EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000013419 (Gene tree)
Gene ID: 102023586
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 68505 bases
Position: chrJH721875.1:29107034-29175538
Accession: 102023586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000019557	XRN_N	PF03159.18	8.2e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000019750	XRN2-201	3619	XM_005380952	ENSCLAP00000019557	950 (aa)	XP_005381009	UPI000698D58A

Gene Model

Click here to download ENSCLAG00000013419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000013419	XRN2	71	38.743	ENSCLAG00000001451	XRN1	61	39.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013419	XRN2	100	97.895	ENSG00000088930	XRN2	100	97.895	Homo_sapiens
ENSCLAG00000013419	XRN2	97	71.915	ENSAPOG00000009818	xrn2	100	70.642	Acanthochromis_polyacanthus
ENSCLAG00000013419	XRN2	100	97.895	ENSAMEG00000012581	XRN2	100	97.895	Ailuropoda_melanoleuca
ENSCLAG00000013419	XRN2	90	71.217	ENSACIG00000015047	xrn2	95	75.048	Amphilophus_citrinellus
ENSCLAG00000013419	XRN2	97	72.543	ENSAOCG00000023632	xrn2	100	71.269	Amphiprion_ocellaris
ENSCLAG00000013419	XRN2	97	72.370	ENSAPEG00000014871	xrn2	100	71.079	Amphiprion_percula
ENSCLAG00000013419	XRN2	95	71.831	ENSATEG00000001273	xrn2	97	71.142	Anabas_testudineus
ENSCLAG00000013419	XRN2	97	83.854	ENSAPLG00000013869	XRN2	99	84.284	Anas_platyrhynchos
ENSCLAG00000013419	XRN2	100	81.056	ENSACAG00000005565	XRN2	100	81.056	Anolis_carolinensis
ENSCLAG00000013419	XRN2	100	97.263	ENSANAG00000020126	XRN2	100	97.263	Aotus_nancymaae
ENSCLAG00000013419	XRN2	90	73.988	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSCLAG00000013419	XRN2	100	71.560	ENSAMXG00000018301	xrn2	100	71.560	Astyanax_mexicanus
ENSCLAG00000013419	XRN2	100	96.109	ENSBTAG00000011304	XRN2	100	96.109	Bos_taurus
ENSCLAG00000013419	XRN2	87	55.711	WBGene00006964	xrn-2	89	54.989	Caenorhabditis_elegans
ENSCLAG00000013419	XRN2	100	97.579	ENSCJAG00000005611	XRN2	100	97.579	Callithrix_jacchus
ENSCLAG00000013419	XRN2	100	97.789	ENSCAFG00000005185	XRN2	100	97.789	Canis_familiaris
ENSCLAG00000013419	XRN2	100	97.789	ENSCAFG00020027479	XRN2	100	97.789	Canis_lupus_dingo
ENSCLAG00000013419	XRN2	100	96.320	ENSCHIG00000006921	XRN2	100	96.320	Capra_hircus
ENSCLAG00000013419	XRN2	100	97.579	ENSTSYG00000008315	XRN2	100	97.579	Carlito_syrichta
ENSCLAG00000013419	XRN2	97	83.279	ENSCAPG00000010773	XRN2	99	83.172	Cavia_aperea
ENSCLAG00000013419	XRN2	100	98.737	ENSCPOG00000009407	XRN2	100	98.737	Cavia_porcellus
ENSCLAG00000013419	XRN2	100	98.000	ENSCATG00000040350	XRN2	100	98.000	Cercocebus_atys
ENSCLAG00000013419	XRN2	100	98.000	ENSCSAG00000011094	XRN2	100	98.000	Chlorocebus_sabaeus
ENSCLAG00000013419	XRN2	68	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSCLAG00000013419	XRN2	100	85.312	ENSCPBG00000023533	XRN2	100	85.729	Chrysemys_picta_bellii
ENSCLAG00000013419	XRN2	86	59.905	ENSCING00000022336	-	100	60.263	Ciona_intestinalis
ENSCLAG00000013419	XRN2	87	58.592	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSCLAG00000013419	XRN2	100	98.000	ENSCANG00000040240	XRN2	100	98.000	Colobus_angolensis_palliatus
ENSCLAG00000013419	XRN2	98	96.771	ENSCGRG00001010676	Xrn2	99	96.771	Cricetulus_griseus_chok1gshd
ENSCLAG00000013419	XRN2	97	96.009	ENSCGRG00000006378	Xrn2	99	96.009	Cricetulus_griseus_crigri
ENSCLAG00000013419	XRN2	54	72.549	ENSCSEG00000005628	xrn2	100	72.549	Cynoglossus_semilaevis
ENSCLAG00000013419	XRN2	89	71.839	ENSCVAG00000018999	xrn2	98	77.143	Cyprinodon_variegatus
ENSCLAG00000013419	XRN2	100	69.918	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSCLAG00000013419	XRN2	100	96.947	ENSDNOG00000001895	XRN2	100	96.947	Dasypus_novemcinctus
ENSCLAG00000013419	XRN2	100	95.579	ENSDORG00000005434	Xrn2	100	95.579	Dipodomys_ordii
ENSCLAG00000013419	XRN2	87	56.832	FBgn0031868	Rat1	87	56.711	Drosophila_melanogaster
ENSCLAG00000013419	XRN2	100	83.895	ENSETEG00000001740	XRN2	100	83.895	Echinops_telfairi
ENSCLAG00000013419	XRN2	84	71.515	ENSEBUG00000016136	xrn2	100	71.515	Eptatretus_burgeri
ENSCLAG00000013419	XRN2	100	97.474	ENSEASG00005002484	XRN2	100	97.474	Equus_asinus_asinus
ENSCLAG00000013419	XRN2	99	97.571	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSCLAG00000013419	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSCLAG00000013419	XRN2	100	70.799	ENSELUG00000000552	xrn2	100	71.209	Esox_lucius
ENSCLAG00000013419	XRN2	100	97.789	ENSFCAG00000007970	XRN2	100	97.789	Felis_catus
ENSCLAG00000013419	XRN2	100	83.229	ENSFALG00000004508	XRN2	100	83.648	Ficedula_albicollis
ENSCLAG00000013419	XRN2	100	98.632	ENSFDAG00000016311	XRN2	100	98.632	Fukomys_damarensis
ENSCLAG00000013419	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSCLAG00000013419	XRN2	86	73.147	ENSGMOG00000013436	xrn2	100	73.147	Gadus_morhua
ENSCLAG00000013419	XRN2	100	83.246	ENSGALG00000008372	XRN2	100	83.246	Gallus_gallus
ENSCLAG00000013419	XRN2	89	74.070	ENSGAFG00000014284	xrn2	98	74.070	Gambusia_affinis
ENSCLAG00000013419	XRN2	87	75.000	ENSGACG00000011870	xrn2	100	75.000	Gasterosteus_aculeatus
ENSCLAG00000013419	XRN2	100	85.104	ENSGAGG00000004884	XRN2	100	85.521	Gopherus_agassizii
ENSCLAG00000013419	XRN2	100	98.105	ENSGGOG00000013738	XRN2	100	98.105	Gorilla_gorilla
ENSCLAG00000013419	XRN2	54	74.856	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSCLAG00000013419	XRN2	100	97.684	ENSHGLG00000014831	XRN2	100	97.684	Heterocephalus_glaber_female
ENSCLAG00000013419	XRN2	100	97.684	ENSHGLG00100013130	XRN2	100	97.684	Heterocephalus_glaber_male
ENSCLAG00000013419	XRN2	99	68.522	ENSHCOG00000011994	xrn2	99	69.433	Hippocampus_comes
ENSCLAG00000013419	XRN2	100	70.234	ENSIPUG00000006639	xrn2	100	70.234	Ictalurus_punctatus
ENSCLAG00000013419	XRN2	100	98.421	ENSSTOG00000000589	XRN2	100	98.421	Ictidomys_tridecemlineatus
ENSCLAG00000013419	XRN2	100	96.842	ENSJJAG00000022128	Xrn2	100	96.842	Jaculus_jaculus
ENSCLAG00000013419	XRN2	54	80.078	ENSLBEG00000010041	xrn2	100	80.078	Labrus_bergylta
ENSCLAG00000013419	XRN2	94	77.086	ENSLACG00000008307	XRN2	99	79.509	Latimeria_chalumnae
ENSCLAG00000013419	XRN2	99	73.117	ENSLOCG00000016874	xrn2	100	73.117	Lepisosteus_oculatus
ENSCLAG00000013419	XRN2	100	96.105	ENSLAFG00000014624	XRN2	100	96.105	Loxodonta_africana
ENSCLAG00000013419	XRN2	100	98.000	ENSMFAG00000038122	XRN2	100	98.000	Macaca_fascicularis
ENSCLAG00000013419	XRN2	100	98.000	ENSMMUG00000011405	XRN2	100	98.000	Macaca_mulatta
ENSCLAG00000013419	XRN2	100	98.105	ENSMNEG00000040626	XRN2	100	98.105	Macaca_nemestrina
ENSCLAG00000013419	XRN2	100	97.895	ENSMLEG00000041897	XRN2	100	97.895	Mandrillus_leucophaeus
ENSCLAG00000013419	XRN2	95	73.014	ENSMAMG00000008633	xrn2	98	71.488	Mastacembelus_armatus
ENSCLAG00000013419	XRN2	90	75.954	ENSMZEG00005022362	xrn2	97	75.954	Maylandia_zebra
ENSCLAG00000013419	XRN2	99	81.790	ENSMGAG00000003196	XRN2	99	81.790	Meleagris_gallopavo
ENSCLAG00000013419	XRN2	100	96.947	ENSMAUG00000021842	Xrn2	100	96.947	Mesocricetus_auratus
ENSCLAG00000013419	XRN2	100	97.368	ENSMICG00000008126	XRN2	100	97.368	Microcebus_murinus
ENSCLAG00000013419	XRN2	100	96.316	ENSMOCG00000012588	Xrn2	100	96.316	Microtus_ochrogaster
ENSCLAG00000013419	XRN2	89	73.998	ENSMMOG00000017576	xrn2	96	74.763	Mola_mola
ENSCLAG00000013419	XRN2	100	91.053	ENSMODG00000006163	XRN2	100	91.053	Monodelphis_domestica
ENSCLAG00000013419	XRN2	91	72.360	ENSMALG00000011355	xrn2	99	72.360	Monopterus_albus
ENSCLAG00000013419	XRN2	100	95.899	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.899	Mus_caroli
ENSCLAG00000013419	XRN2	100	96.109	ENSMUSG00000027433	Xrn2	100	96.109	Mus_musculus
ENSCLAG00000013419	XRN2	100	95.899	MGP_PahariEiJ_G0025843	Xrn2	100	95.899	Mus_pahari
ENSCLAG00000013419	XRN2	100	96.109	MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	Mus_spretus
ENSCLAG00000013419	XRN2	100	96.174	ENSMPUG00000001198	XRN2	93	96.174	Mustela_putorius_furo
ENSCLAG00000013419	XRN2	100	97.474	ENSMLUG00000001536	XRN2	100	97.474	Myotis_lucifugus
ENSCLAG00000013419	XRN2	100	97.263	ENSNGAG00000018138	Xrn2	100	97.263	Nannospalax_galili
ENSCLAG00000013419	XRN2	90	76.273	ENSNBRG00000008062	xrn2	97	76.273	Neolamprologus_brichardi
ENSCLAG00000013419	XRN2	100	97.895	ENSNLEG00000009991	XRN2	100	97.895	Nomascus_leucogenys
ENSCLAG00000013419	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSCLAG00000013419	XRN2	75	79.581	ENSOPRG00000001397	-	77	79.581	Ochotona_princeps
ENSCLAG00000013419	XRN2	100	99.158	ENSODEG00000010745	-	100	99.158	Octodon_degus
ENSCLAG00000013419	XRN2	98	89.968	ENSODEG00000000860	-	99	90.399	Octodon_degus
ENSCLAG00000013419	XRN2	100	71.959	ENSONIG00000018720	xrn2	100	72.165	Oreochromis_niloticus
ENSCLAG00000013419	XRN2	100	91.702	ENSOANG00000015673	XRN2	100	91.702	Ornithorhynchus_anatinus
ENSCLAG00000013419	XRN2	100	98.211	ENSOCUG00000013468	XRN2	100	98.211	Oryctolagus_cuniculus
ENSCLAG00000013419	XRN2	98	70.717	ENSORLG00000017213	xrn2	97	75.289	Oryzias_latipes
ENSCLAG00000013419	XRN2	98	70.717	ENSORLG00020001824	xrn2	100	70.367	Oryzias_latipes_hni
ENSCLAG00000013419	XRN2	98	70.509	ENSORLG00015019747	xrn2	100	70.163	Oryzias_latipes_hsok
ENSCLAG00000013419	XRN2	90	74.335	ENSOMEG00000019820	xrn2	100	69.746	Oryzias_melastigma
ENSCLAG00000013419	XRN2	100	96.740	ENSOGAG00000001068	XRN2	100	96.740	Otolemur_garnettii
ENSCLAG00000013419	XRN2	97	96.220	ENSOARG00000004443	XRN2	100	96.220	Ovis_aries
ENSCLAG00000013419	XRN2	100	98.105	ENSPPAG00000033549	XRN2	100	98.105	Pan_paniscus
ENSCLAG00000013419	XRN2	100	97.789	ENSPPRG00000008732	XRN2	100	97.789	Panthera_pardus
ENSCLAG00000013419	XRN2	97	97.730	ENSPTIG00000015683	XRN2	97	97.730	Panthera_tigris_altaica
ENSCLAG00000013419	XRN2	100	98.105	ENSPTRG00000013308	XRN2	100	98.105	Pan_troglodytes
ENSCLAG00000013419	XRN2	100	98.000	ENSPANG00000018088	XRN2	100	98.000	Papio_anubis
ENSCLAG00000013419	XRN2	100	70.931	ENSPKIG00000016889	xrn2	100	70.931	Paramormyrops_kingsleyae
ENSCLAG00000013419	XRN2	81	87.500	ENSPSIG00000014666	XRN2	100	87.500	Pelodiscus_sinensis
ENSCLAG00000013419	XRN2	100	96.421	ENSPEMG00000000111	Xrn2	100	96.421	Peromyscus_maniculatus_bairdii
ENSCLAG00000013419	XRN2	100	70.197	ENSPFOG00000004182	xrn2	99	70.600	Poecilia_formosa
ENSCLAG00000013419	XRN2	89	74.767	ENSPLAG00000007351	xrn2	96	74.767	Poecilia_latipinna
ENSCLAG00000013419	XRN2	94	68.553	ENSPMEG00000011798	xrn2	99	69.423	Poecilia_mexicana
ENSCLAG00000013419	XRN2	89	74.651	ENSPREG00000012452	xrn2	99	73.064	Poecilia_reticulata
ENSCLAG00000013419	XRN2	100	97.474	ENSPPYG00000010755	XRN2	100	97.474	Pongo_abelii
ENSCLAG00000013419	XRN2	100	90.756	ENSPCAG00000011191	XRN2	100	90.756	Procavia_capensis
ENSCLAG00000013419	XRN2	100	90.105	ENSPCOG00000016468	XRN2	100	90.105	Propithecus_coquereli
ENSCLAG00000013419	XRN2	93	95.137	ENSPVAG00000004596	XRN2	93	95.137	Pteropus_vampyrus
ENSCLAG00000013419	XRN2	90	73.988	ENSPNYG00000001765	xrn2	97	73.988	Pundamilia_nyererei
ENSCLAG00000013419	XRN2	100	71.865	ENSPNAG00000010956	xrn2	99	71.865	Pygocentrus_nattereri
ENSCLAG00000013419	XRN2	100	96.951	ENSRNOG00000011785	Xrn2	100	96.951	Rattus_norvegicus
ENSCLAG00000013419	XRN2	86	97.922	ENSRBIG00000036193	XRN2	100	97.922	Rhinopithecus_bieti
ENSCLAG00000013419	XRN2	100	98.000	ENSRROG00000044400	XRN2	90	98.000	Rhinopithecus_roxellana
ENSCLAG00000013419	XRN2	69	52.283	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSCLAG00000013419	XRN2	100	97.579	ENSSBOG00000021014	XRN2	100	97.579	Saimiri_boliviensis_boliviensis
ENSCLAG00000013419	XRN2	100	72.016	ENSSFOG00015001091	xrn2	100	72.016	Scleropages_formosus
ENSCLAG00000013419	XRN2	92	73.251	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSCLAG00000013419	XRN2	91	72.172	ENSSDUG00000012802	xrn2	99	72.511	Seriola_dumerili
ENSCLAG00000013419	XRN2	93	73.785	ENSSLDG00000021273	xrn2	100	73.785	Seriola_lalandi_dorsalis
ENSCLAG00000013419	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSCLAG00000013419	XRN2	98	80.235	ENSSPUG00000005485	XRN2	96	80.342	Sphenodon_punctatus
ENSCLAG00000013419	XRN2	100	71.034	ENSSPAG00000016027	xrn2	99	71.034	Stegastes_partitus
ENSCLAG00000013419	XRN2	100	95.789	ENSSSCG00000007109	XRN2	100	95.789	Sus_scrofa
ENSCLAG00000013419	XRN2	100	82.255	ENSTGUG00000007535	XRN2	100	82.672	Taeniopygia_guttata
ENSCLAG00000013419	XRN2	100	68.315	ENSTRUG00000015489	xrn2	100	68.687	Takifugu_rubripes
ENSCLAG00000013419	XRN2	100	71.132	ENSTNIG00000010712	xrn2	100	71.132	Tetraodon_nigroviridis
ENSCLAG00000013419	XRN2	100	97.474	ENSTBEG00000004119	XRN2	100	97.474	Tupaia_belangeri
ENSCLAG00000013419	XRN2	93	97.658	ENSTTRG00000009087	XRN2	93	97.658	Tursiops_truncatus
ENSCLAG00000013419	XRN2	100	98.000	ENSUAMG00000024634	XRN2	100	98.000	Ursus_americanus
ENSCLAG00000013419	XRN2	97	97.730	ENSUMAG00000004012	XRN2	95	97.730	Ursus_maritimus
ENSCLAG00000013419	XRN2	89	90.296	ENSVPAG00000010694	XRN2	91	90.296	Vicugna_pacos
ENSCLAG00000013419	XRN2	100	97.895	ENSVVUG00000012178	XRN2	100	97.895	Vulpes_vulpes
ENSCLAG00000013419	XRN2	100	74.453	ENSXETG00000023501	xrn2	100	75.078	Xenopus_tropicalis
ENSCLAG00000013419	XRN2	100	68.756	ENSXMAG00000000242	xrn2	92	79.319	Xiphophorus_maculatus