EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000013730 (Gene tree)
Gene ID: 102010761
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 21859 bases
Position: chrJH721911.1:14784915-14806773
Accession: 102010761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000020038	Btz	PF09405.10	1.2e-23	1	1
ENSCLAP00000020039	Btz	PF09405.10	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000020231	CASC3-201	7085	XM_005394350	ENSCLAP00000020038	702 (aa)	XP_005394407	UPI00038EC158
ENSCLAT00000020232	CASC3-202	2638	-	ENSCLAP00000020039	702 (aa)	-	UPI00038EC158

Gene Model

Click here to download ENSCLAG00000013730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013730	CASC3	100	89.900	ENSG00000108349	CASC3	100	90.327	Homo_sapiens
ENSCLAG00000013730	CASC3	100	91.038	ENSAMEG00000007764	CASC3	100	91.181	Ailuropoda_melanoleuca
ENSCLAG00000013730	CASC3	78	51.361	ENSACIG00000000720	casc3	83	50.272	Amphilophus_citrinellus
ENSCLAG00000013730	CASC3	75	53.185	ENSAOCG00000016676	casc3	77	53.094	Amphiprion_ocellaris
ENSCLAG00000013730	CASC3	84	53.185	ENSAPEG00000006787	casc3	77	52.769	Amphiprion_percula
ENSCLAG00000013730	CASC3	74	55.556	ENSATEG00000017196	casc3	76	53.247	Anabas_testudineus
ENSCLAG00000013730	CASC3	91	69.846	ENSACAG00000002674	CASC3	99	65.021	Anolis_carolinensis
ENSCLAG00000013730	CASC3	99	79.076	ENSANAG00000034820	-	99	85.251	Aotus_nancymaae
ENSCLAG00000013730	CASC3	65	98.571	ENSANAG00000031954	-	100	98.571	Aotus_nancymaae
ENSCLAG00000013730	CASC3	100	89.474	ENSBTAG00000006250	CASC3	100	89.616	Bos_taurus
ENSCLAG00000013730	CASC3	100	87.767	ENSCJAG00000016032	CASC3	100	88.193	Callithrix_jacchus
ENSCLAG00000013730	CASC3	100	90.754	ENSCAFG00000016141	CASC3	100	90.896	Canis_familiaris
ENSCLAG00000013730	CASC3	100	89.915	ENSCAFG00020018882	CASC3	100	90.759	Canis_lupus_dingo
ENSCLAG00000013730	CASC3	100	88.620	ENSCHIG00000006338	CASC3	100	88.762	Capra_hircus
ENSCLAG00000013730	CASC3	100	84.211	ENSTSYG00000002975	CASC3	89	91.814	Carlito_syrichta
ENSCLAG00000013730	CASC3	88	93.506	ENSCAPG00000010514	CASC3	100	93.506	Cavia_aperea
ENSCLAG00000013730	CASC3	100	93.162	ENSCPOG00000015139	CASC3	100	92.877	Cavia_porcellus
ENSCLAG00000013730	CASC3	100	88.778	ENSCCAG00000033620	CASC3	100	89.631	Cebus_capucinus
ENSCLAG00000013730	CASC3	100	90.057	ENSCATG00000033593	CASC3	100	90.483	Cercocebus_atys
ENSCLAG00000013730	CASC3	100	90.199	ENSCSAG00000002777	CASC3	100	90.625	Chlorocebus_sabaeus
ENSCLAG00000013730	CASC3	99	73.174	ENSCPBG00000004750	CASC3	98	73.643	Chrysemys_picta_bellii
ENSCLAG00000013730	CASC3	100	89.915	ENSCANG00000008814	CASC3	100	90.341	Colobus_angolensis_palliatus
ENSCLAG00000013730	CASC3	100	88.889	ENSCGRG00001014706	Casc3	100	88.889	Cricetulus_griseus_chok1gshd
ENSCLAG00000013730	CASC3	100	83.191	ENSCGRG00000001952	Casc3	100	82.621	Cricetulus_griseus_crigri
ENSCLAG00000013730	CASC3	83	51.911	ENSCSEG00000010047	casc3	57	63.158	Cynoglossus_semilaevis
ENSCLAG00000013730	CASC3	100	89.758	ENSDNOG00000017249	CASC3	96	89.900	Dasypus_novemcinctus
ENSCLAG00000013730	CASC3	100	84.330	ENSETEG00000013720	CASC3	100	84.188	Echinops_telfairi
ENSCLAG00000013730	CASC3	99	37.566	ENSEBUG00000010654	casc3	98	36.849	Eptatretus_burgeri
ENSCLAG00000013730	CASC3	100	89.504	ENSEASG00005002909	CASC3	100	90.533	Equus_asinus_asinus
ENSCLAG00000013730	CASC3	100	90.612	ENSECAG00000019947	CASC3	88	90.754	Equus_caballus
ENSCLAG00000013730	CASC3	73	84.766	ENSEEUG00000014253	CASC3	100	85.352	Erinaceus_europaeus
ENSCLAG00000013730	CASC3	100	90.754	ENSFCAG00000014998	CASC3	100	90.896	Felis_catus
ENSCLAG00000013730	CASC3	88	72.613	ENSFALG00000000412	CASC3	98	72.756	Ficedula_albicollis
ENSCLAG00000013730	CASC3	93	90.868	ENSFDAG00000020696	CASC3	100	90.411	Fukomys_damarensis
ENSCLAG00000013730	CASC3	79	55.947	ENSFHEG00000015793	casc3	77	53.618	Fundulus_heteroclitus
ENSCLAG00000013730	CASC3	90	74.686	ENSGALG00000031813	CASC3	99	68.848	Gallus_gallus
ENSCLAG00000013730	CASC3	82	51.803	ENSGAFG00000017148	casc3	67	49.346	Gambusia_affinis
ENSCLAG00000013730	CASC3	89	75.199	ENSGAGG00000008432	CASC3	91	81.193	Gopherus_agassizii
ENSCLAG00000013730	CASC3	100	89.758	ENSGGOG00000005067	CASC3	100	90.185	Gorilla_gorilla
ENSCLAG00000013730	CASC3	100	92.745	ENSHGLG00000012117	CASC3	100	92.888	Heterocephalus_glaber_female
ENSCLAG00000013730	CASC3	89	92.652	ENSHGLG00100002268	CASC3	99	92.616	Heterocephalus_glaber_male
ENSCLAG00000013730	CASC3	100	90.469	ENSSTOG00000006374	CASC3	100	90.612	Ictidomys_tridecemlineatus
ENSCLAG00000013730	CASC3	100	87.926	ENSJJAG00000023525	Casc3	100	88.068	Jaculus_jaculus
ENSCLAG00000013730	CASC3	64	62.185	ENSKMAG00000019507	casc3	81	48.958	Kryptolebias_marmoratus
ENSCLAG00000013730	CASC3	72	68.531	ENSLBEG00000005435	casc3	57	61.798	Labrus_bergylta
ENSCLAG00000013730	CASC3	98	56.303	ENSLACG00000013200	CASC3	99	53.899	Latimeria_chalumnae
ENSCLAG00000013730	CASC3	69	73.430	ENSLOCG00000013518	casc3	65	70.531	Lepisosteus_oculatus
ENSCLAG00000013730	CASC3	100	88.905	ENSLAFG00000000606	CASC3	100	89.047	Loxodonta_africana
ENSCLAG00000013730	CASC3	100	90.057	ENSMFAG00000041496	CASC3	99	92.053	Macaca_fascicularis
ENSCLAG00000013730	CASC3	100	90.057	ENSMMUG00000045187	CASC3	100	90.483	Macaca_mulatta
ENSCLAG00000013730	CASC3	89	90.590	ENSMLEG00000029049	CASC3	98	90.545	Mandrillus_leucophaeus
ENSCLAG00000013730	CASC3	75	54.510	ENSMAMG00000005235	casc3	69	56.299	Mastacembelus_armatus
ENSCLAG00000013730	CASC3	86	74.013	ENSMGAG00000013247	CASC3	99	71.870	Meleagris_gallopavo
ENSCLAG00000013730	CASC3	71	88.000	ENSMAUG00000006023	Casc3	96	87.649	Mesocricetus_auratus
ENSCLAG00000013730	CASC3	100	89.362	ENSMICG00000003321	CASC3	100	90.483	Microcebus_murinus
ENSCLAG00000013730	CASC3	100	88.034	ENSMOCG00000013644	Casc3	100	87.037	Microtus_ochrogaster
ENSCLAG00000013730	CASC3	100	76.847	ENSMODG00000013044	CASC3	92	77.557	Monodelphis_domestica
ENSCLAG00000013730	CASC3	100	87.892	MGP_CAROLIEiJ_G0017099	Casc3	100	87.179	Mus_caroli
ENSCLAG00000013730	CASC3	100	87.464	ENSMUSG00000078676	Casc3	100	86.752	Mus_musculus
ENSCLAG00000013730	CASC3	100	87.607	MGP_SPRETEiJ_G0017943	Casc3	100	86.895	Mus_spretus
ENSCLAG00000013730	CASC3	100	90.469	ENSMPUG00000014903	CASC3	100	90.612	Mustela_putorius_furo
ENSCLAG00000013730	CASC3	100	87.518	ENSMLUG00000010520	CASC3	100	88.085	Myotis_lucifugus
ENSCLAG00000013730	CASC3	100	87.322	ENSNGAG00000023121	Casc3	100	87.037	Nannospalax_galili
ENSCLAG00000013730	CASC3	100	88.762	ENSNLEG00000001598	CASC3	100	89.189	Nomascus_leucogenys
ENSCLAG00000013730	CASC3	73	85.323	ENSOPRG00000007240	-	79	95.833	Ochotona_princeps
ENSCLAG00000013730	CASC3	100	93.909	ENSODEG00000017858	CASC3	100	94.193	Octodon_degus
ENSCLAG00000013730	CASC3	79	53.646	ENSOANG00000003499	-	96	52.931	Ornithorhynchus_anatinus
ENSCLAG00000013730	CASC3	100	89.047	ENSOCUG00000002954	CASC3	100	88.905	Oryctolagus_cuniculus
ENSCLAG00000013730	CASC3	100	89.235	ENSOGAG00000034486	CASC3	98	89.843	Otolemur_garnettii
ENSCLAG00000013730	CASC3	100	89.616	ENSOARG00000013239	CASC3	100	89.758	Ovis_aries
ENSCLAG00000013730	CASC3	100	89.900	ENSPPAG00000035069	CASC3	100	90.327	Pan_paniscus
ENSCLAG00000013730	CASC3	100	90.754	ENSPPRG00000023670	CASC3	100	90.896	Panthera_pardus
ENSCLAG00000013730	CASC3	91	90.581	ENSPTIG00000010891	CASC3	91	90.581	Panthera_tigris_altaica
ENSCLAG00000013730	CASC3	100	90.057	ENSPANG00000021708	CASC3	100	90.483	Papio_anubis
ENSCLAG00000013730	CASC3	99	47.919	ENSPKIG00000023186	casc3	98	44.707	Paramormyrops_kingsleyae
ENSCLAG00000013730	CASC3	100	88.177	ENSPEMG00000009774	Casc3	100	87.892	Peromyscus_maniculatus_bairdii
ENSCLAG00000013730	CASC3	100	80.540	ENSPCIG00000025678	CASC3	100	80.966	Phascolarctos_cinereus
ENSCLAG00000013730	CASC3	89	48.407	ENSPFOG00000017632	casc3	100	46.060	Poecilia_formosa
ENSCLAG00000013730	CASC3	81	53.200	ENSPLAG00000005268	casc3	77	54.723	Poecilia_latipinna
ENSCLAG00000013730	CASC3	68	47.667	ENSPMEG00000010299	casc3	73	48.673	Poecilia_mexicana
ENSCLAG00000013730	CASC3	69	65.714	ENSPREG00000011856	casc3	82	50.180	Poecilia_reticulata
ENSCLAG00000013730	CASC3	100	88.478	ENSPPYG00000008467	CASC3	100	90.185	Pongo_abelii
ENSCLAG00000013730	CASC3	100	88.905	ENSPCOG00000008183	CASC3	100	90.043	Propithecus_coquereli
ENSCLAG00000013730	CASC3	100	89.758	ENSPVAG00000008556	CASC3	100	89.900	Pteropus_vampyrus
ENSCLAG00000013730	CASC3	91	89.676	ENSRNOG00000009716	Casc3	100	89.381	Rattus_norvegicus
ENSCLAG00000013730	CASC3	100	90.199	ENSRBIG00000033289	CASC3	100	89.489	Rhinopithecus_bieti
ENSCLAG00000013730	CASC3	100	90.199	ENSRROG00000022337	CASC3	100	90.625	Rhinopithecus_roxellana
ENSCLAG00000013730	CASC3	88	88.350	ENSSBOG00000031406	CASC3	98	90.129	Saimiri_boliviensis_boliviensis
ENSCLAG00000013730	CASC3	89	82.325	ENSSHAG00000013338	CASC3	99	81.760	Sarcophilus_harrisii
ENSCLAG00000013730	CASC3	68	68.056	ENSSMAG00000016096	casc3	56	63.580	Scophthalmus_maximus
ENSCLAG00000013730	CASC3	61	75.424	ENSSLDG00000020308	casc3	66	75.424	Seriola_lalandi_dorsalis
ENSCLAG00000013730	CASC3	85	78.114	ENSSARG00000010378	CASC3	98	78.209	Sorex_araneus
ENSCLAG00000013730	CASC3	89	50.000	ENSSPAG00000023008	casc3	77	52.492	Stegastes_partitus
ENSCLAG00000013730	CASC3	89	88.978	ENSSSCG00000017477	CASC3	98	88.925	Sus_scrofa
ENSCLAG00000013730	CASC3	74	72.624	ENSTGUG00000002300	CASC3	99	72.571	Taeniopygia_guttata
ENSCLAG00000013730	CASC3	90	49.622	ENSTNIG00000003208	casc3	99	46.049	Tetraodon_nigroviridis
ENSCLAG00000013730	CASC3	66	96.698	ENSTBEG00000017459	CASC3	67	96.698	Tupaia_belangeri
ENSCLAG00000013730	CASC3	86	79.470	ENSTTRG00000016896	CASC3	98	79.392	Tursiops_truncatus
ENSCLAG00000013730	CASC3	100	89.773	ENSUAMG00000015116	CASC3	100	90.820	Ursus_americanus
ENSCLAG00000013730	CASC3	89	90.096	ENSUMAG00000017697	CASC3	99	91.710	Ursus_maritimus
ENSCLAG00000013730	CASC3	75	99.160	ENSVPAG00000000799	CASC3	75	99.160	Vicugna_pacos
ENSCLAG00000013730	CASC3	100	90.754	ENSVVUG00000000997	CASC3	100	90.896	Vulpes_vulpes
ENSCLAG00000013730	CASC3	89	59.055	ENSXETG00000024395	casc3	98	56.224	Xenopus_tropicalis
ENSCLAG00000013730	CASC3	50	50.141	ENSXMAG00000013937	casc3	77	52.117	Xiphophorus_maculatus