EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000013162 (Gene tree)
Gene ID: 102012524
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 11060 bases
Position: chrJH721928.1:7983394-7994453
Accession: 102012524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000019203	UPF0086	PF01868.16	6.2e-27	1	1
ENSCLAP00000019202	UPF0086	PF01868.16	6.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000019389	POP4-202	663	XM_005400114	ENSCLAP00000019203	220 (aa)	XP_005400171	UPI00038EF1E8
ENSCLAT00000019388	POP4-201	2316	XM_005400112	ENSCLAP00000019202	220 (aa)	XP_005400169	-

Gene Model

Click here to download ENSCLAG00000013162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013162	POP4	100	87.273	ENSG00000105171	POP4	100	93.750	Homo_sapiens
ENSCLAG00000013162	POP4	97	74.074	ENSAMEG00000003172	-	97	74.074	Ailuropoda_melanoleuca
ENSCLAG00000013162	POP4	99	86.239	ENSAMEG00000018329	-	99	86.239	Ailuropoda_melanoleuca
ENSCLAG00000013162	POP4	92	63.366	ENSACIG00000008358	pop4	93	65.128	Amphilophus_citrinellus
ENSCLAG00000013162	POP4	89	63.959	ENSAOCG00000010116	pop4	96	62.944	Amphiprion_ocellaris
ENSCLAG00000013162	POP4	94	61.058	ENSAPEG00000002829	pop4	87	60.096	Amphiprion_percula
ENSCLAG00000013162	POP4	89	63.452	ENSATEG00000013028	pop4	92	60.784	Anabas_testudineus
ENSCLAG00000013162	POP4	90	73.096	ENSAPLG00000014051	POP4	95	73.096	Anas_platyrhynchos
ENSCLAG00000013162	POP4	100	85.455	ENSANAG00000020295	POP4	100	85.455	Aotus_nancymaae
ENSCLAG00000013162	POP4	89	63.452	ENSACLG00000000526	pop4	88	62.564	Astatotilapia_calliptera
ENSCLAG00000013162	POP4	100	60.455	ENSAMXG00000002899	pop4	100	60.455	Astyanax_mexicanus
ENSCLAG00000013162	POP4	100	89.545	ENSBTAG00000002223	POP4	100	89.545	Bos_taurus
ENSCLAG00000013162	POP4	100	85.068	ENSCJAG00000046750	POP4	100	87.778	Callithrix_jacchus
ENSCLAG00000013162	POP4	83	90.659	ENSCAFG00000007630	POP4	100	90.659	Canis_familiaris
ENSCLAG00000013162	POP4	100	89.091	ENSCHIG00000016743	POP4	100	89.091	Capra_hircus
ENSCLAG00000013162	POP4	100	87.273	ENSTSYG00000003488	POP4	100	87.273	Carlito_syrichta
ENSCLAG00000013162	POP4	99	74.654	ENSCAPG00000011105	POP4	100	74.654	Cavia_aperea
ENSCLAG00000013162	POP4	100	95.909	ENSCPOG00000002992	POP4	100	95.909	Cavia_porcellus
ENSCLAG00000013162	POP4	100	72.727	ENSCCAG00000034244	-	100	72.727	Cebus_capucinus
ENSCLAG00000013162	POP4	100	86.364	ENSCCAG00000020285	-	100	86.364	Cebus_capucinus
ENSCLAG00000013162	POP4	100	88.182	ENSCATG00000036022	POP4	100	95.833	Cercocebus_atys
ENSCLAG00000013162	POP4	99	88.073	ENSCSAG00000004868	POP4	100	88.073	Chlorocebus_sabaeus
ENSCLAG00000013162	POP4	99	64.516	ENSCHOG00000002071	POP4	100	64.516	Choloepus_hoffmanni
ENSCLAG00000013162	POP4	100	70.455	ENSCPBG00000016132	POP4	100	70.455	Chrysemys_picta_bellii
ENSCLAG00000013162	POP4	85	32.812	ENSCING00000023871	-	94	31.250	Ciona_intestinalis
ENSCLAG00000013162	POP4	90	90.404	ENSCANG00000005924	POP4	98	90.404	Colobus_angolensis_palliatus
ENSCLAG00000013162	POP4	100	85.000	ENSCGRG00001017185	Pop4	100	83.636	Cricetulus_griseus_chok1gshd
ENSCLAG00000013162	POP4	100	85.000	ENSCGRG00000008155	Pop4	100	83.636	Cricetulus_griseus_crigri
ENSCLAG00000013162	POP4	94	52.632	ENSCSEG00000002946	pop4	94	51.923	Cynoglossus_semilaevis
ENSCLAG00000013162	POP4	92	46.078	ENSCVAG00000018602	POP4	87	45.098	Cyprinodon_variegatus
ENSCLAG00000013162	POP4	100	60.909	ENSDARG00000101472	pop4	88	67.526	Danio_rerio
ENSCLAG00000013162	POP4	100	87.273	ENSDNOG00000047663	POP4	88	87.273	Dasypus_novemcinctus
ENSCLAG00000013162	POP4	78	83.140	ENSDORG00000008577	Pop4	100	83.140	Dipodomys_ordii
ENSCLAG00000013162	POP4	79	35.326	FBgn0035831	CG8038	71	39.041	Drosophila_melanogaster
ENSCLAG00000013162	POP4	99	72.350	ENSETEG00000003607	POP4	100	72.350	Echinops_telfairi
ENSCLAG00000013162	POP4	100	40.773	ENSEBUG00000004305	pop4	100	40.773	Eptatretus_burgeri
ENSCLAG00000013162	POP4	91	47.196	ENSEBUG00000010447	pop4	83	47.196	Eptatretus_burgeri
ENSCLAG00000013162	POP4	100	43.891	ENSEBUG00000008575	pop4	100	43.439	Eptatretus_burgeri
ENSCLAG00000013162	POP4	100	86.857	ENSECAG00000020206	POP4	82	84.615	Equus_caballus
ENSCLAG00000013162	POP4	90	65.482	ENSEEUG00000013109	POP4	99	65.482	Erinaceus_europaeus
ENSCLAG00000013162	POP4	89	65.306	ENSELUG00000019812	pop4	89	63.776	Esox_lucius
ENSCLAG00000013162	POP4	100	86.818	ENSFCAG00000001619	POP4	100	86.818	Felis_catus
ENSCLAG00000013162	POP4	98	68.056	ENSFALG00000000206	POP4	96	68.056	Ficedula_albicollis
ENSCLAG00000013162	POP4	100	95.455	ENSFDAG00000017859	POP4	100	95.455	Fukomys_damarensis
ENSCLAG00000013162	POP4	90	58.000	ENSFHEG00000012745	pop4	90	57.000	Fundulus_heteroclitus
ENSCLAG00000013162	POP4	91	63.366	ENSGMOG00000000335	pop4	99	62.871	Gadus_morhua
ENSCLAG00000013162	POP4	100	66.818	ENSGALG00000041972	POP4	92	67.431	Gallus_gallus
ENSCLAG00000013162	POP4	78	50.575	ENSGAFG00000003571	pop4	96	50.575	Gambusia_affinis
ENSCLAG00000013162	POP4	94	59.809	ENSGACG00000014510	pop4	93	66.860	Gasterosteus_aculeatus
ENSCLAG00000013162	POP4	100	71.818	ENSGAGG00000024544	POP4	79	71.818	Gopherus_agassizii
ENSCLAG00000013162	POP4	100	87.727	ENSGGOG00000038346	POP4	100	87.727	Gorilla_gorilla
ENSCLAG00000013162	POP4	89	63.452	ENSHBUG00000021821	pop4	88	62.564	Haplochromis_burtoni
ENSCLAG00000013162	POP4	100	95.455	ENSHGLG00000015798	POP4	100	95.455	Heterocephalus_glaber_female
ENSCLAG00000013162	POP4	100	95.000	ENSHGLG00100009737	POP4	100	95.000	Heterocephalus_glaber_male
ENSCLAG00000013162	POP4	89	62.564	ENSHCOG00000020937	pop4	88	62.564	Hippocampus_comes
ENSCLAG00000013162	POP4	100	60.000	ENSIPUG00000013652	pop4	100	60.000	Ictalurus_punctatus
ENSCLAG00000013162	POP4	100	90.455	ENSSTOG00000011016	POP4	100	90.455	Ictidomys_tridecemlineatus
ENSCLAG00000013162	POP4	100	91.818	ENSJJAG00000013376	Pop4	100	91.818	Jaculus_jaculus
ENSCLAG00000013162	POP4	98	61.009	ENSKMAG00000012250	pop4	98	60.092	Kryptolebias_marmoratus
ENSCLAG00000013162	POP4	99	56.364	ENSLBEG00000014139	pop4	99	56.364	Labrus_bergylta
ENSCLAG00000013162	POP4	99	56.364	ENSLBEG00000018846	-	99	56.364	Labrus_bergylta
ENSCLAG00000013162	POP4	100	62.727	ENSLACG00000008581	POP4	99	62.727	Latimeria_chalumnae
ENSCLAG00000013162	POP4	100	66.818	ENSLOCG00000005597	pop4	100	66.818	Lepisosteus_oculatus
ENSCLAG00000013162	POP4	99	88.940	ENSLAFG00000000084	POP4	99	88.940	Loxodonta_africana
ENSCLAG00000013162	POP4	100	87.727	ENSMFAG00000029606	POP4	100	87.727	Macaca_fascicularis
ENSCLAG00000013162	POP4	100	86.425	ENSMMUG00000017424	POP4	100	85.520	Macaca_mulatta
ENSCLAG00000013162	POP4	100	86.425	ENSMNEG00000031374	POP4	100	85.520	Macaca_nemestrina
ENSCLAG00000013162	POP4	100	87.273	ENSMLEG00000043454	POP4	100	87.273	Mandrillus_leucophaeus
ENSCLAG00000013162	POP4	85	66.489	ENSMAMG00000011716	pop4	99	59.910	Mastacembelus_armatus
ENSCLAG00000013162	POP4	89	63.452	ENSMZEG00005002360	pop4	88	62.564	Maylandia_zebra
ENSCLAG00000013162	POP4	99	67.431	ENSMGAG00000005337	POP4	98	66.667	Meleagris_gallopavo
ENSCLAG00000013162	POP4	100	85.455	ENSMAUG00000020110	Pop4	100	85.455	Mesocricetus_auratus
ENSCLAG00000013162	POP4	100	84.091	ENSMICG00000035730	POP4	99	84.091	Microcebus_murinus
ENSCLAG00000013162	POP4	99	58.257	ENSMMOG00000015321	pop4	99	58.257	Mola_mola
ENSCLAG00000013162	POP4	98	77.315	ENSMODG00000029406	POP4	94	77.315	Monodelphis_domestica
ENSCLAG00000013162	POP4	95	62.381	ENSMALG00000012571	pop4	94	62.802	Monopterus_albus
ENSCLAG00000013162	POP4	100	83.710	MGP_CAROLIEiJ_G0029600	Pop4	100	84.615	Mus_caroli
ENSCLAG00000013162	POP4	100	84.163	ENSMUSG00000030423	Pop4	100	83.710	Mus_musculus
ENSCLAG00000013162	POP4	100	84.091	MGP_SPRETEiJ_G0030699	Pop4	100	83.182	Mus_spretus
ENSCLAG00000013162	POP4	100	87.727	ENSMPUG00000008041	-	100	87.727	Mustela_putorius_furo
ENSCLAG00000013162	POP4	100	74.208	ENSMPUG00000008063	-	100	74.208	Mustela_putorius_furo
ENSCLAG00000013162	POP4	99	68.493	ENSMLUG00000010774	POP4	99	68.493	Myotis_lucifugus
ENSCLAG00000013162	POP4	57	84.000	ENSMEUG00000003636	-	100	84.000	Notamacropus_eugenii
ENSCLAG00000013162	POP4	91	91.500	ENSOPRG00000004736	POP4	100	91.500	Ochotona_princeps
ENSCLAG00000013162	POP4	99	97.696	ENSODEG00000013025	POP4	100	98.113	Octodon_degus
ENSCLAG00000013162	POP4	89	62.051	ENSONIG00000003458	pop4	87	62.051	Oreochromis_niloticus
ENSCLAG00000013162	POP4	100	89.091	ENSOCUG00000015974	POP4	100	89.091	Oryctolagus_cuniculus
ENSCLAG00000013162	POP4	90	61.765	ENSORLG00000020317	pop4	92	61.275	Oryzias_latipes
ENSCLAG00000013162	POP4	94	60.096	ENSORLG00015011624	pop4	93	59.615	Oryzias_latipes_hsok
ENSCLAG00000013162	POP4	90	63.317	ENSOMEG00000002538	pop4	89	62.814	Oryzias_melastigma
ENSCLAG00000013162	POP4	100	89.091	ENSOGAG00000011168	POP4	100	89.091	Otolemur_garnettii
ENSCLAG00000013162	POP4	100	89.140	ENSOARG00000004041	POP4	100	89.140	Ovis_aries
ENSCLAG00000013162	POP4	100	87.727	ENSPPAG00000040372	POP4	100	87.727	Pan_paniscus
ENSCLAG00000013162	POP4	100	86.818	ENSPPRG00000010502	POP4	100	86.818	Panthera_pardus
ENSCLAG00000013162	POP4	100	86.818	ENSPTIG00000016598	POP4	100	86.818	Panthera_tigris_altaica
ENSCLAG00000013162	POP4	100	87.727	ENSPTRG00000010779	POP4	100	87.727	Pan_troglodytes
ENSCLAG00000013162	POP4	100	87.727	ENSPANG00000008546	POP4	100	87.727	Papio_anubis
ENSCLAG00000013162	POP4	89	69.500	ENSPKIG00000004468	pop4	87	69.192	Paramormyrops_kingsleyae
ENSCLAG00000013162	POP4	99	72.477	ENSPSIG00000015690	POP4	98	75.758	Pelodiscus_sinensis
ENSCLAG00000013162	POP4	90	57.635	ENSPMGG00000008608	pop4	97	57.143	Periophthalmus_magnuspinnatus
ENSCLAG00000013162	POP4	99	70.183	ENSPEMG00000019982	-	100	70.183	Peromyscus_maniculatus_bairdii
ENSCLAG00000013162	POP4	100	84.091	ENSPEMG00000014034	-	96	84.091	Peromyscus_maniculatus_bairdii
ENSCLAG00000013162	POP4	83	56.566	ENSPMAG00000006265	pop4	100	54.545	Petromyzon_marinus
ENSCLAG00000013162	POP4	100	76.818	ENSPCIG00000024738	POP4	95	76.818	Phascolarctos_cinereus
ENSCLAG00000013162	POP4	98	55.963	ENSPFOG00000000925	pop4	98	55.300	Poecilia_formosa
ENSCLAG00000013162	POP4	92	58.852	ENSPLAG00000003161	pop4	94	58.173	Poecilia_latipinna
ENSCLAG00000013162	POP4	98	55.963	ENSPMEG00000002475	pop4	98	55.300	Poecilia_mexicana
ENSCLAG00000013162	POP4	92	59.314	ENSPREG00000022403	pop4	88	58.128	Poecilia_reticulata
ENSCLAG00000013162	POP4	100	88.182	ENSPPYG00000009805	POP4	100	88.182	Pongo_abelii
ENSCLAG00000013162	POP4	99	79.817	ENSPCAG00000007737	POP4	99	79.817	Procavia_capensis
ENSCLAG00000013162	POP4	100	88.182	ENSPCOG00000018055	POP4	100	88.182	Propithecus_coquereli
ENSCLAG00000013162	POP4	100	84.545	ENSPVAG00000006069	POP4	100	84.545	Pteropus_vampyrus
ENSCLAG00000013162	POP4	89	62.944	ENSPNYG00000020038	pop4	88	62.051	Pundamilia_nyererei
ENSCLAG00000013162	POP4	100	61.364	ENSPNAG00000005591	pop4	100	61.364	Pygocentrus_nattereri
ENSCLAG00000013162	POP4	100	84.163	ENSRNOG00000027646	Pop4	100	85.068	Rattus_norvegicus
ENSCLAG00000013162	POP4	80	84.746	ENSRBIG00000044769	POP4	89	89.130	Rhinopithecus_bieti
ENSCLAG00000013162	POP4	100	87.273	ENSRROG00000028903	POP4	100	87.273	Rhinopithecus_roxellana
ENSCLAG00000013162	POP4	57	35.252	YBR257W	-	50	35.252	Saccharomyces_cerevisiae
ENSCLAG00000013162	POP4	100	86.364	ENSSBOG00000032445	POP4	100	86.364	Saimiri_boliviensis_boliviensis
ENSCLAG00000013162	POP4	99	76.606	ENSSHAG00000016888	POP4	99	76.606	Sarcophilus_harrisii
ENSCLAG00000013162	POP4	92	66.832	ENSSFOG00015014556	pop4	90	65.347	Scleropages_formosus
ENSCLAG00000013162	POP4	93	63.033	ENSSMAG00000016611	pop4	99	62.085	Scophthalmus_maximus
ENSCLAG00000013162	POP4	94	60.766	ENSSDUG00000019865	pop4	84	60.096	Seriola_dumerili
ENSCLAG00000013162	POP4	96	60.748	ENSSLDG00000001763	pop4	93	60.096	Seriola_lalandi_dorsalis
ENSCLAG00000013162	POP4	99	85.714	ENSSARG00000004748	POP4	100	85.714	Sorex_araneus
ENSCLAG00000013162	POP4	99	60.455	ENSSPAG00000014364	pop4	91	63.235	Stegastes_partitus
ENSCLAG00000013162	POP4	100	87.727	ENSSSCG00000002854	POP4	100	87.727	Sus_scrofa
ENSCLAG00000013162	POP4	90	72.727	ENSTGUG00000008953	POP4	99	72.727	Taeniopygia_guttata
ENSCLAG00000013162	POP4	92	59.113	ENSTNIG00000006401	pop4	100	59.113	Tetraodon_nigroviridis
ENSCLAG00000013162	POP4	100	87.330	ENSTBEG00000002194	POP4	100	89.593	Tupaia_belangeri
ENSCLAG00000013162	POP4	100	85.000	ENSTTRG00000005882	POP4	100	85.000	Tursiops_truncatus
ENSCLAG00000013162	POP4	100	86.364	ENSUAMG00000003049	-	100	86.364	Ursus_americanus
ENSCLAG00000013162	POP4	100	86.364	ENSUMAG00000007522	-	100	86.364	Ursus_maritimus
ENSCLAG00000013162	POP4	92	88.119	ENSVVUG00000016876	-	71	88.119	Vulpes_vulpes
ENSCLAG00000013162	POP4	100	67.727	ENSXETG00000017598	pop4	100	67.727	Xenopus_tropicalis
ENSCLAG00000013162	POP4	92	59.709	ENSXCOG00000017695	pop4	88	58.537	Xiphophorus_couchianus
ENSCLAG00000013162	POP4	92	59.709	ENSXMAG00000013862	pop4	88	58.537	Xiphophorus_maculatus