EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000013266 (Gene tree)
Gene ID: 102003229
Gene Symbol: -
Alias: C20orf6|bA526K24.1
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 65351 bases
Position: chrJH721875.1:23155677-23221027
Accession: 102003229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000019354	NUC153	PF08159.12	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000019543	-	3971	XM_005380886	ENSCLAP00000019354	832 (aa)	XP_005380943	UPI00038F0A8F

Gene Model

Click here to download ENSCLAG00000013266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013266	-	100	82.532	ENSG00000089048	ESF1	99	84.513	Homo_sapiens
ENSCLAG00000013266	-	60	54.064	ENSAPOG00000003004	esf1	99	53.585	Acanthochromis_polyacanthus
ENSCLAG00000013266	-	100	80.117	ENSAMEG00000008830	ESF1	100	79.532	Ailuropoda_melanoleuca
ENSCLAG00000013266	-	77	72.000	ENSACIG00000018305	esf1	95	72.222	Amphilophus_citrinellus
ENSCLAG00000013266	-	76	75.325	ENSAOCG00000006033	esf1	88	75.000	Amphiprion_ocellaris
ENSCLAG00000013266	-	76	75.325	ENSAPEG00000022385	esf1	88	75.000	Amphiprion_percula
ENSCLAG00000013266	-	78	74.324	ENSATEG00000016321	esf1	85	75.000	Anabas_testudineus
ENSCLAG00000013266	-	66	73.694	ENSAPLG00000012113	ESF1	66	73.827	Anas_platyrhynchos
ENSCLAG00000013266	-	100	62.369	ENSACAG00000000963	ESF1	100	62.791	Anolis_carolinensis
ENSCLAG00000013266	-	100	82.706	ENSANAG00000036778	ESF1	100	82.706	Aotus_nancymaae
ENSCLAG00000013266	-	77	71.429	ENSACLG00000002972	esf1	92	70.833	Astatotilapia_calliptera
ENSCLAG00000013266	-	76	62.821	ENSAMXG00000001172	esf1	96	63.251	Astyanax_mexicanus
ENSCLAG00000013266	-	100	80.093	ENSBTAG00000007130	ESF1	100	79.977	Bos_taurus
ENSCLAG00000013266	-	100	82.388	ENSCJAG00000004640	ESF1	100	82.861	Callithrix_jacchus
ENSCLAG00000013266	-	100	81.316	ENSCAFG00000005587	ESF1	100	80.729	Canis_familiaris
ENSCLAG00000013266	-	100	81.316	ENSCAFG00020027530	ESF1	100	80.729	Canis_lupus_dingo
ENSCLAG00000013266	-	100	82.437	ENSCHIG00000021188	ESF1	100	82.079	Capra_hircus
ENSCLAG00000013266	-	100	83.077	ENSTSYG00000009956	ESF1	100	83.550	Carlito_syrichta
ENSCLAG00000013266	-	81	92.742	ENSCAPG00000010333	-	96	93.548	Cavia_aperea
ENSCLAG00000013266	-	100	74.399	ENSCAPG00000010466	-	100	73.317	Cavia_aperea
ENSCLAG00000013266	-	100	88.969	ENSCPOG00000014027	-	100	88.969	Cavia_porcellus
ENSCLAG00000013266	-	100	82.665	ENSCCAG00000024521	ESF1	100	83.137	Cebus_capucinus
ENSCLAG00000013266	-	100	82.864	ENSCATG00000042792	ESF1	100	83.451	Cercocebus_atys
ENSCLAG00000013266	-	100	82.901	ENSCSAG00000011777	ESF1	100	83.765	Chlorocebus_sabaeus
ENSCLAG00000013266	-	100	83.138	ENSCANG00000030674	ESF1	100	84.075	Colobus_angolensis_palliatus
ENSCLAG00000013266	-	100	81.623	ENSCGRG00001018257	Esf1	100	81.862	Cricetulus_griseus_chok1gshd
ENSCLAG00000013266	-	74	64.615	ENSCSEG00000001159	esf1	91	65.079	Cynoglossus_semilaevis
ENSCLAG00000013266	-	74	73.846	ENSCVAG00000007894	esf1	90	74.603	Cyprinodon_variegatus
ENSCLAG00000013266	-	75	67.568	ENSDARG00000008740	esf1	86	68.056	Danio_rerio
ENSCLAG00000013266	-	100	79.763	ENSDNOG00000019409	ESF1	100	80.710	Dasypus_novemcinctus
ENSCLAG00000013266	-	100	83.513	ENSDORG00000016313	Esf1	100	84.110	Dipodomys_ordii
ENSCLAG00000013266	-	76	50.588	FBgn0024364	CG11417	86	55.714	Drosophila_melanogaster
ENSCLAG00000013266	-	82	82.303	ENSETEG00000004471	ESF1	80	82.303	Echinops_telfairi
ENSCLAG00000013266	-	67	50.255	ENSEBUG00000015161	esf1	99	44.332	Eptatretus_burgeri
ENSCLAG00000013266	-	100	81.861	ENSEASG00005001777	ESF1	100	82.332	Equus_asinus_asinus
ENSCLAG00000013266	-	100	81.861	ENSECAG00000019188	ESF1	100	82.332	Equus_caballus
ENSCLAG00000013266	-	73	59.516	ENSEEUG00000015837	-	97	59.677	Erinaceus_europaeus
ENSCLAG00000013266	-	100	81.214	ENSFCAG00000000919	ESF1	100	80.980	Felis_catus
ENSCLAG00000013266	-	66	74.054	ENSFALG00000010914	ESF1	99	62.821	Ficedula_albicollis
ENSCLAG00000013266	-	100	88.249	ENSFDAG00000014777	ESF1	100	88.129	Fukomys_damarensis
ENSCLAG00000013266	-	60	59.406	ENSFHEG00000014984	esf1	99	59.604	Fundulus_heteroclitus
ENSCLAG00000013266	-	100	62.471	ENSGALG00000034768	ESF1	100	61.440	Gallus_gallus
ENSCLAG00000013266	-	76	67.568	ENSGAFG00000000540	esf1	98	68.056	Gambusia_affinis
ENSCLAG00000013266	-	100	82.063	ENSGGOG00000006692	ESF1	100	83.353	Gorilla_gorilla
ENSCLAG00000013266	-	81	72.727	ENSHBUG00000001890	esf1	87	72.222	Haplochromis_burtoni
ENSCLAG00000013266	-	100	89.556	ENSHGLG00000011505	ESF1	100	88.956	Heterocephalus_glaber_female
ENSCLAG00000013266	-	100	89.556	ENSHGLG00100015045	ESF1	100	88.956	Heterocephalus_glaber_male
ENSCLAG00000013266	-	76	69.231	ENSIPUG00000006507	esf1	89	60.577	Ictalurus_punctatus
ENSCLAG00000013266	-	100	84.368	ENSSTOG00000009846	ESF1	100	84.010	Ictidomys_tridecemlineatus
ENSCLAG00000013266	-	100	80.638	ENSJJAG00000012570	Esf1	100	80.992	Jaculus_jaculus
ENSCLAG00000013266	-	66	68.959	ENSLACG00000016439	ESF1	66	68.783	Latimeria_chalumnae
ENSCLAG00000013266	-	100	80.595	ENSLAFG00000005479	ESF1	100	81.071	Loxodonta_africana
ENSCLAG00000013266	-	100	82.981	ENSMFAG00000036841	ESF1	100	83.568	Macaca_fascicularis
ENSCLAG00000013266	-	100	82.981	ENSMNEG00000044042	ESF1	100	83.568	Macaca_nemestrina
ENSCLAG00000013266	-	100	82.746	ENSMLEG00000037121	ESF1	100	83.333	Mandrillus_leucophaeus
ENSCLAG00000013266	-	77	74.324	ENSMAMG00000018648	esf1	88	75.000	Mastacembelus_armatus
ENSCLAG00000013266	-	60	58.300	ENSMZEG00005013912	esf1	99	57.905	Maylandia_zebra
ENSCLAG00000013266	-	100	61.575	ENSMGAG00000004291	ESF1	100	61.092	Meleagris_gallopavo
ENSCLAG00000013266	-	100	82.122	ENSMAUG00000015975	Esf1	100	82.837	Mesocricetus_auratus
ENSCLAG00000013266	-	100	83.765	ENSMICG00000010711	ESF1	100	83.882	Microcebus_murinus
ENSCLAG00000013266	-	100	80.287	ENSMOCG00000005902	Esf1	100	80.526	Microtus_ochrogaster
ENSCLAG00000013266	-	60	58.745	ENSMMOG00000018693	esf1	99	59.885	Mola_mola
ENSCLAG00000013266	-	100	70.714	ENSMODG00000005066	ESF1	100	70.119	Monodelphis_domestica
ENSCLAG00000013266	-	70	70.270	ENSMALG00000007338	esf1	79	70.833	Monopterus_albus
ENSCLAG00000013266	-	100	81.257	MGP_CAROLIEiJ_G0024365	Esf1	100	81.613	Mus_caroli
ENSCLAG00000013266	-	100	80.142	ENSMUSG00000045624	Esf1	100	81.087	Mus_musculus
ENSCLAG00000013266	-	100	81.043	MGP_PahariEiJ_G0025810	Esf1	100	81.280	Mus_pahari
ENSCLAG00000013266	-	100	80.618	MGP_SPRETEiJ_G0025285	Esf1	98	84.564	Mus_spretus
ENSCLAG00000013266	-	100	82.042	ENSMPUG00000001450	ESF1	100	81.904	Mustela_putorius_furo
ENSCLAG00000013266	-	100	80.941	ENSMLUG00000013080	ESF1	100	81.294	Myotis_lucifugus
ENSCLAG00000013266	-	100	80.774	ENSNLEG00000014563	ESF1	100	81.946	Nomascus_leucogenys
ENSCLAG00000013266	-	59	100.000	ENSMEUG00000005061	-	72	59.627	Notamacropus_eugenii
ENSCLAG00000013266	-	61	82.411	ENSOPRG00000004862	ESF1	100	82.411	Ochotona_princeps
ENSCLAG00000013266	-	100	90.048	ENSODEG00000006824	ESF1	100	89.568	Octodon_degus
ENSCLAG00000013266	-	78	72.727	ENSONIG00000006804	esf1	91	72.222	Oreochromis_niloticus
ENSCLAG00000013266	-	66	81.982	ENSOANG00000008432	-	100	70.106	Ornithorhynchus_anatinus
ENSCLAG00000013266	-	100	79.882	ENSOCUG00000005414	ESF1	100	80.355	Oryctolagus_cuniculus
ENSCLAG00000013266	-	60	54.820	ENSORLG00000018625	esf1	99	52.552	Oryzias_latipes
ENSCLAG00000013266	-	76	69.231	ENSORLG00015022826	esf1	91	68.056	Oryzias_latipes_hsok
ENSCLAG00000013266	-	60	54.981	ENSOMEG00000009311	esf1	99	53.232	Oryzias_melastigma
ENSCLAG00000013266	-	100	79.809	ENSOGAG00000016912	ESF1	100	79.570	Otolemur_garnettii
ENSCLAG00000013266	-	100	78.977	ENSOARG00000011158	ESF1	100	78.409	Ovis_aries
ENSCLAG00000013266	-	100	82.881	ENSPPAG00000024379	ESF1	100	83.117	Pan_paniscus
ENSCLAG00000013266	-	100	81.148	ENSPPRG00000012007	ESF1	100	81.265	Panthera_pardus
ENSCLAG00000013266	-	100	81.712	ENSPTIG00000020063	ESF1	100	81.125	Panthera_tigris_altaica
ENSCLAG00000013266	-	100	82.201	ENSPTRG00000013258	ESF1	100	83.021	Pan_troglodytes
ENSCLAG00000013266	-	66	62.738	ENSPKIG00000024448	esf1	95	51.452	Paramormyrops_kingsleyae
ENSCLAG00000013266	-	72	49.758	ENSPMGG00000016911	esf1	72	51.585	Periophthalmus_magnuspinnatus
ENSCLAG00000013266	-	100	70.784	ENSPCIG00000019331	ESF1	100	71.241	Phascolarctos_cinereus
ENSCLAG00000013266	-	78	63.514	ENSPFOG00000010101	esf1	88	65.278	Poecilia_formosa
ENSCLAG00000013266	-	60	59.252	ENSPLAG00000006452	esf1	99	58.268	Poecilia_latipinna
ENSCLAG00000013266	-	77	64.865	ENSPMEG00000000713	esf1	88	65.278	Poecilia_mexicana
ENSCLAG00000013266	-	76	64.865	ENSPREG00000004431	esf1	86	65.278	Poecilia_reticulata
ENSCLAG00000013266	-	100	82.904	ENSPPYG00000010715	ESF1	100	83.607	Pongo_abelii
ENSCLAG00000013266	-	100	73.665	ENSPCAG00000006881	ESF1	100	74.021	Procavia_capensis
ENSCLAG00000013266	-	83	94.444	ENSPVAG00000001295	ESF1	83	94.444	Pteropus_vampyrus
ENSCLAG00000013266	-	81	70.130	ENSPNYG00000015735	esf1	88	70.833	Pundamilia_nyererei
ENSCLAG00000013266	-	75	63.514	ENSPNAG00000014721	esf1	84	63.889	Pygocentrus_nattereri
ENSCLAG00000013266	-	100	79.457	ENSRNOG00000004777	Esf1	100	80.165	Rattus_norvegicus
ENSCLAG00000013266	-	100	83.079	ENSRBIG00000035763	ESF1	100	84.136	Rhinopithecus_bieti
ENSCLAG00000013266	-	100	82.884	ENSRROG00000032022	ESF1	100	84.291	Rhinopithecus_roxellana
ENSCLAG00000013266	-	56	34.122	YDR365C	-	73	34.503	Saccharomyces_cerevisiae
ENSCLAG00000013266	-	100	81.265	ENSSBOG00000030387	ESF1	100	82.160	Saimiri_boliviensis_boliviensis
ENSCLAG00000013266	-	100	70.251	ENSSHAG00000000449	ESF1	100	70.848	Sarcophilus_harrisii
ENSCLAG00000013266	-	77	72.973	ENSSDUG00000019460	esf1	91	73.611	Seriola_dumerili
ENSCLAG00000013266	-	100	62.178	ENSSPUG00000012635	ESF1	100	61.593	Sphenodon_punctatus
ENSCLAG00000013266	-	77	73.077	ENSSPAG00000019077	esf1	87	73.611	Stegastes_partitus
ENSCLAG00000013266	-	100	80.952	ENSSSCG00000007077	ESF1	100	80.952	Sus_scrofa
ENSCLAG00000013266	-	66	72.482	ENSTGUG00000002450	ESF1	64	73.333	Taeniopygia_guttata
ENSCLAG00000013266	-	79	71.014	ENSTRUG00000009445	esf1	87	68.056	Takifugu_rubripes
ENSCLAG00000013266	-	73	86.957	ENSTBEG00000008552	ESF1	74	86.957	Tupaia_belangeri
ENSCLAG00000013266	-	100	79.859	ENSTTRG00000005335	ESF1	100	81.030	Tursiops_truncatus
ENSCLAG00000013266	-	100	81.338	ENSUMAG00000008579	ESF1	100	81.455	Ursus_maritimus
ENSCLAG00000013266	-	100	75.650	ENSVPAG00000005291	ESF1	92	86.420	Vicugna_pacos
ENSCLAG00000013266	-	100	80.259	ENSVVUG00000014318	ESF1	93	80.494	Vulpes_vulpes
ENSCLAG00000013266	-	66	65.901	ENSXETG00000008079	esf1	100	56.667	Xenopus_tropicalis
ENSCLAG00000013266	-	77	67.568	ENSXMAG00000017651	esf1	87	68.056	Xiphophorus_maculatus