EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000013454 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 985 bases
Position: chrJH721880.1:2731142-2732126
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000019603	RRM_1	PF00076.22	7.4e-16	1	1
ENSCLAP00000019604	RRM_1	PF00076.22	7.9e-16	1	1
ENSCLAP00000019603	HnRNPA1	PF11627.8	8.7e-14	1	1
ENSCLAP00000019604	HnRNPA1	PF11627.8	9.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000019796	-	870	-	ENSCLAP00000019603	289 (aa)	-	-
ENSCLAT00000019797	-	891	-	ENSCLAP00000019604	296 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000013454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000013454	-	82	62.257	ENSCLAG00000012855	HNRNPA3	76	63.538
ENSCLAG00000013454	-	78	67.105	ENSCLAG00000007120	-	53	47.778
ENSCLAG00000013454	-	68	50.761	ENSCLAG00000007977	-	58	60.645
ENSCLAG00000013454	-	85	45.560	ENSCLAG00000008626	-	50	54.375
ENSCLAG00000013454	-	94	68.259	ENSCLAG00000015184	-	78	68.070
ENSCLAG00000013454	-	93	50.370	ENSCLAG00000014058	HNRNPA2B1	52	69.531

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013454	-	91	63.406	ENSANAG00000033364	-	54	76.875	Aotus_nancymaae
ENSCLAG00000013454	-	51	66.875	ENSANAG00000030267	-	62	66.875	Aotus_nancymaae
ENSCLAG00000013454	-	55	75.145	ENSBTAG00000045772	-	73	73.818	Bos_taurus
ENSCLAG00000013454	-	51	75.625	ENSBTAG00000052891	-	56	75.625	Bos_taurus
ENSCLAG00000013454	-	51	66.875	ENSBTAG00000048345	-	55	66.875	Bos_taurus
ENSCLAG00000013454	-	51	78.125	ENSCJAG00000023383	-	59	78.125	Callithrix_jacchus
ENSCLAG00000013454	-	52	69.939	ENSCJAG00000041746	-	60	70.000	Callithrix_jacchus
ENSCLAG00000013454	-	51	78.750	ENSCAFG00020006299	-	57	78.750	Canis_lupus_dingo
ENSCLAG00000013454	-	51	74.675	ENSCHIG00000011332	-	62	74.675	Capra_hircus
ENSCLAG00000013454	-	94	64.211	ENSTSYG00000036821	-	53	65.934	Carlito_syrichta
ENSCLAG00000013454	-	51	75.000	ENSCAPG00000013321	-	69	75.000	Cavia_aperea
ENSCLAG00000013454	-	51	78.750	ENSCPOG00000004251	HNRNPA3	70	63.538	Cavia_porcellus
ENSCLAG00000013454	-	96	67.241	ENSCCAG00000021011	-	65	73.423	Cebus_capucinus
ENSCLAG00000013454	-	51	73.750	ENSCCAG00000037906	-	63	73.750	Cebus_capucinus
ENSCLAG00000013454	-	57	67.797	ENSCCAG00000028618	-	72	68.571	Cebus_capucinus
ENSCLAG00000013454	-	58	69.613	ENSCCAG00000031612	-	66	69.613	Cebus_capucinus
ENSCLAG00000013454	-	91	67.159	ENSCCAG00000035178	-	73	66.790	Cebus_capucinus
ENSCLAG00000013454	-	96	69.257	ENSCATG00000041727	-	57	63.125	Cercocebus_atys
ENSCLAG00000013454	-	94	67.029	ENSCANG00000036899	-	90	66.038	Colobus_angolensis_palliatus
ENSCLAG00000013454	-	75	67.580	ENSCANG00000041842	-	65	67.580	Colobus_angolensis_palliatus
ENSCLAG00000013454	-	51	78.750	ENSCGRG00001008592	Hnrnpa3	70	63.538	Cricetulus_griseus_chok1gshd
ENSCLAG00000013454	-	51	73.684	ENSCGRG00001000392	-	50	73.684	Cricetulus_griseus_chok1gshd
ENSCLAG00000013454	-	93	53.309	ENSCGRG00000006419	-	69	57.087	Cricetulus_griseus_crigri
ENSCLAG00000013454	-	51	76.871	ENSCGRG00000012749	-	57	76.871	Cricetulus_griseus_crigri
ENSCLAG00000013454	-	51	78.750	ENSCGRG00000002408	Hnrnpa3	76	63.538	Cricetulus_griseus_crigri
ENSCLAG00000013454	-	89	38.078	ENSDARG00000036161	hnrnpa0l	52	47.771	Danio_rerio
ENSCLAG00000013454	-	53	64.458	ENSDNOG00000044709	-	51	65.625	Dasypus_novemcinctus
ENSCLAG00000013454	-	50	75.316	ENSDORG00000028230	-	51	75.316	Dipodomys_ordii
ENSCLAG00000013454	-	98	89.474	ENSDORG00000024966	-	66	73.125	Dipodomys_ordii
ENSCLAG00000013454	-	52	59.355	ENSETEG00000011413	-	65	59.477	Echinops_telfairi
ENSCLAG00000013454	-	51	53.086	ENSETEG00000012195	-	64	53.086	Echinops_telfairi
ENSCLAG00000013454	-	97	59.498	ENSEASG00005022530	HNRNPA3	73	59.206	Equus_asinus_asinus
ENSCLAG00000013454	-	51	66.875	ENSFCAG00000033796	-	73	48.375	Felis_catus
ENSCLAG00000013454	-	96	54.325	ENSGGOG00000039142	-	58	59.119	Gorilla_gorilla
ENSCLAG00000013454	-	65	66.829	ENSGGOG00000041716	-	89	68.551	Gorilla_gorilla
ENSCLAG00000013454	-	50	74.522	ENSGGOG00000022020	-	66	74.522	Gorilla_gorilla
ENSCLAG00000013454	-	51	78.750	ENSHGLG00000005451	HNRNPA3	70	63.538	Heterocephalus_glaber_female
ENSCLAG00000013454	-	87	68.651	ENSHGLG00000008275	-	53	71.658	Heterocephalus_glaber_female
ENSCLAG00000013454	-	51	76.730	ENSHGLG00000014445	-	58	76.250	Heterocephalus_glaber_female
ENSCLAG00000013454	-	52	75.460	ENSSTOG00000025292	-	60	76.250	Ictidomys_tridecemlineatus
ENSCLAG00000013454	-	91	63.538	ENSSTOG00000025125	HNRNPA3	70	63.177	Ictidomys_tridecemlineatus
ENSCLAG00000013454	-	82	57.831	ENSSTOG00000034897	-	66	46.117	Ictidomys_tridecemlineatus
ENSCLAG00000013454	-	60	69.730	ENSSTOG00000025330	-	75	65.704	Ictidomys_tridecemlineatus
ENSCLAG00000013454	-	55	70.286	ENSJJAG00000001446	-	52	58.152	Jaculus_jaculus
ENSCLAG00000013454	-	51	78.750	ENSJJAG00000000149	Hnrnpa3	70	63.538	Jaculus_jaculus
ENSCLAG00000013454	-	51	75.000	ENSMFAG00000032902	-	58	75.000	Macaca_fascicularis
ENSCLAG00000013454	-	91	68.310	ENSMFAG00000031209	-	66	66.875	Macaca_fascicularis
ENSCLAG00000013454	-	91	69.014	ENSMMUG00000045923	-	54	68.125	Macaca_mulatta
ENSCLAG00000013454	-	91	59.567	ENSMMUG00000001858	-	55	79.191	Macaca_mulatta
ENSCLAG00000013454	-	50	78.481	ENSMNEG00000026512	-	90	75.089	Macaca_nemestrina
ENSCLAG00000013454	-	83	83.871	ENSMNEG00000039618	-	67	64.375	Macaca_nemestrina
ENSCLAG00000013454	-	52	75.460	ENSMLEG00000032671	-	50	75.625	Mandrillus_leucophaeus
ENSCLAG00000013454	-	91	62.082	ENSMLEG00000037759	-	53	68.027	Mandrillus_leucophaeus
ENSCLAG00000013454	-	51	76.250	ENSMGAG00000009565	HNRNPA3	69	56.757	Meleagris_gallopavo
ENSCLAG00000013454	-	51	71.250	ENSMAUG00000015650	-	50	71.250	Mesocricetus_auratus
ENSCLAG00000013454	-	91	61.372	ENSMOCG00000019409	-	55	79.012	Microtus_ochrogaster
ENSCLAG00000013454	-	51	78.750	ENSMUSG00000059005	Hnrnpa3	70	63.538	Mus_musculus
ENSCLAG00000013454	-	62	65.285	ENSMPUG00000018063	-	58	76.875	Mustela_putorius_furo
ENSCLAG00000013454	-	51	78.750	ENSMPUG00000014103	-	59	78.750	Mustela_putorius_furo
ENSCLAG00000013454	-	58	63.187	ENSMPUG00000009761	-	60	70.149	Mustela_putorius_furo
ENSCLAG00000013454	-	51	78.750	ENSMLUG00000003906	-	50	78.750	Myotis_lucifugus
ENSCLAG00000013454	-	58	70.879	ENSNGAG00000003815	-	74	72.085	Nannospalax_galili
ENSCLAG00000013454	-	91	60.498	ENSNGAG00000021745	Hnrnpa3	70	60.650	Nannospalax_galili
ENSCLAG00000013454	-	92	77.397	ENSNLEG00000015913	-	55	75.625	Nomascus_leucogenys
ENSCLAG00000013454	-	51	70.625	ENSNLEG00000034545	-	64	70.625	Nomascus_leucogenys
ENSCLAG00000013454	-	58	76.923	ENSNLEG00000010858	-	90	76.678	Nomascus_leucogenys
ENSCLAG00000013454	-	60	62.162	ENSNLEG00000032894	-	56	65.409	Nomascus_leucogenys
ENSCLAG00000013454	-	50	75.949	ENSODEG00000008615	-	53	75.949	Octodon_degus
ENSCLAG00000013454	-	71	68.950	ENSOCUG00000002743	-	50	77.640	Oryctolagus_cuniculus
ENSCLAG00000013454	-	94	71.034	ENSOGAG00000025948	-	79	71.631	Otolemur_garnettii
ENSCLAG00000013454	-	58	66.484	ENSPPAG00000030037	-	62	73.885	Pan_paniscus
ENSCLAG00000013454	-	51	73.125	ENSPPRG00000022001	-	72	73.125	Panthera_pardus
ENSCLAG00000013454	-	94	50.877	ENSPPRG00000009266	-	51	63.125	Panthera_pardus
ENSCLAG00000013454	-	94	51.228	ENSPTIG00000021689	-	51	63.125	Panthera_tigris_altaica
ENSCLAG00000013454	-	62	62.921	ENSPTRG00000018253	-	55	73.418	Pan_troglodytes
ENSCLAG00000013454	-	51	78.750	ENSPTRG00000012676	HNRNPA3	71	78.970	Pan_troglodytes
ENSCLAG00000013454	-	51	73.750	ENSPTRG00000052291	-	54	73.750	Pan_troglodytes
ENSCLAG00000013454	-	88	66.065	ENSPTRG00000045446	-	79	78.333	Pan_troglodytes
ENSCLAG00000013454	-	73	68.493	ENSPANG00000019564	-	58	67.232	Papio_anubis
ENSCLAG00000013454	-	91	60.949	ENSPANG00000035630	-	53	65.789	Papio_anubis
ENSCLAG00000013454	-	91	60.650	ENSPANG00000013447	-	69	63.679	Papio_anubis
ENSCLAG00000013454	-	91	67.391	ENSPEMG00000014669	-	72	75.352	Peromyscus_maniculatus_bairdii
ENSCLAG00000013454	-	97	50.178	ENSPLAG00000009033	HNRNPA3	56	61.392	Poecilia_latipinna
ENSCLAG00000013454	-	87	53.937	ENSPPYG00000003382	-	58	58.442	Pongo_abelii
ENSCLAG00000013454	-	88	68.914	ENSPCOG00000020527	-	59	72.109	Propithecus_coquereli
ENSCLAG00000013454	-	92	55.769	ENSSBOG00000020259	-	74	49.291	Saimiri_boliviensis_boliviensis
ENSCLAG00000013454	-	96	53.873	ENSSSCG00000038749	-	51	55.333	Sus_scrofa
ENSCLAG00000013454	-	72	63.964	ENSSSCG00000036878	-	53	54.639	Sus_scrofa
ENSCLAG00000013454	-	96	74.476	ENSTTRG00000015563	-	83	75.182	Tursiops_truncatus
ENSCLAG00000013454	-	50	78.481	ENSUMAG00000015686	-	86	78.481	Ursus_maritimus
ENSCLAG00000013454	-	51	65.000	ENSVVUG00000012340	-	58	65.000	Vulpes_vulpes