EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000013743 (Gene tree)
Gene ID: 102028808
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 200964 bases
Position: chrJH721905.1:15360025-15560988
Accession: 102028808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000020059	ResIII	PF04851.15	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000020253	CHD6-202	645	-	ENSCLAP00000020060	214 (aa)	-	-
ENSCLAT00000020252	CHD6-201	8379	XM_005392507	ENSCLAP00000020059	2724 (aa)	XP_005392564	UPI00038EB453

Gene Model

Click here to download ENSCLAG00000013743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000013743	CHD6	73	69.017	ENSCLAG00000004679	CHD7	71	66.294
ENSCLAG00000013743	CHD6	75	65.472	ENSCLAG00000007137	CHD9	90	68.750
ENSCLAG00000013743	CHD6	62	60.883	ENSCLAG00000001966	CHD8	63	62.907

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013743	CHD6	100	91.529	ENSG00000124177	CHD6	99	99.660	Homo_sapiens
ENSCLAG00000013743	CHD6	77	71.831	ENSAPOG00000013736	chd6	67	72.512	Acanthochromis_polyacanthus
ENSCLAG00000013743	CHD6	100	90.312	ENSAMEG00000009496	CHD6	100	90.312	Ailuropoda_melanoleuca
ENSCLAG00000013743	CHD6	74	75.729	ENSATEG00000005608	chd6	71	67.665	Anabas_testudineus
ENSCLAG00000013743	CHD6	99	71.862	ENSAPLG00000015592	CHD6	100	72.505	Anas_platyrhynchos
ENSCLAG00000013743	CHD6	92	75.084	ENSACAG00000006842	CHD6	90	76.395	Anolis_carolinensis
ENSCLAG00000013743	CHD6	100	90.686	ENSANAG00000037548	CHD6	99	93.211	Aotus_nancymaae
ENSCLAG00000013743	CHD6	76	73.709	ENSAMXG00000009576	chd6	77	69.732	Astyanax_mexicanus
ENSCLAG00000013743	CHD6	100	87.170	ENSBTAG00000005733	CHD6	100	87.170	Bos_taurus
ENSCLAG00000013743	CHD6	100	90.722	ENSCJAG00000017920	CHD6	99	93.028	Callithrix_jacchus
ENSCLAG00000013743	CHD6	100	90.202	ENSCAFG00000009236	CHD6	100	90.128	Canis_familiaris
ENSCLAG00000013743	CHD6	99	89.609	ENSCAFG00020012906	CHD6	99	97.116	Canis_lupus_dingo
ENSCLAG00000013743	CHD6	100	87.060	ENSCHIG00000017606	CHD6	100	87.060	Capra_hircus
ENSCLAG00000013743	CHD6	84	90.559	ENSTSYG00000014635	CHD6	100	90.559	Carlito_syrichta
ENSCLAG00000013743	CHD6	100	95.301	ENSCPOG00000015641	CHD6	100	95.338	Cavia_porcellus
ENSCLAG00000013743	CHD6	100	90.906	ENSCCAG00000036828	CHD6	99	93.211	Cebus_capucinus
ENSCLAG00000013743	CHD6	100	90.979	ENSCATG00000039248	CHD6	99	93.211	Cercocebus_atys
ENSCLAG00000013743	CHD6	100	91.272	ENSCSAG00000013997	CHD6	100	91.272	Chlorocebus_sabaeus
ENSCLAG00000013743	CHD6	91	89.130	ENSCHOG00000012647	CHD6	95	89.130	Choloepus_hoffmanni
ENSCLAG00000013743	CHD6	99	73.090	ENSCPBG00000019382	CHD6	99	73.548	Chrysemys_picta_bellii
ENSCLAG00000013743	CHD6	100	91.309	ENSCANG00000043435	CHD6	99	93.211	Colobus_angolensis_palliatus
ENSCLAG00000013743	CHD6	100	89.541	ENSCGRG00001002694	Chd6	100	89.541	Cricetulus_griseus_chok1gshd
ENSCLAG00000013743	CHD6	82	73.377	ENSDARG00000017244	chd6	79	73.377	Danio_rerio
ENSCLAG00000013743	CHD6	99	89.142	ENSDNOG00000004176	CHD6	99	89.142	Dasypus_novemcinctus
ENSCLAG00000013743	CHD6	99	90.310	ENSEASG00005023433	CHD6	95	97.490	Equus_asinus_asinus
ENSCLAG00000013743	CHD6	99	91.076	ENSECAG00000011761	CHD6	100	91.113	Equus_caballus
ENSCLAG00000013743	CHD6	70	79.817	ENSELUG00000012309	chd6	89	79.908	Esox_lucius
ENSCLAG00000013743	CHD6	100	90.165	ENSFCAG00000003572	CHD6	100	90.165	Felis_catus
ENSCLAG00000013743	CHD6	99	71.341	ENSFALG00000012563	CHD6	98	71.310	Ficedula_albicollis
ENSCLAG00000013743	CHD6	99	94.880	ENSFDAG00000013791	CHD6	99	94.880	Fukomys_damarensis
ENSCLAG00000013743	CHD6	73	69.264	ENSGMOG00000011715	chd6	85	69.407	Gadus_morhua
ENSCLAG00000013743	CHD6	79	69.529	ENSGACG00000000037	chd6	86	69.645	Gasterosteus_aculeatus
ENSCLAG00000013743	CHD6	100	91.419	ENSGGOG00000013123	CHD6	99	93.211	Gorilla_gorilla
ENSCLAG00000013743	CHD6	77	72.351	ENSHBUG00000014701	chd6	65	73.295	Haplochromis_burtoni
ENSCLAG00000013743	CHD6	100	95.193	ENSHGLG00000004548	CHD6	100	95.266	Heterocephalus_glaber_female
ENSCLAG00000013743	CHD6	100	95.193	ENSHGLG00100006401	CHD6	100	95.266	Heterocephalus_glaber_male
ENSCLAG00000013743	CHD6	80	74.037	ENSIPUG00000003692	chd6	74	76.946	Ictalurus_punctatus
ENSCLAG00000013743	CHD6	100	92.000	ENSSTOG00000013382	CHD6	100	92.000	Ictidomys_tridecemlineatus
ENSCLAG00000013743	CHD6	85	77.094	ENSLACG00000010881	CHD6	84	77.153	Latimeria_chalumnae
ENSCLAG00000013743	CHD6	72	80.380	ENSLOCG00000007386	chd6	84	76.147	Lepisosteus_oculatus
ENSCLAG00000013743	CHD6	100	90.169	ENSLAFG00000012144	CHD6	100	90.169	Loxodonta_africana
ENSCLAG00000013743	CHD6	100	91.419	ENSMFAG00000032830	CHD6	99	93.211	Macaca_fascicularis
ENSCLAG00000013743	CHD6	100	91.419	ENSMMUG00000020458	CHD6	99	93.211	Macaca_mulatta
ENSCLAG00000013743	CHD6	100	91.419	ENSMNEG00000040847	CHD6	99	93.211	Macaca_nemestrina
ENSCLAG00000013743	CHD6	99	91.311	ENSMLEG00000031965	CHD6	99	93.211	Mandrillus_leucophaeus
ENSCLAG00000013743	CHD6	76	73.614	ENSMAMG00000013111	chd6	65	73.835	Mastacembelus_armatus
ENSCLAG00000013743	CHD6	99	71.491	ENSMGAG00000001121	CHD6	100	71.895	Meleagris_gallopavo
ENSCLAG00000013743	CHD6	99	91.415	ENSMICG00000016641	CHD6	99	92.477	Microcebus_murinus
ENSCLAG00000013743	CHD6	89	80.181	ENSMODG00000000720	-	99	80.222	Monodelphis_domestica
ENSCLAG00000013743	CHD6	100	88.037	MGP_CAROLIEiJ_G0024604	Chd6	100	94.262	Mus_caroli
ENSCLAG00000013743	CHD6	100	88.294	ENSMUSG00000057133	Chd6	100	94.177	Mus_musculus
ENSCLAG00000013743	CHD6	100	88.220	MGP_PahariEiJ_G0026048	Chd6	100	94.599	Mus_pahari
ENSCLAG00000013743	CHD6	100	88.183	MGP_SPRETEiJ_G0025526	Chd6	100	94.262	Mus_spretus
ENSCLAG00000013743	CHD6	100	88.982	ENSMPUG00000017695	CHD6	100	89.019	Mustela_putorius_furo
ENSCLAG00000013743	CHD6	100	89.908	ENSMLUG00000016247	CHD6	100	89.945	Myotis_lucifugus
ENSCLAG00000013743	CHD6	78	73.238	ENSNBRG00000013839	chd6	79	73.190	Neolamprologus_brichardi
ENSCLAG00000013743	CHD6	100	89.593	ENSNLEG00000006496	CHD6	99	89.912	Nomascus_leucogenys
ENSCLAG00000013743	CHD6	100	86.679	ENSOPRG00000013376	-	100	86.679	Ochotona_princeps
ENSCLAG00000013743	CHD6	81	75.581	ENSONIG00000000393	chd6	83	75.581	Oreochromis_niloticus
ENSCLAG00000013743	CHD6	100	70.163	ENSOANG00000014347	CHD6	99	70.271	Ornithorhynchus_anatinus
ENSCLAG00000013743	CHD6	99	88.836	ENSOCUG00000012394	CHD6	100	88.836	Oryctolagus_cuniculus
ENSCLAG00000013743	CHD6	82	69.673	ENSORLG00020021891	chd6	95	85.772	Oryzias_latipes_hni
ENSCLAG00000013743	CHD6	99	89.775	ENSOGAG00000002427	CHD6	100	89.578	Otolemur_garnettii
ENSCLAG00000013743	CHD6	99	84.923	ENSOARG00000002597	CHD6	100	84.923	Ovis_aries
ENSCLAG00000013743	CHD6	100	90.275	ENSPPRG00000014756	CHD6	100	90.275	Panthera_pardus
ENSCLAG00000013743	CHD6	100	90.165	ENSPTIG00000011094	CHD6	100	90.165	Panthera_tigris_altaica
ENSCLAG00000013743	CHD6	100	91.602	ENSPTRG00000013504	CHD6	99	93.211	Pan_troglodytes
ENSCLAG00000013743	CHD6	100	91.309	ENSPANG00000025554	CHD6	99	93.028	Papio_anubis
ENSCLAG00000013743	CHD6	77	76.463	ENSPKIG00000005578	chd6	79	72.881	Paramormyrops_kingsleyae
ENSCLAG00000013743	CHD6	76	76.387	ENSPMGG00000014877	chd6	84	75.275	Periophthalmus_magnuspinnatus
ENSCLAG00000013743	CHD6	100	79.502	ENSPCIG00000028037	CHD6	100	80.015	Phascolarctos_cinereus
ENSCLAG00000013743	CHD6	77	71.322	ENSPLAG00000003128	chd6	70	70.838	Poecilia_latipinna
ENSCLAG00000013743	CHD6	72	73.999	ENSPREG00000022653	chd6	99	86.264	Poecilia_reticulata
ENSCLAG00000013743	CHD6	100	91.569	ENSPPYG00000011016	CHD6	100	91.569	Pongo_abelii
ENSCLAG00000013743	CHD6	99	91.367	ENSPCOG00000001089	CHD6	99	93.028	Propithecus_coquereli
ENSCLAG00000013743	CHD6	78	74.756	ENSPNYG00000022516	chd6	78	74.725	Pundamilia_nyererei
ENSCLAG00000013743	CHD6	81	70.911	ENSPNAG00000012825	chd6	78	71.170	Pygocentrus_nattereri
ENSCLAG00000013743	CHD6	100	87.780	ENSRNOG00000016744	Chd6	100	87.596	Rattus_norvegicus
ENSCLAG00000013743	CHD6	100	90.942	ENSSBOG00000022089	CHD6	99	93.211	Saimiri_boliviensis_boliviensis
ENSCLAG00000013743	CHD6	100	79.026	ENSSHAG00000017072	CHD6	100	79.539	Sarcophilus_harrisii
ENSCLAG00000013743	CHD6	78	76.252	ENSSFOG00015012920	chd6	80	72.965	Scleropages_formosus
ENSCLAG00000013743	CHD6	58	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSCLAG00000013743	CHD6	100	89.288	ENSSSCG00000007360	CHD6	100	89.288	Sus_scrofa
ENSCLAG00000013743	CHD6	96	73.533	ENSTGUG00000003179	CHD6	99	73.946	Taeniopygia_guttata
ENSCLAG00000013743	CHD6	75	77.373	ENSTNIG00000017487	chd6	92	72.614	Tetraodon_nigroviridis
ENSCLAG00000013743	CHD6	100	86.987	ENSTTRG00000013438	CHD6	100	86.987	Tursiops_truncatus
ENSCLAG00000013743	CHD6	99	89.130	ENSUAMG00000024036	CHD6	95	95.946	Ursus_americanus
ENSCLAG00000013743	CHD6	99	90.527	ENSUMAG00000002017	CHD6	95	95.946	Ursus_maritimus
ENSCLAG00000013743	CHD6	94	89.117	ENSVPAG00000007941	CHD6	93	89.904	Vicugna_pacos
ENSCLAG00000013743	CHD6	100	90.239	ENSVVUG00000029164	CHD6	100	90.239	Vulpes_vulpes
ENSCLAG00000013743	CHD6	99	60.211	ENSXETG00000021445	chd6	99	60.000	Xenopus_tropicalis