	Vicugna_pacos
ENSCLAG00000013080	NCL	100	82.287	ENSVVUG00000025564	NCL	100	82.008	Vulpes_vulpes