EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000013252 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 815 bases
Position: chrJH721874.1:221104-221918
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000019335	Brix	PF04427.18	5.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000019524	-	681	-	ENSCLAP00000019335	226 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000013252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013252's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000013252	-	100	63.177	ENSCLAG00000010874	-	93	62.455
ENSCLAG00000013252	-	100	71.429	ENSCLAG00000010393	-	89	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013252	-	100	69.231	ENSG00000197498	RPF2	97	64.423	Homo_sapiens
ENSCLAG00000013252	-	96	57.197	ENSAPOG00000005714	rpf2	86	57.197	Acanthochromis_polyacanthus
ENSCLAG00000013252	-	100	68.864	ENSAMEG00000015753	RPF2	89	68.864	Ailuropoda_melanoleuca
ENSCLAG00000013252	-	69	64.516	ENSACIG00000006659	rpf2	93	64.516	Amphilophus_citrinellus
ENSCLAG00000013252	-	96	56.818	ENSAOCG00000005173	rpf2	86	56.818	Amphiprion_ocellaris
ENSCLAG00000013252	-	96	57.088	ENSAPEG00000004003	rpf2	86	57.088	Amphiprion_percula
ENSCLAG00000013252	-	99	53.506	ENSATEG00000012818	rpf2	88	53.506	Anabas_testudineus
ENSCLAG00000013252	-	86	59.583	ENSAPLG00000008812	RPF2	88	59.583	Anas_platyrhynchos
ENSCLAG00000013252	-	99	58.148	ENSACAG00000011270	RPF2	87	58.148	Anolis_carolinensis
ENSCLAG00000013252	-	100	64.469	ENSANAG00000034834	-	89	64.469	Aotus_nancymaae
ENSCLAG00000013252	-	100	55.678	ENSANAG00000033736	-	88	56.777	Aotus_nancymaae
ENSCLAG00000013252	-	99	51.711	ENSANAG00000021067	-	86	50.951	Aotus_nancymaae
ENSCLAG00000013252	-	98	63.265	ENSANAG00000025459	-	91	60.816	Aotus_nancymaae
ENSCLAG00000013252	-	100	71.863	ENSANAG00000026549	-	89	71.863	Aotus_nancymaae
ENSCLAG00000013252	-	96	50.763	ENSAMXG00000035201	rpf2	85	50.763	Astyanax_mexicanus
ENSCLAG00000013252	-	100	70.037	ENSBTAG00000016584	RPF2	89	70.037	Bos_taurus
ENSCLAG00000013252	-	74	38.462	WBGene00021830	Y54E10A.10	57	38.462	Caenorhabditis_elegans
ENSCLAG00000013252	-	100	73.640	ENSCJAG00000038330	RPF2	100	71.605	Callithrix_jacchus
ENSCLAG00000013252	-	100	68.132	ENSCAFG00000003918	RPF2	89	68.132	Canis_familiaris
ENSCLAG00000013252	-	100	70.342	ENSCHIG00000022499	RPF2	89	70.342	Capra_hircus
ENSCLAG00000013252	-	100	67.033	ENSTSYG00000013924	RPF2	89	67.033	Carlito_syrichta
ENSCLAG00000013252	-	100	63.137	ENSCAPG00000014257	RPF2	88	62.353	Cavia_aperea
ENSCLAG00000013252	-	100	71.429	ENSCPOG00000006797	RPF2	89	71.429	Cavia_porcellus
ENSCLAG00000013252	-	99	56.818	ENSCCAG00000028906	-	87	56.931	Cebus_capucinus
ENSCLAG00000013252	-	98	43.678	ENSCCAG00000028553	-	86	50.958	Cebus_capucinus
ENSCLAG00000013252	-	100	69.963	ENSCCAG00000030864	-	89	69.963	Cebus_capucinus
ENSCLAG00000013252	-	100	67.766	ENSCCAG00000030365	-	89	67.766	Cebus_capucinus
ENSCLAG00000013252	-	83	54.894	ENSCATG00000029725	-	87	54.468	Cercocebus_atys
ENSCLAG00000013252	-	100	50.183	ENSCATG00000034352	-	87	50.183	Cercocebus_atys
ENSCLAG00000013252	-	99	67.279	ENSCHOG00000005865	RPF2	89	67.279	Choloepus_hoffmanni
ENSCLAG00000013252	-	96	62.121	ENSCPBG00000006504	RPF2	86	62.121	Chrysemys_picta_bellii
ENSCLAG00000013252	-	92	42.745	ENSCING00000008090	-	83	42.745	Ciona_intestinalis
ENSCLAG00000013252	-	94	43.580	ENSCSAVG00000010672	-	87	43.580	Ciona_savignyi
ENSCLAG00000013252	-	100	69.597	ENSCANG00000030665	RPF2	89	69.597	Colobus_angolensis_palliatus
ENSCLAG00000013252	-	100	67.033	ENSCGRG00001007331	-	89	67.033	Cricetulus_griseus_chok1gshd
ENSCLAG00000013252	-	96	53.435	ENSCGRG00001005262	-	83	53.435	Cricetulus_griseus_chok1gshd
ENSCLAG00000013252	-	100	67.033	ENSCGRG00000006083	Rpf2	89	67.033	Cricetulus_griseus_crigri
ENSCLAG00000013252	-	99	51.301	ENSCSEG00000015725	rpf2	89	51.685	Cynoglossus_semilaevis
ENSCLAG00000013252	-	96	55.042	ENSCVAG00000001072	rpf2	87	54.545	Cyprinodon_variegatus
ENSCLAG00000013252	-	98	50.562	ENSDARG00000043960	rpf2	86	50.562	Danio_rerio
ENSCLAG00000013252	-	81	83.152	ENSDNOG00000039270	RPF2	89	83.152	Dasypus_novemcinctus
ENSCLAG00000013252	-	79	53.403	ENSDORG00000026915	Rpf2	81	53.403	Dipodomys_ordii
ENSCLAG00000013252	-	85	35.683	FBgn0038585	Non3	71	35.683	Drosophila_melanogaster
ENSCLAG00000013252	-	92	36.759	ENSEBUG00000003640	rpf2	67	40.271	Eptatretus_burgeri
ENSCLAG00000013252	-	96	70.115	ENSEASG00005006927	-	89	68.889	Equus_asinus_asinus
ENSCLAG00000013252	-	67	75.163	ENSEASG00005002363	-	99	75.163	Equus_asinus_asinus
ENSCLAG00000013252	-	96	70.498	ENSECAG00000017121	RPF2	89	69.259	Equus_caballus
ENSCLAG00000013252	-	100	62.637	ENSEEUG00000006169	RPF2	92	62.637	Erinaceus_europaeus
ENSCLAG00000013252	-	92	55.118	ENSELUG00000018518	rpf2	84	55.118	Esox_lucius
ENSCLAG00000013252	-	100	68.864	ENSFCAG00000001527	RPF2	89	68.864	Felis_catus
ENSCLAG00000013252	-	96	64.122	ENSFALG00000010816	RPF2	86	64.122	Ficedula_albicollis
ENSCLAG00000013252	-	100	70.330	ENSFDAG00000005811	-	89	70.330	Fukomys_damarensis
ENSCLAG00000013252	-	85	59.556	ENSFDAG00000016721	-	87	59.556	Fukomys_damarensis
ENSCLAG00000013252	-	96	55.682	ENSFHEG00000011243	rpf2	86	55.682	Fundulus_heteroclitus
ENSCLAG00000013252	-	75	60.920	ENSGMOG00000002521	rpf2	59	59.322	Gadus_morhua
ENSCLAG00000013252	-	96	62.595	ENSGALG00000037087	RPF2	86	62.595	Gallus_gallus
ENSCLAG00000013252	-	96	55.985	ENSGAFG00000009537	rpf2	87	55.303	Gambusia_affinis
ENSCLAG00000013252	-	96	54.924	ENSGACG00000006507	rpf2	86	54.924	Gasterosteus_aculeatus
ENSCLAG00000013252	-	96	63.137	ENSGAGG00000016221	RPF2	86	63.137	Gopherus_agassizii
ENSCLAG00000013252	-	92	61.265	ENSGGOG00000024187	-	88	61.265	Gorilla_gorilla
ENSCLAG00000013252	-	100	54.579	ENSGGOG00000001469	RPF2	87	54.212	Gorilla_gorilla
ENSCLAG00000013252	-	96	54.167	ENSHBUG00000021805	rpf2	86	54.167	Haplochromis_burtoni
ENSCLAG00000013252	-	100	70.330	ENSHGLG00000001322	RPF2	89	70.330	Heterocephalus_glaber_female
ENSCLAG00000013252	-	92	65.882	ENSHGLG00000012697	-	88	65.882	Heterocephalus_glaber_female
ENSCLAG00000013252	-	98	66.538	ENSHGLG00000012500	-	70	67.692	Heterocephalus_glaber_female
ENSCLAG00000013252	-	92	65.882	ENSHGLG00100000462	-	88	65.882	Heterocephalus_glaber_male
ENSCLAG00000013252	-	99	55.926	ENSHGLG00100009310	-	100	57.037	Heterocephalus_glaber_male
ENSCLAG00000013252	-	100	70.330	ENSHGLG00100012131	RPF2	89	70.330	Heterocephalus_glaber_male
ENSCLAG00000013252	-	98	66.795	ENSHGLG00100012473	-	86	67.954	Heterocephalus_glaber_male
ENSCLAG00000013252	-	92	66.816	ENSHGLG00100002981	-	87	66.816	Heterocephalus_glaber_male
ENSCLAG00000013252	-	99	55.094	ENSHCOG00000000225	rpf2	88	55.344	Hippocampus_comes
ENSCLAG00000013252	-	96	45.283	ENSIPUG00000016288	rpf2	86	44.906	Ictalurus_punctatus
ENSCLAG00000013252	-	99	62.083	ENSSTOG00000013114	RPF2	86	62.083	Ictidomys_tridecemlineatus
ENSCLAG00000013252	-	100	66.923	ENSJJAG00000009092	Rpf2	89	66.923	Jaculus_jaculus
ENSCLAG00000013252	-	99	54.982	ENSKMAG00000014609	rpf2	88	54.982	Kryptolebias_marmoratus
ENSCLAG00000013252	-	96	56.439	ENSLBEG00000011907	rpf2	84	53.968	Labrus_bergylta
ENSCLAG00000013252	-	97	58.052	ENSLACG00000003942	RPF2	86	58.052	Latimeria_chalumnae
ENSCLAG00000013252	-	92	54.864	ENSLOCG00000016992	rpf2	83	54.864	Lepisosteus_oculatus
ENSCLAG00000013252	-	100	68.613	ENSLAFG00000018219	RPF2	89	68.613	Loxodonta_africana
ENSCLAG00000013252	-	100	69.597	ENSMFAG00000000417	RPF2	100	82.424	Macaca_fascicularis
ENSCLAG00000013252	-	83	53.814	ENSMFAG00000036119	-	87	53.814	Macaca_fascicularis
ENSCLAG00000013252	-	99	55.882	ENSMMUG00000042376	-	89	55.882	Macaca_mulatta
ENSCLAG00000013252	-	100	69.597	ENSMMUG00000021532	RPF2	97	64.904	Macaca_mulatta
ENSCLAG00000013252	-	100	54.945	ENSMNEG00000031683	RPF2	87	54.579	Macaca_nemestrina
ENSCLAG00000013252	-	62	82.270	ENSMLEG00000012574	-	92	82.270	Mandrillus_leucophaeus
ENSCLAG00000013252	-	99	57.303	ENSMLEG00000042472	-	88	57.303	Mandrillus_leucophaeus
ENSCLAG00000013252	-	96	52.652	ENSMAMG00000004267	rpf2	86	52.652	Mastacembelus_armatus
ENSCLAG00000013252	-	96	54.167	ENSMZEG00005015632	rpf2	86	54.167	Maylandia_zebra
ENSCLAG00000013252	-	96	62.595	ENSMGAG00000013429	RPF2	86	62.595	Meleagris_gallopavo
ENSCLAG00000013252	-	79	66.480	ENSMAUG00000005049	Rpf2	86	66.480	Mesocricetus_auratus
ENSCLAG00000013252	-	96	68.421	ENSMICG00000038169	-	88	68.110	Microcebus_murinus
ENSCLAG00000013252	-	100	68.132	ENSMICG00000032086	-	100	80.606	Microcebus_murinus
ENSCLAG00000013252	-	99	53.731	ENSMICG00000028979	-	88	52.941	Microcebus_murinus
ENSCLAG00000013252	-	100	67.399	ENSMOCG00000005634	Rpf2	89	67.399	Microtus_ochrogaster
ENSCLAG00000013252	-	96	55.642	ENSMMOG00000014844	rpf2	87	55.642	Mola_mola
ENSCLAG00000013252	-	99	65.314	ENSMODG00000017919	RPF2	89	65.314	Monodelphis_domestica
ENSCLAG00000013252	-	96	54.167	ENSMALG00000019046	rpf2	86	54.167	Monopterus_albus
ENSCLAG00000013252	-	100	67.399	MGP_CAROLIEiJ_G0015254	Rpf2	89	67.399	Mus_caroli
ENSCLAG00000013252	-	100	66.667	ENSMUSG00000038510	Rpf2	100	66.667	Mus_musculus
ENSCLAG00000013252	-	100	66.667	MGP_PahariEiJ_G0030671	Rpf2	100	66.667	Mus_pahari
ENSCLAG00000013252	-	100	66.300	MGP_SPRETEiJ_G0016063	Rpf2	99	66.300	Mus_spretus
ENSCLAG00000013252	-	100	70.330	ENSMPUG00000010183	RPF2	78	70.330	Mustela_putorius_furo
ENSCLAG00000013252	-	91	72.614	ENSMLUG00000005676	RPF2	95	72.614	Myotis_lucifugus
ENSCLAG00000013252	-	100	68.132	ENSNGAG00000009701	Rpf2	89	68.132	Nannospalax_galili
ENSCLAG00000013252	-	96	54.545	ENSNBRG00000011087	rpf2	86	54.545	Neolamprologus_brichardi
ENSCLAG00000013252	-	74	63.551	ENSNLEG00000011848	-	86	62.981	Nomascus_leucogenys
ENSCLAG00000013252	-	100	68.864	ENSNLEG00000027819	RPF2	89	68.864	Nomascus_leucogenys
ENSCLAG00000013252	-	97	59.623	ENSNLEG00000033597	-	84	59.623	Nomascus_leucogenys
ENSCLAG00000013252	-	100	52.015	ENSMEUG00000006421	RPF2	92	52.015	Notamacropus_eugenii
ENSCLAG00000013252	-	95	66.412	ENSODEG00000006584	-	90	66.412	Octodon_degus
ENSCLAG00000013252	-	100	56.410	ENSODEG00000002442	-	88	56.410	Octodon_degus
ENSCLAG00000013252	-	91	65.948	ENSODEG00000003531	-	91	65.948	Octodon_degus
ENSCLAG00000013252	-	100	72.161	ENSODEG00000013529	-	89	72.161	Octodon_degus
ENSCLAG00000013252	-	100	60.769	ENSODEG00000006939	-	91	60.769	Octodon_degus
ENSCLAG00000013252	-	100	69.231	ENSODEG00000019144	-	89	69.231	Octodon_degus
ENSCLAG00000013252	-	96	53.788	ENSONIG00000011383	rpf2	86	53.788	Oreochromis_niloticus
ENSCLAG00000013252	-	100	69.231	ENSOCUG00000016028	RPF2	89	69.231	Oryctolagus_cuniculus
ENSCLAG00000013252	-	96	55.682	ENSORLG00000015183	rpf2	86	55.682	Oryzias_latipes
ENSCLAG00000013252	-	96	56.202	ENSORLG00020008756	rpf2	85	56.202	Oryzias_latipes_hni
ENSCLAG00000013252	-	96	56.589	ENSORLG00015003841	RPF2	86	55.682	Oryzias_latipes_hsok
ENSCLAG00000013252	-	98	55.431	ENSOMEG00000011508	rpf2	86	55.639	Oryzias_melastigma
ENSCLAG00000013252	-	100	68.132	ENSOGAG00000007438	RPF2	89	68.132	Otolemur_garnettii
ENSCLAG00000013252	-	100	68.864	ENSOARG00000015548	-	89	68.864	Ovis_aries
ENSCLAG00000013252	-	100	68.864	ENSOARG00000009886	-	89	68.864	Ovis_aries
ENSCLAG00000013252	-	100	69.231	ENSPPAG00000035622	RPF2	89	69.231	Pan_paniscus
ENSCLAG00000013252	-	88	60.976	ENSPPAG00000032089	-	88	60.976	Pan_paniscus
ENSCLAG00000013252	-	100	63.707	ENSPPRG00000008363	-	90	63.707	Panthera_pardus
ENSCLAG00000013252	-	100	69.231	ENSPPRG00000000320	-	89	69.231	Panthera_pardus
ENSCLAG00000013252	-	100	69.231	ENSPTIG00000002060	RPF2	89	69.231	Panthera_tigris_altaica
ENSCLAG00000013252	-	100	69.231	ENSPTRG00000018503	RPF2	89	69.231	Pan_troglodytes
ENSCLAG00000013252	-	100	69.597	ENSPANG00000018834	RPF2	89	69.597	Papio_anubis
ENSCLAG00000013252	-	93	52.140	ENSPKIG00000019506	rpf2	84	52.140	Paramormyrops_kingsleyae
ENSCLAG00000013252	-	96	60.985	ENSPSIG00000014887	RPF2	86	60.985	Pelodiscus_sinensis
ENSCLAG00000013252	-	90	64.286	ENSPEMG00000011413	Rpf2	84	67.539	Peromyscus_maniculatus_bairdii
ENSCLAG00000013252	-	96	65.530	ENSPCIG00000028172	RPF2	87	64.945	Phascolarctos_cinereus
ENSCLAG00000013252	-	96	56.061	ENSPFOG00000003396	rpf2	87	56.061	Poecilia_formosa
ENSCLAG00000013252	-	96	55.682	ENSPLAG00000001226	rpf2	87	55.682	Poecilia_latipinna
ENSCLAG00000013252	-	96	56.061	ENSPMEG00000007781	rpf2	87	56.061	Poecilia_mexicana
ENSCLAG00000013252	-	96	55.303	ENSPREG00000020525	rpf2	87	55.303	Poecilia_reticulata
ENSCLAG00000013252	-	100	69.231	ENSPPYG00000016925	RPF2	89	69.231	Pongo_abelii
ENSCLAG00000013252	-	65	67.033	ENSPCAG00000002562	RPF2	72	66.102	Procavia_capensis
ENSCLAG00000013252	-	100	59.328	ENSPCOG00000012785	RPF2	88	59.701	Propithecus_coquereli
ENSCLAG00000013252	-	88	72.414	ENSPVAG00000003446	RPF2	78	72.385	Pteropus_vampyrus
ENSCLAG00000013252	-	97	52.308	ENSPNAG00000000082	rpf2	87	51.504	Pygocentrus_nattereri
ENSCLAG00000013252	-	99	67.159	ENSRNOG00000000587	Rpf2	89	67.159	Rattus_norvegicus
ENSCLAG00000013252	-	96	68.340	ENSRBIG00000038389	RPF2	100	81.212	Rhinopithecus_bieti
ENSCLAG00000013252	-	100	69.118	ENSRROG00000036457	RPF2	89	69.118	Rhinopithecus_roxellana
ENSCLAG00000013252	-	75	62.963	ENSRROG00000036685	-	79	62.981	Rhinopithecus_roxellana
ENSCLAG00000013252	-	83	62.821	ENSRROG00000039510	-	87	62.821	Rhinopithecus_roxellana
ENSCLAG00000013252	-	96	58.077	ENSRROG00000028992	-	87	58.077	Rhinopithecus_roxellana
ENSCLAG00000013252	-	83	37.021	YKR081C	-	68	37.021	Saccharomyces_cerevisiae
ENSCLAG00000013252	-	74	48.293	ENSSBOG00000029182	-	76	48.241	Saimiri_boliviensis_boliviensis
ENSCLAG00000013252	-	100	55.172	ENSSBOG00000034420	-	87	52.874	Saimiri_boliviensis_boliviensis
ENSCLAG00000013252	-	98	59.055	ENSSBOG00000025434	-	92	56.693	Saimiri_boliviensis_boliviensis
ENSCLAG00000013252	-	62	81.560	ENSSBOG00000003975	-	96	79.861	Saimiri_boliviensis_boliviensis
ENSCLAG00000013252	-	98	61.364	ENSSBOG00000022486	-	92	61.364	Saimiri_boliviensis_boliviensis
ENSCLAG00000013252	-	77	46.575	ENSSBOG00000030264	-	74	45.673	Saimiri_boliviensis_boliviensis
ENSCLAG00000013252	-	99	64.576	ENSSHAG00000002212	RPF2	88	64.576	Sarcophilus_harrisii
ENSCLAG00000013252	-	98	53.435	ENSSFOG00015020916	rpf2	87	53.435	Scleropages_formosus
ENSCLAG00000013252	-	92	56.299	ENSSMAG00000017499	rpf2	82	56.299	Scophthalmus_maximus
ENSCLAG00000013252	-	96	56.078	ENSSDUG00000010383	rpf2	84	56.078	Seriola_dumerili
ENSCLAG00000013252	-	96	54.924	ENSSLDG00000022111	rpf2	86	54.924	Seriola_lalandi_dorsalis
ENSCLAG00000013252	-	82	65.591	ENSSARG00000012063	RPF2	61	65.591	Sorex_araneus
ENSCLAG00000013252	-	96	62.403	ENSSPUG00000005108	RPF2	85	62.403	Sphenodon_punctatus
ENSCLAG00000013252	-	96	57.197	ENSSPAG00000008035	rpf2	86	57.197	Stegastes_partitus
ENSCLAG00000013252	-	100	69.597	ENSSSCG00000004394	RPF2	89	69.597	Sus_scrofa
ENSCLAG00000013252	-	96	63.740	ENSTGUG00000012034	RPF2	86	63.740	Taeniopygia_guttata
ENSCLAG00000013252	-	96	54.167	ENSTRUG00000018264	rpf2	86	54.167	Takifugu_rubripes
ENSCLAG00000013252	-	96	51.894	ENSTNIG00000002749	rpf2	85	51.894	Tetraodon_nigroviridis
ENSCLAG00000013252	-	82	80.108	ENSTBEG00000017151	RPF2	61	80.108	Tupaia_belangeri
ENSCLAG00000013252	-	100	68.132	ENSTTRG00000012357	RPF2	89	68.132	Tursiops_truncatus
ENSCLAG00000013252	-	100	69.963	ENSUAMG00000013497	RPF2	89	69.963	Ursus_americanus
ENSCLAG00000013252	-	100	69.597	ENSUMAG00000025488	RPF2	89	69.597	Ursus_maritimus
ENSCLAG00000013252	-	100	69.118	ENSVPAG00000009562	RPF2	89	69.118	Vicugna_pacos
ENSCLAG00000013252	-	100	64.368	ENSVVUG00000021231	-	96	64.368	Vulpes_vulpes
ENSCLAG00000013252	-	100	66.284	ENSVVUG00000006593	-	88	66.284	Vulpes_vulpes
ENSCLAG00000013252	-	100	56.727	ENSXETG00000021335	rpf2	89	56.727	Xenopus_tropicalis
ENSCLAG00000013252	-	96	56.589	ENSXCOG00000001590	rpf2	86	56.589	Xiphophorus_couchianus
ENSCLAG00000013252	-	96	55.417	ENSXMAG00000021706	rpf2	85	53.175	Xiphophorus_maculatus