EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000013966 (Gene tree)
Gene ID: 102014183
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 6740 bases
Position: chrJH721902.1:16423526-16430265
Accession: 102014183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000020385	PseudoU_synth_2	PF00849.22	7.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000020582	RPUSD1-201	5701	XM_005391598	ENSCLAP00000020385	306 (aa)	XP_005391655	UPI00038ECECA

Gene Model

Click here to download ENSCLAG00000013966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000013966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000013966	RPUSD1	100	81.731	ENSG00000007376	RPUSD1	100	87.500	Homo_sapiens
ENSCLAG00000013966	RPUSD1	98	55.629	ENSAPOG00000022221	rpusd1	98	55.629	Acanthochromis_polyacanthus
ENSCLAG00000013966	RPUSD1	100	81.699	ENSAMEG00000007461	RPUSD1	100	81.373	Ailuropoda_melanoleuca
ENSCLAG00000013966	RPUSD1	93	61.246	ENSACIG00000015863	rpusd1	98	57.516	Amphilophus_citrinellus
ENSCLAG00000013966	RPUSD1	83	64.427	ENSAOCG00000021975	rpusd1	95	56.066	Amphiprion_ocellaris
ENSCLAG00000013966	RPUSD1	83	64.032	ENSAPEG00000001316	rpusd1	95	55.738	Amphiprion_percula
ENSCLAG00000013966	RPUSD1	83	64.822	ENSATEG00000002984	rpusd1	98	57.049	Anabas_testudineus
ENSCLAG00000013966	RPUSD1	78	58.065	ENSAPLG00000012316	RPUSD1	100	57.490	Anas_platyrhynchos
ENSCLAG00000013966	RPUSD1	99	68.525	ENSACAG00000008953	RPUSD1	100	68.197	Anolis_carolinensis
ENSCLAG00000013966	RPUSD1	100	83.333	ENSANAG00000024709	RPUSD1	100	83.333	Aotus_nancymaae
ENSCLAG00000013966	RPUSD1	83	66.008	ENSACLG00000013692	rpusd1	98	57.655	Astatotilapia_calliptera
ENSCLAG00000013966	RPUSD1	99	58.086	ENSAMXG00000019802	rpusd1	100	58.086	Astyanax_mexicanus
ENSCLAG00000013966	RPUSD1	100	85.390	ENSBTAG00000000179	RPUSD1	100	85.390	Bos_taurus
ENSCLAG00000013966	RPUSD1	100	83.333	ENSCJAG00000012253	RPUSD1	100	83.013	Callithrix_jacchus
ENSCLAG00000013966	RPUSD1	100	82.353	ENSCAFG00000019614	RPUSD1	100	83.007	Canis_familiaris
ENSCLAG00000013966	RPUSD1	100	82.353	ENSCAFG00020008891	RPUSD1	100	83.007	Canis_lupus_dingo
ENSCLAG00000013966	RPUSD1	100	84.416	ENSCHIG00000012872	RPUSD1	100	84.416	Capra_hircus
ENSCLAG00000013966	RPUSD1	100	85.294	ENSTSYG00000036934	RPUSD1	100	84.967	Carlito_syrichta
ENSCLAG00000013966	RPUSD1	100	96.405	ENSCAPG00000014219	RPUSD1	100	96.405	Cavia_aperea
ENSCLAG00000013966	RPUSD1	100	96.405	ENSCPOG00000034604	RPUSD1	100	96.405	Cavia_porcellus
ENSCLAG00000013966	RPUSD1	100	83.974	ENSCCAG00000034385	RPUSD1	100	83.654	Cebus_capucinus
ENSCLAG00000013966	RPUSD1	100	83.013	ENSCATG00000042983	RPUSD1	100	82.692	Cercocebus_atys
ENSCLAG00000013966	RPUSD1	100	83.654	ENSCSAG00000012121	RPUSD1	100	83.333	Chlorocebus_sabaeus
ENSCLAG00000013966	RPUSD1	99	64.286	ENSCPBG00000021101	RPUSD1	99	64.194	Chrysemys_picta_bellii
ENSCLAG00000013966	RPUSD1	92	86.786	ENSCANG00000028576	RPUSD1	98	86.861	Colobus_angolensis_palliatus
ENSCLAG00000013966	RPUSD1	100	84.967	ENSCGRG00001014253	Rpusd1	100	84.641	Cricetulus_griseus_chok1gshd
ENSCLAG00000013966	RPUSD1	100	84.967	ENSCGRG00000017995	Rpusd1	100	84.641	Cricetulus_griseus_crigri
ENSCLAG00000013966	RPUSD1	99	56.066	ENSCSEG00000018512	rpusd1	100	56.066	Cynoglossus_semilaevis
ENSCLAG00000013966	RPUSD1	98	54.575	ENSCVAG00000022746	rpusd1	98	55.667	Cyprinodon_variegatus
ENSCLAG00000013966	RPUSD1	99	60.855	ENSDARG00000060192	rpusd1	100	60.855	Danio_rerio
ENSCLAG00000013966	RPUSD1	100	80.195	ENSDNOG00000003721	RPUSD1	100	77.116	Dasypus_novemcinctus
ENSCLAG00000013966	RPUSD1	100	86.601	ENSDORG00000026656	Rpusd1	100	87.582	Dipodomys_ordii
ENSCLAG00000013966	RPUSD1	99	46.708	ENSEBUG00000008767	rpusd1	94	46.708	Eptatretus_burgeri
ENSCLAG00000013966	RPUSD1	100	83.228	ENSEASG00005018421	RPUSD1	76	83.544	Equus_asinus_asinus
ENSCLAG00000013966	RPUSD1	98	53.770	ENSELUG00000014307	rpusd1	88	54.426	Esox_lucius
ENSCLAG00000013966	RPUSD1	100	82.680	ENSFCAG00000010359	RPUSD1	100	82.680	Felis_catus
ENSCLAG00000013966	RPUSD1	99	65.902	ENSFALG00000003211	RPUSD1	100	65.574	Ficedula_albicollis
ENSCLAG00000013966	RPUSD1	100	96.405	ENSFDAG00000013398	RPUSD1	100	96.405	Fukomys_damarensis
ENSCLAG00000013966	RPUSD1	83	62.451	ENSFHEG00000004736	rpusd1	98	54.785	Fundulus_heteroclitus
ENSCLAG00000013966	RPUSD1	83	63.241	ENSGMOG00000010756	rpusd1	98	55.592	Gadus_morhua
ENSCLAG00000013966	RPUSD1	99	64.286	ENSGALG00000005315	RPUSD1	100	63.961	Gallus_gallus
ENSCLAG00000013966	RPUSD1	98	56.106	ENSGAFG00000009886	rpusd1	98	56.000	Gambusia_affinis
ENSCLAG00000013966	RPUSD1	82	64.143	ENSGACG00000014276	rpusd1	81	64.143	Gasterosteus_aculeatus
ENSCLAG00000013966	RPUSD1	99	63.844	ENSGAGG00000004181	RPUSD1	99	62.903	Gopherus_agassizii
ENSCLAG00000013966	RPUSD1	100	81.410	ENSGGOG00000013997	RPUSD1	100	81.090	Gorilla_gorilla
ENSCLAG00000013966	RPUSD1	83	65.613	ENSHBUG00000023728	rpusd1	98	57.329	Haplochromis_burtoni
ENSCLAG00000013966	RPUSD1	100	96.405	ENSHGLG00000002595	RPUSD1	100	96.405	Heterocephalus_glaber_female
ENSCLAG00000013966	RPUSD1	100	96.405	ENSHGLG00100014303	RPUSD1	100	96.405	Heterocephalus_glaber_male
ENSCLAG00000013966	RPUSD1	98	58.472	ENSHCOG00000002390	rpusd1	99	58.472	Hippocampus_comes
ENSCLAG00000013966	RPUSD1	99	60.197	ENSIPUG00000001570	rpusd1	99	60.197	Ictalurus_punctatus
ENSCLAG00000013966	RPUSD1	100	89.542	ENSSTOG00000004276	RPUSD1	100	89.542	Ictidomys_tridecemlineatus
ENSCLAG00000013966	RPUSD1	100	88.235	ENSJJAG00000015696	Rpusd1	100	88.235	Jaculus_jaculus
ENSCLAG00000013966	RPUSD1	83	62.451	ENSKMAG00000017287	rpusd1	98	54.902	Kryptolebias_marmoratus
ENSCLAG00000013966	RPUSD1	83	64.427	ENSLBEG00000013354	RPUSD1	98	56.393	Labrus_bergylta
ENSCLAG00000013966	RPUSD1	83	64.427	ENSLBEG00000022502	rpusd1	98	56.393	Labrus_bergylta
ENSCLAG00000013966	RPUSD1	99	60.656	ENSLACG00000008869	RPUSD1	99	60.927	Latimeria_chalumnae
ENSCLAG00000013966	RPUSD1	71	73.148	ENSLOCG00000005682	rpusd1	99	73.148	Lepisosteus_oculatus
ENSCLAG00000013966	RPUSD1	100	79.739	ENSLAFG00000002115	RPUSD1	100	79.739	Loxodonta_africana
ENSCLAG00000013966	RPUSD1	100	83.333	ENSMFAG00000003961	RPUSD1	100	83.013	Macaca_fascicularis
ENSCLAG00000013966	RPUSD1	100	83.333	ENSMMUG00000000842	RPUSD1	100	83.013	Macaca_mulatta
ENSCLAG00000013966	RPUSD1	100	83.333	ENSMNEG00000042712	RPUSD1	100	83.013	Macaca_nemestrina
ENSCLAG00000013966	RPUSD1	100	83.333	ENSMLEG00000030591	RPUSD1	100	83.013	Mandrillus_leucophaeus
ENSCLAG00000013966	RPUSD1	83	64.822	ENSMAMG00000004735	rpusd1	98	57.190	Mastacembelus_armatus
ENSCLAG00000013966	RPUSD1	83	66.008	ENSMZEG00005003214	rpusd1	98	57.655	Maylandia_zebra
ENSCLAG00000013966	RPUSD1	97	63.518	ENSMGAG00000005447	RPUSD1	99	63.787	Meleagris_gallopavo
ENSCLAG00000013966	RPUSD1	86	80.916	ENSMAUG00000019998	Rpusd1	100	80.916	Mesocricetus_auratus
ENSCLAG00000013966	RPUSD1	100	85.342	ENSMICG00000017561	RPUSD1	100	84.887	Microcebus_murinus
ENSCLAG00000013966	RPUSD1	100	87.255	ENSMOCG00000014082	Rpusd1	100	87.255	Microtus_ochrogaster
ENSCLAG00000013966	RPUSD1	80	65.714	ENSMMOG00000012569	rpusd1	90	65.714	Mola_mola
ENSCLAG00000013966	RPUSD1	100	68.387	ENSMODG00000016882	RPUSD1	100	68.387	Monodelphis_domestica
ENSCLAG00000013966	RPUSD1	83	65.217	ENSMALG00000017818	rpusd1	81	65.217	Monopterus_albus
ENSCLAG00000013966	RPUSD1	100	87.255	MGP_CAROLIEiJ_G0021244	Rpusd1	100	87.255	Mus_caroli
ENSCLAG00000013966	RPUSD1	100	87.255	ENSMUSG00000041199	Rpusd1	100	87.255	Mus_musculus
ENSCLAG00000013966	RPUSD1	100	85.714	MGP_PahariEiJ_G0023562	Rpusd1	100	85.714	Mus_pahari
ENSCLAG00000013966	RPUSD1	100	87.255	MGP_SPRETEiJ_G0022155	Rpusd1	100	87.255	Mus_spretus
ENSCLAG00000013966	RPUSD1	100	82.353	ENSMPUG00000015897	RPUSD1	100	82.680	Mustela_putorius_furo
ENSCLAG00000013966	RPUSD1	100	85.577	ENSMLUG00000001089	RPUSD1	100	86.218	Myotis_lucifugus
ENSCLAG00000013966	RPUSD1	100	87.908	ENSNGAG00000003595	Rpusd1	100	87.908	Nannospalax_galili
ENSCLAG00000013966	RPUSD1	81	65.587	ENSNBRG00000006457	rpusd1	98	57.525	Neolamprologus_brichardi
ENSCLAG00000013966	RPUSD1	55	77.143	ENSNLEG00000008424	-	100	76.571	Nomascus_leucogenys
ENSCLAG00000013966	RPUSD1	100	68.489	ENSMEUG00000016049	RPUSD1	100	68.182	Notamacropus_eugenii
ENSCLAG00000013966	RPUSD1	99	78.289	ENSOPRG00000008340	RPUSD1	99	77.632	Ochotona_princeps
ENSCLAG00000013966	RPUSD1	100	96.078	ENSODEG00000016945	RPUSD1	100	96.078	Octodon_degus
ENSCLAG00000013966	RPUSD1	83	64.427	ENSONIG00000015672	rpusd1	99	56.352	Oreochromis_niloticus
ENSCLAG00000013966	RPUSD1	99	57.003	ENSORLG00000013009	rpusd1	99	57.285	Oryzias_latipes
ENSCLAG00000013966	RPUSD1	99	56.954	ENSORLG00020010382	rpusd1	99	56.954	Oryzias_latipes_hni
ENSCLAG00000013966	RPUSD1	99	56.026	ENSORLG00015021354	rpusd1	99	56.291	Oryzias_latipes_hsok
ENSCLAG00000013966	RPUSD1	98	57.525	ENSOMEG00000021426	rpusd1	98	57.525	Oryzias_melastigma
ENSCLAG00000013966	RPUSD1	100	87.179	ENSOGAG00000003795	RPUSD1	100	87.179	Otolemur_garnettii
ENSCLAG00000013966	RPUSD1	100	84.416	ENSOARG00000014254	RPUSD1	100	84.416	Ovis_aries
ENSCLAG00000013966	RPUSD1	100	81.410	ENSPPAG00000034797	RPUSD1	100	81.090	Pan_paniscus
ENSCLAG00000013966	RPUSD1	100	82.680	ENSPPRG00000012389	RPUSD1	100	82.680	Panthera_pardus
ENSCLAG00000013966	RPUSD1	100	82.353	ENSPTIG00000008545	RPUSD1	92	82.353	Panthera_tigris_altaica
ENSCLAG00000013966	RPUSD1	100	81.410	ENSPTRG00000007565	RPUSD1	100	81.090	Pan_troglodytes
ENSCLAG00000013966	RPUSD1	100	82.692	ENSPANG00000024401	RPUSD1	100	82.372	Papio_anubis
ENSCLAG00000013966	RPUSD1	99	60.855	ENSPKIG00000018890	rpusd1	91	60.855	Paramormyrops_kingsleyae
ENSCLAG00000013966	RPUSD1	99	64.286	ENSPSIG00000013945	RPUSD1	100	64.590	Pelodiscus_sinensis
ENSCLAG00000013966	RPUSD1	98	57.860	ENSPMGG00000014950	rpusd1	98	57.860	Periophthalmus_magnuspinnatus
ENSCLAG00000013966	RPUSD1	100	86.928	ENSPEMG00000000497	Rpusd1	100	86.928	Peromyscus_maniculatus_bairdii
ENSCLAG00000013966	RPUSD1	84	56.371	ENSPMAG00000001563	rpusd1	84	56.371	Petromyzon_marinus
ENSCLAG00000013966	RPUSD1	100	69.608	ENSPCIG00000021216	-	94	69.608	Phascolarctos_cinereus
ENSCLAG00000013966	RPUSD1	98	57.191	ENSPFOG00000007946	rpusd1	98	57.191	Poecilia_formosa
ENSCLAG00000013966	RPUSD1	98	57.191	ENSPLAG00000011925	rpusd1	98	57.191	Poecilia_latipinna
ENSCLAG00000013966	RPUSD1	98	56.856	ENSPMEG00000002910	rpusd1	98	56.856	Poecilia_mexicana
ENSCLAG00000013966	RPUSD1	98	56.766	ENSPREG00000019851	rpusd1	98	56.667	Poecilia_reticulata
ENSCLAG00000013966	RPUSD1	100	65.359	ENSPCAG00000002258	RPUSD1	100	65.359	Procavia_capensis
ENSCLAG00000013966	RPUSD1	100	86.859	ENSPCOG00000022582	RPUSD1	100	85.577	Propithecus_coquereli
ENSCLAG00000013966	RPUSD1	100	81.090	ENSPVAG00000013104	RPUSD1	100	81.090	Pteropus_vampyrus
ENSCLAG00000013966	RPUSD1	83	65.613	ENSPNYG00000024076	rpusd1	98	57.860	Pundamilia_nyererei
ENSCLAG00000013966	RPUSD1	99	57.096	ENSPNAG00000013806	rpusd1	100	56.766	Pygocentrus_nattereri
ENSCLAG00000013966	RPUSD1	100	87.255	ENSRNOG00000023639	Rpusd1	100	87.255	Rattus_norvegicus
ENSCLAG00000013966	RPUSD1	100	83.013	ENSRBIG00000030238	RPUSD1	100	82.692	Rhinopithecus_bieti
ENSCLAG00000013966	RPUSD1	100	83.013	ENSRROG00000036663	RPUSD1	100	82.692	Rhinopithecus_roxellana
ENSCLAG00000013966	RPUSD1	100	83.987	ENSSBOG00000033063	RPUSD1	100	84.314	Saimiri_boliviensis_boliviensis
ENSCLAG00000013966	RPUSD1	100	68.954	ENSSHAG00000013500	RPUSD1	100	68.954	Sarcophilus_harrisii
ENSCLAG00000013966	RPUSD1	99	60.194	ENSSFOG00015014394	rpusd1	99	60.855	Scleropages_formosus
ENSCLAG00000013966	RPUSD1	83	64.427	ENSSMAG00000008045	rpusd1	91	55.987	Scophthalmus_maximus
ENSCLAG00000013966	RPUSD1	83	66.403	ENSSDUG00000001829	rpusd1	95	58.361	Seriola_dumerili
ENSCLAG00000013966	RPUSD1	83	66.403	ENSSLDG00000020853	rpusd1	95	58.361	Seriola_lalandi_dorsalis
ENSCLAG00000013966	RPUSD1	55	87.425	ENSSARG00000011187	-	100	87.425	Sorex_araneus
ENSCLAG00000013966	RPUSD1	63	53.000	ENSSPUG00000005119	-	100	52.500	Sphenodon_punctatus
ENSCLAG00000013966	RPUSD1	83	65.217	ENSSPAG00000012708	rpusd1	98	57.377	Stegastes_partitus
ENSCLAG00000013966	RPUSD1	100	83.654	ENSSSCG00000008000	RPUSD1	99	87.938	Sus_scrofa
ENSCLAG00000013966	RPUSD1	83	72.941	ENSTGUG00000015375	RPUSD1	100	72.941	Taeniopygia_guttata
ENSCLAG00000013966	RPUSD1	98	56.209	ENSTRUG00000003041	rpusd1	98	56.209	Takifugu_rubripes
ENSCLAG00000013966	RPUSD1	83	61.660	ENSTNIG00000002660	rpusd1	92	61.660	Tetraodon_nigroviridis
ENSCLAG00000013966	RPUSD1	100	84.936	ENSTTRG00000010167	RPUSD1	100	83.333	Tursiops_truncatus
ENSCLAG00000013966	RPUSD1	100	81.699	ENSUAMG00000012736	RPUSD1	100	82.353	Ursus_americanus
ENSCLAG00000013966	RPUSD1	100	81.699	ENSUMAG00000021174	RPUSD1	100	82.353	Ursus_maritimus
ENSCLAG00000013966	RPUSD1	100	80.782	ENSVVUG00000012357	RPUSD1	100	80.719	Vulpes_vulpes
ENSCLAG00000013966	RPUSD1	100	59.477	ENSXETG00000007184	rpusd1	100	59.477	Xenopus_tropicalis
ENSCLAG00000013966	RPUSD1	98	55.446	ENSXCOG00000017930	rpusd1	98	55.667	Xiphophorus_couchianus
ENSCLAG00000013966	RPUSD1	98	55.776	ENSXMAG00000024084	rpusd1	98	55.667	Xiphophorus_maculatus