EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000013859 (Gene tree)
Gene ID: 102021756
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 13705 bases
Position: chrJH721875.1:28158351-28172055
Accession: 102021756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000020230	HAT	PF02184.16	2.9e-40	1	2
ENSCLAP00000020230	HAT	PF02184.16	2.9e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000020426	CRNKL1-201	2941	XM_005380946	ENSCLAP00000020230	687 (aa)	XP_005381003	UPI00038F0B5F

Gene Model

Click here to download ENSCLAG00000013859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013859's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013859	CRNKL1	100	95.924	ENSG00000101343	CRNKL1	100	95.924	Homo_sapiens
ENSCLAG00000013859	CRNKL1	99	86.131	ENSAPOG00000009705	crnkl1	97	86.074	Acanthochromis_polyacanthus
ENSCLAG00000013859	CRNKL1	100	97.234	ENSAMEG00000000270	CRNKL1	83	97.234	Ailuropoda_melanoleuca
ENSCLAG00000013859	CRNKL1	97	87.087	ENSACIG00000015267	crnkl1	89	87.087	Amphilophus_citrinellus
ENSCLAG00000013859	CRNKL1	99	86.277	ENSAOCG00000021964	crnkl1	91	86.277	Amphiprion_ocellaris
ENSCLAG00000013859	CRNKL1	99	86.131	ENSAPEG00000015041	crnkl1	91	86.131	Amphiprion_percula
ENSCLAG00000013859	CRNKL1	99	85.882	ENSATEG00000001068	crnkl1	89	85.882	Anabas_testudineus
ENSCLAG00000013859	CRNKL1	99	90.102	ENSAPLG00000013105	CRNKL1	99	90.102	Anas_platyrhynchos
ENSCLAG00000013859	CRNKL1	99	92.533	ENSACAG00000005284	CRNKL1	99	92.533	Anolis_carolinensis
ENSCLAG00000013859	CRNKL1	92	96.361	ENSANAG00000024889	CRNKL1	100	96.361	Aotus_nancymaae
ENSCLAG00000013859	CRNKL1	99	87.297	ENSACLG00000010813	crnkl1	90	87.297	Astatotilapia_calliptera
ENSCLAG00000013859	CRNKL1	97	87.048	ENSAMXG00000018334	crnkl1	92	85.109	Astyanax_mexicanus
ENSCLAG00000013859	CRNKL1	100	96.215	ENSBTAG00000008472	CRNKL1	99	96.215	Bos_taurus
ENSCLAG00000013859	CRNKL1	93	62.830	WBGene00019762	M03F8.3	91	62.059	Caenorhabditis_elegans
ENSCLAG00000013859	CRNKL1	100	95.779	ENSCJAG00000005393	CRNKL1	100	95.779	Callithrix_jacchus
ENSCLAG00000013859	CRNKL1	100	96.943	ENSCAFG00000005333	CRNKL1	94	96.943	Canis_familiaris
ENSCLAG00000013859	CRNKL1	100	96.943	ENSCAFG00020027488	CRNKL1	100	96.943	Canis_lupus_dingo
ENSCLAG00000013859	CRNKL1	100	95.342	ENSCHIG00000013171	CRNKL1	99	95.342	Capra_hircus
ENSCLAG00000013859	CRNKL1	100	96.215	ENSTSYG00000004197	CRNKL1	100	96.215	Carlito_syrichta
ENSCLAG00000013859	CRNKL1	95	98.384	ENSCAPG00000010501	CRNKL1	99	98.384	Cavia_aperea
ENSCLAG00000013859	CRNKL1	100	98.399	ENSCPOG00000004418	CRNKL1	100	98.399	Cavia_porcellus
ENSCLAG00000013859	CRNKL1	100	95.779	ENSCCAG00000027037	CRNKL1	100	95.779	Cebus_capucinus
ENSCLAG00000013859	CRNKL1	100	95.924	ENSCATG00000034247	CRNKL1	100	95.924	Cercocebus_atys
ENSCLAG00000013859	CRNKL1	100	95.924	ENSCSAG00000011434	CRNKL1	100	95.924	Chlorocebus_sabaeus
ENSCLAG00000013859	CRNKL1	100	96.652	ENSCHOG00000006371	CRNKL1	84	96.652	Choloepus_hoffmanni
ENSCLAG00000013859	CRNKL1	99	93.577	ENSCPBG00000023501	CRNKL1	99	93.577	Chrysemys_picta_bellii
ENSCLAG00000013859	CRNKL1	96	69.486	ENSCING00000002709	-	99	67.836	Ciona_intestinalis
ENSCLAG00000013859	CRNKL1	100	96.070	ENSCANG00000038789	CRNKL1	100	96.070	Colobus_angolensis_palliatus
ENSCLAG00000013859	CRNKL1	100	97.962	ENSCGRG00001000687	-	99	97.962	Cricetulus_griseus_chok1gshd
ENSCLAG00000013859	CRNKL1	100	97.962	ENSCGRG00001001115	-	99	97.962	Cricetulus_griseus_chok1gshd
ENSCLAG00000013859	CRNKL1	100	97.962	ENSCGRG00000007854	Crnkl1	99	97.962	Cricetulus_griseus_crigri
ENSCLAG00000013859	CRNKL1	98	86.222	ENSCSEG00000005594	crnkl1	86	86.222	Cynoglossus_semilaevis
ENSCLAG00000013859	CRNKL1	97	87.387	ENSCVAG00000015172	crnkl1	92	85.401	Cyprinodon_variegatus
ENSCLAG00000013859	CRNKL1	96	86.556	ENSDARG00000007901	crnkl1	90	85.234	Danio_rerio
ENSCLAG00000013859	CRNKL1	99	97.222	ENSDNOG00000016226	CRNKL1	95	97.222	Dasypus_novemcinctus
ENSCLAG00000013859	CRNKL1	97	87.612	ENSDORG00000030174	-	99	87.612	Dipodomys_ordii
ENSCLAG00000013859	CRNKL1	97	88.060	ENSDORG00000023724	-	99	88.060	Dipodomys_ordii
ENSCLAG00000013859	CRNKL1	100	96.248	ENSDORG00000000394	-	100	96.248	Dipodomys_ordii
ENSCLAG00000013859	CRNKL1	97	69.083	FBgn0000377	crn	96	69.083	Drosophila_melanogaster
ENSCLAG00000013859	CRNKL1	100	84.134	ENSETEG00000003711	CRNKL1	84	84.134	Echinops_telfairi
ENSCLAG00000013859	CRNKL1	99	60.757	ENSEBUG00000013461	crnkl1	96	56.223	Eptatretus_burgeri
ENSCLAG00000013859	CRNKL1	100	96.943	ENSEASG00005002072	CRNKL1	100	96.943	Equus_asinus_asinus
ENSCLAG00000013859	CRNKL1	100	96.943	ENSECAG00000022215	CRNKL1	100	96.943	Equus_caballus
ENSCLAG00000013859	CRNKL1	99	94.118	ENSEEUG00000000413	CRNKL1	92	94.178	Erinaceus_europaeus
ENSCLAG00000013859	CRNKL1	98	84.776	ENSELUG00000015424	crnkl1	97	83.697	Esox_lucius
ENSCLAG00000013859	CRNKL1	100	97.234	ENSFCAG00000000714	CRNKL1	100	97.234	Felis_catus
ENSCLAG00000013859	CRNKL1	98	91.220	ENSFALG00000004611	CRNKL1	100	91.220	Ficedula_albicollis
ENSCLAG00000013859	CRNKL1	100	99.127	ENSFDAG00000000604	CRNKL1	100	99.127	Fukomys_damarensis
ENSCLAG00000013859	CRNKL1	98	86.330	ENSFHEG00000013163	crnkl1	88	86.330	Fundulus_heteroclitus
ENSCLAG00000013859	CRNKL1	97	85.329	ENSGMOG00000007609	crnkl1	94	83.819	Gadus_morhua
ENSCLAG00000013859	CRNKL1	99	93.139	ENSGALG00000008429	CRNKL1	99	93.139	Gallus_gallus
ENSCLAG00000013859	CRNKL1	97	86.486	ENSGAFG00000014249	crnkl1	90	84.818	Gambusia_affinis
ENSCLAG00000013859	CRNKL1	99	84.357	ENSGACG00000011852	crnkl1	91	84.357	Gasterosteus_aculeatus
ENSCLAG00000013859	CRNKL1	95	92.530	ENSGAGG00000021233	CRNKL1	100	92.730	Gopherus_agassizii
ENSCLAG00000013859	CRNKL1	100	95.924	ENSGGOG00000014176	CRNKL1	100	95.924	Gorilla_gorilla
ENSCLAG00000013859	CRNKL1	99	87.149	ENSHBUG00000005246	crnkl1	90	87.149	Haplochromis_burtoni
ENSCLAG00000013859	CRNKL1	100	98.981	ENSHGLG00000010856	CRNKL1	100	98.981	Heterocephalus_glaber_female
ENSCLAG00000013859	CRNKL1	100	98.981	ENSHGLG00100011521	CRNKL1	100	98.981	Heterocephalus_glaber_male
ENSCLAG00000013859	CRNKL1	97	84.258	ENSHCOG00000006420	crnkl1	98	82.845	Hippocampus_comes
ENSCLAG00000013859	CRNKL1	97	75.338	ENSIPUG00000006836	-	99	74.556	Ictalurus_punctatus
ENSCLAG00000013859	CRNKL1	93	68.132	ENSIPUG00000000315	-	100	69.340	Ictalurus_punctatus
ENSCLAG00000013859	CRNKL1	94	87.057	ENSIPUG00000006751	crnkl1	93	85.224	Ictalurus_punctatus
ENSCLAG00000013859	CRNKL1	100	98.399	ENSSTOG00000014747	CRNKL1	100	98.399	Ictidomys_tridecemlineatus
ENSCLAG00000013859	CRNKL1	100	95.733	ENSJJAG00000016926	Crnkl1	100	95.733	Jaculus_jaculus
ENSCLAG00000013859	CRNKL1	99	86.217	ENSKMAG00000003620	crnkl1	86	86.217	Kryptolebias_marmoratus
ENSCLAG00000013859	CRNKL1	97	70.877	ENSLBEG00000003543	crnkl1	92	72.661	Labrus_bergylta
ENSCLAG00000013859	CRNKL1	99	88.141	ENSLACG00000001129	CRNKL1	99	88.141	Latimeria_chalumnae
ENSCLAG00000013859	CRNKL1	97	88.855	ENSLOCG00000016889	crnkl1	95	87.427	Lepisosteus_oculatus
ENSCLAG00000013859	CRNKL1	100	96.657	ENSLAFG00000004512	CRNKL1	100	96.657	Loxodonta_africana
ENSCLAG00000013859	CRNKL1	100	95.924	ENSMFAG00000039893	CRNKL1	100	95.924	Macaca_fascicularis
ENSCLAG00000013859	CRNKL1	100	95.924	ENSMMUG00000007709	CRNKL1	100	95.924	Macaca_mulatta
ENSCLAG00000013859	CRNKL1	100	95.924	ENSMNEG00000037490	CRNKL1	100	95.924	Macaca_nemestrina
ENSCLAG00000013859	CRNKL1	100	95.924	ENSMLEG00000034885	CRNKL1	100	95.924	Mandrillus_leucophaeus
ENSCLAG00000013859	CRNKL1	99	85.693	ENSMAMG00000008757	crnkl1	90	85.693	Mastacembelus_armatus
ENSCLAG00000013859	CRNKL1	99	87.297	ENSMZEG00005022345	crnkl1	90	87.297	Maylandia_zebra
ENSCLAG00000013859	CRNKL1	99	92.420	ENSMGAG00000003452	CRNKL1	94	92.420	Meleagris_gallopavo
ENSCLAG00000013859	CRNKL1	100	97.817	ENSMAUG00000020764	Crnkl1	99	97.817	Mesocricetus_auratus
ENSCLAG00000013859	CRNKL1	100	96.652	ENSMICG00000006048	CRNKL1	100	96.652	Microcebus_murinus
ENSCLAG00000013859	CRNKL1	100	89.557	ENSMOCG00000000681	-	99	89.557	Microtus_ochrogaster
ENSCLAG00000013859	CRNKL1	97	69.219	ENSMOCG00000004179	-	96	69.436	Microtus_ochrogaster
ENSCLAG00000013859	CRNKL1	92	84.945	ENSMMOG00000017601	crnkl1	97	84.945	Mola_mola
ENSCLAG00000013859	CRNKL1	100	85.735	ENSMODG00000010857	-	99	85.735	Monodelphis_domestica
ENSCLAG00000013859	CRNKL1	100	91.236	ENSMODG00000005961	-	99	91.236	Monodelphis_domestica
ENSCLAG00000013859	CRNKL1	98	62.619	ENSMALG00000011211	crnkl1	88	68.694	Monopterus_albus
ENSCLAG00000013859	CRNKL1	100	97.525	MGP_CAROLIEiJ_G0024394	Crnkl1	99	97.525	Mus_caroli
ENSCLAG00000013859	CRNKL1	100	97.671	ENSMUSG00000001767	Crnkl1	99	97.671	Mus_musculus
ENSCLAG00000013859	CRNKL1	100	96.070	MGP_PahariEiJ_G0025838	Crnkl1	99	96.070	Mus_pahari
ENSCLAG00000013859	CRNKL1	100	97.525	MGP_SPRETEiJ_G0025312	Crnkl1	99	97.525	Mus_spretus
ENSCLAG00000013859	CRNKL1	100	97.089	ENSMPUG00000001226	CRNKL1	100	97.089	Mustela_putorius_furo
ENSCLAG00000013859	CRNKL1	100	96.512	ENSMLUG00000016513	CRNKL1	89	96.512	Myotis_lucifugus
ENSCLAG00000013859	CRNKL1	100	95.571	ENSNGAG00000023097	Crnkl1	100	95.571	Nannospalax_galili
ENSCLAG00000013859	CRNKL1	99	87.445	ENSNBRG00000007867	crnkl1	89	87.445	Neolamprologus_brichardi
ENSCLAG00000013859	CRNKL1	100	92.431	ENSNLEG00000009862	CRNKL1	100	92.431	Nomascus_leucogenys
ENSCLAG00000013859	CRNKL1	100	85.174	ENSMEUG00000002361	-	99	85.174	Notamacropus_eugenii
ENSCLAG00000013859	CRNKL1	98	94.179	ENSMEUG00000012167	-	100	94.179	Notamacropus_eugenii
ENSCLAG00000013859	CRNKL1	75	66.988	ENSOPRG00000009242	-	61	66.988	Ochotona_princeps
ENSCLAG00000013859	CRNKL1	100	99.272	ENSODEG00000012175	CRNKL1	100	99.272	Octodon_degus
ENSCLAG00000013859	CRNKL1	99	87.740	ENSONIG00000018728	crnkl1	89	87.740	Oreochromis_niloticus
ENSCLAG00000013859	CRNKL1	99	96.939	ENSOCUG00000015484	CRNKL1	83	96.939	Oryctolagus_cuniculus
ENSCLAG00000013859	CRNKL1	99	83.212	ENSORLG00000017240	crnkl1	96	79.855	Oryzias_latipes
ENSCLAG00000013859	CRNKL1	97	85.285	ENSORLG00020001742	crnkl1	89	85.285	Oryzias_latipes_hni
ENSCLAG00000013859	CRNKL1	99	83.358	ENSORLG00015019564	crnkl1	89	85.285	Oryzias_latipes_hsok
ENSCLAG00000013859	CRNKL1	99	84.380	ENSOMEG00000019895	crnkl1	91	84.380	Oryzias_melastigma
ENSCLAG00000013859	CRNKL1	100	96.215	ENSOGAG00000011544	CRNKL1	100	96.215	Otolemur_garnettii
ENSCLAG00000013859	CRNKL1	99	96.471	ENSOARG00000002150	CRNKL1	89	96.507	Ovis_aries
ENSCLAG00000013859	CRNKL1	99	94.559	ENSPPAG00000027847	CRNKL1	83	94.614	Pan_paniscus
ENSCLAG00000013859	CRNKL1	100	97.234	ENSPPRG00000001955	CRNKL1	100	97.234	Panthera_pardus
ENSCLAG00000013859	CRNKL1	100	97.234	ENSPTIG00000007393	CRNKL1	100	97.234	Panthera_tigris_altaica
ENSCLAG00000013859	CRNKL1	100	95.779	ENSPTRG00000030609	CRNKL1	100	95.779	Pan_troglodytes
ENSCLAG00000013859	CRNKL1	100	95.924	ENSPANG00000017420	CRNKL1	100	95.924	Papio_anubis
ENSCLAG00000013859	CRNKL1	96	82.406	ENSPKIG00000017093	crnkl1	89	81.672	Paramormyrops_kingsleyae
ENSCLAG00000013859	CRNKL1	99	92.387	ENSPSIG00000012705	CRNKL1	99	92.387	Pelodiscus_sinensis
ENSCLAG00000013859	CRNKL1	99	79.619	ENSPMGG00000006263	crnkl1	96	79.087	Periophthalmus_magnuspinnatus
ENSCLAG00000013859	CRNKL1	100	97.817	ENSPEMG00000000073	-	99	97.817	Peromyscus_maniculatus_bairdii
ENSCLAG00000013859	CRNKL1	99	82.122	ENSPMAG00000002250	crnkl1	99	82.122	Petromyzon_marinus
ENSCLAG00000013859	CRNKL1	100	93.595	ENSPCIG00000025825	CRNKL1	96	93.595	Phascolarctos_cinereus
ENSCLAG00000013859	CRNKL1	97	86.336	ENSPFOG00000005102	crnkl1	93	84.448	Poecilia_formosa
ENSCLAG00000013859	CRNKL1	97	86.336	ENSPLAG00000007288	crnkl1	90	84.325	Poecilia_latipinna
ENSCLAG00000013859	CRNKL1	97	86.486	ENSPMEG00000008865	crnkl1	93	84.593	Poecilia_mexicana
ENSCLAG00000013859	CRNKL1	97	86.036	ENSPREG00000012615	crnkl1	92	84.211	Poecilia_reticulata
ENSCLAG00000013859	CRNKL1	99	95.882	ENSPPYG00000010747	CRNKL1	81	95.924	Pongo_abelii
ENSCLAG00000013859	CRNKL1	99	90.882	ENSPCAG00000003296	CRNKL1	85	90.975	Procavia_capensis
ENSCLAG00000013859	CRNKL1	99	95.294	ENSPCOG00000017608	CRNKL1	83	95.342	Propithecus_coquereli
ENSCLAG00000013859	CRNKL1	100	96.943	ENSPVAG00000006207	CRNKL1	83	96.943	Pteropus_vampyrus
ENSCLAG00000013859	CRNKL1	99	87.149	ENSPNYG00000001977	crnkl1	90	87.149	Pundamilia_nyererei
ENSCLAG00000013859	CRNKL1	98	87.910	ENSPNAG00000001507	crnkl1	98	83.261	Pygocentrus_nattereri
ENSCLAG00000013859	CRNKL1	100	97.234	ENSRNOG00000040045	Crnkl1	99	97.234	Rattus_norvegicus
ENSCLAG00000013859	CRNKL1	100	97.671	ENSRNOG00000010587	Crnkl1	99	97.671	Rattus_norvegicus
ENSCLAG00000013859	CRNKL1	100	95.779	ENSRBIG00000031770	CRNKL1	100	95.779	Rhinopithecus_bieti
ENSCLAG00000013859	CRNKL1	100	95.633	ENSRROG00000040450	CRNKL1	100	95.633	Rhinopithecus_roxellana
ENSCLAG00000013859	CRNKL1	94	37.736	YLR117C	CLF1	99	37.826	Saccharomyces_cerevisiae
ENSCLAG00000013859	CRNKL1	100	95.779	ENSSBOG00000029672	CRNKL1	100	95.779	Saimiri_boliviensis_boliviensis
ENSCLAG00000013859	CRNKL1	96	73.900	ENSSHAG00000011199	CRNKL1	99	73.900	Sarcophilus_harrisii
ENSCLAG00000013859	CRNKL1	96	87.160	ENSSFOG00015000946	crnkl1	89	85.526	Scleropages_formosus
ENSCLAG00000013859	CRNKL1	99	84.334	ENSSMAG00000007933	crnkl1	87	85.544	Scophthalmus_maximus
ENSCLAG00000013859	CRNKL1	99	80.265	ENSSDUG00000012625	crnkl1	87	80.265	Seriola_dumerili
ENSCLAG00000013859	CRNKL1	99	86.873	ENSSLDG00000021413	crnkl1	88	86.873	Seriola_lalandi_dorsalis
ENSCLAG00000013859	CRNKL1	100	95.779	ENSSARG00000006443	CRNKL1	82	95.779	Sorex_araneus
ENSCLAG00000013859	CRNKL1	99	92.094	ENSSPUG00000005254	CRNKL1	99	92.094	Sphenodon_punctatus
ENSCLAG00000013859	CRNKL1	97	87.688	ENSSPAG00000016150	crnkl1	86	87.688	Stegastes_partitus
ENSCLAG00000013859	CRNKL1	100	96.943	ENSSSCG00000038587	CRNKL1	99	96.943	Sus_scrofa
ENSCLAG00000013859	CRNKL1	99	91.545	ENSTGUG00000007645	CRNKL1	98	91.545	Taeniopygia_guttata
ENSCLAG00000013859	CRNKL1	98	80.149	ENSTRUG00000015417	crnkl1	90	79.381	Takifugu_rubripes
ENSCLAG00000013859	CRNKL1	97	84.558	ENSTNIG00000010710	crnkl1	99	83.090	Tetraodon_nigroviridis
ENSCLAG00000013859	CRNKL1	91	95.200	ENSTBEG00000001304	CRNKL1	82	95.253	Tupaia_belangeri
ENSCLAG00000013859	CRNKL1	91	92.640	ENSTTRG00000000484	CRNKL1	81	92.722	Tursiops_truncatus
ENSCLAG00000013859	CRNKL1	100	97.234	ENSUAMG00000018586	CRNKL1	100	97.234	Ursus_americanus
ENSCLAG00000013859	CRNKL1	100	97.234	ENSUMAG00000024957	CRNKL1	100	97.234	Ursus_maritimus
ENSCLAG00000013859	CRNKL1	100	96.943	ENSVVUG00000012559	CRNKL1	82	96.943	Vulpes_vulpes
ENSCLAG00000013859	CRNKL1	99	89.956	ENSXETG00000009698	crnkl1	99	89.956	Xenopus_tropicalis
ENSCLAG00000013859	CRNKL1	97	85.607	ENSXCOG00000000824	crnkl1	91	83.895	Xiphophorus_couchianus
ENSCLAG00000013859	CRNKL1	97	86.486	ENSXMAG00000006896	crnkl1	91	84.751	Xiphophorus_maculatus