EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000014325 (Gene tree)
Gene ID: 102007842
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 359508 bases
Position: chrJH721911.1:5278568-5638075
Accession: 102007842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000020905	RRM_1	PF00076.22	3.3e-34	1	2
ENSCLAP00000020905	RRM_1	PF00076.22	3.3e-34	2	2
ENSCLAP00000020906	RRM_1	PF00076.22	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000021106	MSI2-201	1041	XM_005394053	ENSCLAP00000020905	346 (aa)	XP_005394110	UPI000040B05D
ENSCLAT00000021107	MSI2-202	390	-	ENSCLAP00000020906	129 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000014325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000014325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000014325	MSI2	57	43.243	ENSCLAG00000002908	RBM3	82	43.243
ENSCLAG00000014325	MSI2	64	55.102	ENSCLAG00000011385	-	53	34.524
ENSCLAG00000014325	MSI2	57	38.356	ENSCLAG00000014547	TARDBP	66	32.877
ENSCLAG00000014325	MSI2	65	49.398	ENSCLAG00000016182	-	52	49.398
ENSCLAG00000014325	MSI2	76	51.807	ENSCLAG00000009221	DAZAP1	96	51.807
ENSCLAG00000014325	MSI2	82	44.144	ENSCLAG00000010786	-	95	32.192
ENSCLAG00000014325	MSI2	64	56.098	ENSCLAG00000011022	HNRNPAB	59	56.098
ENSCLAG00000014325	MSI2	60	38.462	ENSCLAG00000007977	-	67	35.088
ENSCLAG00000014325	MSI2	65	48.193	ENSCLAG00000014058	HNRNPA2B1	60	48.193
ENSCLAG00000014325	MSI2	57	44.595	ENSCLAG00000016087	CIRBP	57	44.595
ENSCLAG00000014325	MSI2	80	51.456	ENSCLAG00000006540	HNRNPD	81	40.800
ENSCLAG00000014325	MSI2	73	57.143	ENSCLAG00000008428	HNRNPDL	59	45.622
ENSCLAG00000014325	MSI2	61	50.000	ENSCLAG00000011502	-	51	50.000
ENSCLAG00000014325	MSI2	94	71.264	ENSCLAG00000011329	MSI1	100	69.006
ENSCLAG00000014325	MSI2	58	42.667	ENSCLAG00000008626	-	57	34.483
ENSCLAG00000014325	MSI2	67	47.312	ENSCLAG00000012855	HNRNPA3	99	34.328
ENSCLAG00000014325	MSI2	74	38.372	ENSCLAG00000004953	-	50	38.372
ENSCLAG00000014325	MSI2	64	48.936	ENSCLAG00000016175	-	50	30.526
ENSCLAG00000014325	MSI2	61	43.038	ENSCLAG00000015132	HNRNPA0	62	41.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000014325	MSI2	100	94.798	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSCLAG00000014325	MSI2	100	88.184	ENSAPOG00000001658	msi2a	100	87.749	Acanthochromis_polyacanthus
ENSCLAG00000014325	MSI2	94	100.000	ENSAMEG00000002697	MSI2	99	100.000	Ailuropoda_melanoleuca
ENSCLAG00000014325	MSI2	100	74.745	ENSACIG00000009475	msi2a	100	74.745	Amphilophus_citrinellus
ENSCLAG00000014325	MSI2	87	74.107	ENSAOCG00000014822	msi2a	69	76.667	Amphiprion_ocellaris
ENSCLAG00000014325	MSI2	100	88.184	ENSAPEG00000007706	msi2a	100	87.749	Amphiprion_percula
ENSCLAG00000014325	MSI2	94	87.500	ENSATEG00000003301	-	100	87.500	Anabas_testudineus
ENSCLAG00000014325	MSI2	100	88.184	ENSATEG00000010498	msi2a	100	87.749	Anabas_testudineus
ENSCLAG00000014325	MSI2	94	71.105	ENSACAG00000005452	MSI2	68	97.826	Anolis_carolinensis
ENSCLAG00000014325	MSI2	100	94.798	ENSANAG00000037827	MSI2	100	94.798	Aotus_nancymaae
ENSCLAG00000014325	MSI2	100	87.896	ENSACLG00000007752	msi2a	100	87.464	Astatotilapia_calliptera
ENSCLAG00000014325	MSI2	100	88.761	ENSAMXG00000032796	msi2a	100	85.549	Astyanax_mexicanus
ENSCLAG00000014325	MSI2	100	86.127	ENSAMXG00000010474	msi2b	100	86.127	Astyanax_mexicanus
ENSCLAG00000014325	MSI2	94	94.154	ENSBTAG00000004406	MSI2	97	94.154	Bos_taurus
ENSCLAG00000014325	MSI2	87	61.607	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSCLAG00000014325	MSI2	100	94.798	ENSCJAG00000013998	MSI2	100	94.798	Callithrix_jacchus
ENSCLAG00000014325	MSI2	94	98.746	ENSCAFG00020025620	MSI2	81	98.746	Canis_lupus_dingo
ENSCLAG00000014325	MSI2	100	93.353	ENSCHIG00000016580	MSI2	100	93.353	Capra_hircus
ENSCLAG00000014325	MSI2	94	89.667	ENSCPOG00000034042	MSI2	99	89.667	Cavia_porcellus
ENSCLAG00000014325	MSI2	100	94.798	ENSCCAG00000033927	MSI2	100	94.798	Cebus_capucinus
ENSCLAG00000014325	MSI2	100	93.642	ENSCATG00000040879	MSI2	100	93.642	Cercocebus_atys
ENSCLAG00000014325	MSI2	100	94.798	ENSCSAG00000005633	MSI2	100	94.798	Chlorocebus_sabaeus
ENSCLAG00000014325	MSI2	71	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSCLAG00000014325	MSI2	94	93.688	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSCLAG00000014325	MSI2	60	72.000	ENSCING00000018579	-	97	50.000	Ciona_intestinalis
ENSCLAG00000014325	MSI2	73	58.252	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSCLAG00000014325	MSI2	94	100.000	ENSCANG00000036414	MSI2	100	100.000	Colobus_angolensis_palliatus
ENSCLAG00000014325	MSI2	100	94.236	ENSCGRG00001013330	Msi2	100	94.236	Cricetulus_griseus_chok1gshd
ENSCLAG00000014325	MSI2	94	99.693	ENSCGRG00000003141	Msi2	100	99.693	Cricetulus_griseus_crigri
ENSCLAG00000014325	MSI2	87	84.821	ENSCSEG00000013549	msi2a	100	73.913	Cynoglossus_semilaevis
ENSCLAG00000014325	MSI2	79	69.340	ENSCSEG00000013557	msi2a	83	67.925	Cynoglossus_semilaevis
ENSCLAG00000014325	MSI2	100	75.723	ENSCSEG00000003266	-	100	75.723	Cynoglossus_semilaevis
ENSCLAG00000014325	MSI2	100	87.896	ENSCVAG00000017075	msi2a	100	87.464	Cyprinodon_variegatus
ENSCLAG00000014325	MSI2	93	88.820	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSCLAG00000014325	MSI2	100	79.639	ENSDARG00000033901	msi2a	100	79.639	Danio_rerio
ENSCLAG00000014325	MSI2	94	94.118	ENSDNOG00000014501	MSI2	100	94.118	Dasypus_novemcinctus
ENSCLAG00000014325	MSI2	79	81.395	ENSDORG00000005394	Msi2	84	81.395	Dipodomys_ordii
ENSCLAG00000014325	MSI2	70	93.333	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSCLAG00000014325	MSI2	97	59.104	FBgn0260943	Rbp6	88	67.808	Drosophila_melanogaster
ENSCLAG00000014325	MSI2	64	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSCLAG00000014325	MSI2	89	68.810	ENSEBUG00000006732	msi2a	87	68.489	Eptatretus_burgeri
ENSCLAG00000014325	MSI2	94	89.320	ENSEASG00005002965	MSI2	97	89.143	Equus_asinus_asinus
ENSCLAG00000014325	MSI2	100	97.458	ENSECAG00000011435	MSI2	100	97.458	Equus_caballus
ENSCLAG00000014325	MSI2	83	79.705	ENSEEUG00000007810	MSI2	100	79.705	Erinaceus_europaeus
ENSCLAG00000014325	MSI2	100	87.429	ENSELUG00000001361	msi2b	100	87.429	Esox_lucius
ENSCLAG00000014325	MSI2	100	84.682	ENSELUG00000011747	msi2a	100	84.682	Esox_lucius
ENSCLAG00000014325	MSI2	99	65.909	ENSFCAG00000033787	-	97	65.909	Felis_catus
ENSCLAG00000014325	MSI2	100	94.798	ENSFCAG00000041686	MSI2	100	94.798	Felis_catus
ENSCLAG00000014325	MSI2	94	100.000	ENSFDAG00000016118	MSI2	100	100.000	Fukomys_damarensis
ENSCLAG00000014325	MSI2	100	87.896	ENSFHEG00000000084	msi2a	96	93.421	Fundulus_heteroclitus
ENSCLAG00000014325	MSI2	81	93.269	ENSGMOG00000007596	-	100	93.269	Gadus_morhua
ENSCLAG00000014325	MSI2	100	96.532	ENSGALG00000005567	MSI2	100	96.532	Gallus_gallus
ENSCLAG00000014325	MSI2	87	87.500	ENSGAFG00000006974	msi2a	90	94.040	Gambusia_affinis
ENSCLAG00000014325	MSI2	94	96.053	ENSGAGG00000016542	MSI2	100	96.053	Gopherus_agassizii
ENSCLAG00000014325	MSI2	94	100.000	ENSGGOG00000013182	MSI2	100	100.000	Gorilla_gorilla
ENSCLAG00000014325	MSI2	100	87.896	ENSHBUG00000020800	msi2a	100	87.464	Haplochromis_burtoni
ENSCLAG00000014325	MSI2	100	91.040	ENSHGLG00000012444	MSI2	100	91.040	Heterocephalus_glaber_female
ENSCLAG00000014325	MSI2	76	100.000	ENSHGLG00100003744	MSI2	100	100.000	Heterocephalus_glaber_male
ENSCLAG00000014325	MSI2	70	93.333	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSCLAG00000014325	MSI2	97	85.503	ENSHCOG00000000266	msi2a	97	85.088	Hippocampus_comes
ENSCLAG00000014325	MSI2	76	81.369	ENSHCOG00000017241	-	77	81.967	Hippocampus_comes
ENSCLAG00000014325	MSI2	100	82.659	ENSIPUG00000021097	msi2a	100	82.659	Ictalurus_punctatus
ENSCLAG00000014325	MSI2	96	89.489	ENSIPUG00000003732	msi2b	100	82.081	Ictalurus_punctatus
ENSCLAG00000014325	MSI2	94	89.667	ENSSTOG00000007884	MSI2	99	89.667	Ictidomys_tridecemlineatus
ENSCLAG00000014325	MSI2	76	88.889	ENSJJAG00000006292	-	100	88.406	Jaculus_jaculus
ENSCLAG00000014325	MSI2	70	93.333	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSCLAG00000014325	MSI2	96	86.486	ENSKMAG00000009494	msi2a	96	86.747	Kryptolebias_marmoratus
ENSCLAG00000014325	MSI2	100	83.526	ENSLBEG00000007061	msi2a	100	83.526	Labrus_bergylta
ENSCLAG00000014325	MSI2	94	68.915	ENSLBEG00000026223	-	100	68.915	Labrus_bergylta
ENSCLAG00000014325	MSI2	71	93.407	ENSLACG00000016798	MSI2	98	93.407	Latimeria_chalumnae
ENSCLAG00000014325	MSI2	100	82.429	ENSLOCG00000004675	msi2b	100	84.553	Lepisosteus_oculatus
ENSCLAG00000014325	MSI2	94	100.000	ENSMFAG00000003775	MSI2	100	100.000	Macaca_fascicularis
ENSCLAG00000014325	MSI2	94	100.000	ENSMMUG00000002069	MSI2	100	100.000	Macaca_mulatta
ENSCLAG00000014325	MSI2	100	94.798	ENSMNEG00000045275	MSI2	100	94.798	Macaca_nemestrina
ENSCLAG00000014325	MSI2	94	100.000	ENSMLEG00000033888	MSI2	100	100.000	Mandrillus_leucophaeus
ENSCLAG00000014325	MSI2	96	87.164	ENSMAMG00000002488	-	99	92.715	Mastacembelus_armatus
ENSCLAG00000014325	MSI2	100	85.227	ENSMAMG00000010503	msi2a	100	85.795	Mastacembelus_armatus
ENSCLAG00000014325	MSI2	100	87.572	ENSMZEG00005007676	msi2a	100	87.572	Maylandia_zebra
ENSCLAG00000014325	MSI2	100	99.424	ENSMAUG00000003862	Msi2	100	99.424	Mesocricetus_auratus
ENSCLAG00000014325	MSI2	100	76.945	ENSMICG00000032913	-	100	75.504	Microcebus_murinus
ENSCLAG00000014325	MSI2	100	94.798	ENSMICG00000013598	-	100	94.798	Microcebus_murinus
ENSCLAG00000014325	MSI2	100	99.711	ENSMOCG00000005820	Msi2	100	99.711	Microtus_ochrogaster
ENSCLAG00000014325	MSI2	90	81.459	ENSMMOG00000008348	msi2a	90	84.211	Mola_mola
ENSCLAG00000014325	MSI2	76	98.551	ENSMODG00000014790	MSI2	100	98.551	Monodelphis_domestica
ENSCLAG00000014325	MSI2	100	88.184	ENSMALG00000000071	msi2a	100	93.464	Monopterus_albus
ENSCLAG00000014325	MSI2	100	99.711	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSCLAG00000014325	MSI2	100	99.711	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSCLAG00000014325	MSI2	100	99.711	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSCLAG00000014325	MSI2	100	99.711	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSCLAG00000014325	MSI2	94	94.462	ENSMPUG00000015377	MSI2	97	94.462	Mustela_putorius_furo
ENSCLAG00000014325	MSI2	94	94.154	ENSMLUG00000007865	MSI2	97	94.154	Myotis_lucifugus
ENSCLAG00000014325	MSI2	100	99.711	ENSNGAG00000017807	Msi2	100	99.711	Nannospalax_galili
ENSCLAG00000014325	MSI2	100	83.237	ENSNBRG00000014596	msi2a	92	94.079	Neolamprologus_brichardi
ENSCLAG00000014325	MSI2	94	100.000	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSCLAG00000014325	MSI2	64	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSCLAG00000014325	MSI2	100	100.000	ENSODEG00000011974	MSI2	100	100.000	Octodon_degus
ENSCLAG00000014325	MSI2	87	87.500	ENSONIG00000001972	msi2a	84	94.040	Oreochromis_niloticus
ENSCLAG00000014325	MSI2	93	95.745	ENSOANG00000005667	MSI2	77	95.745	Ornithorhynchus_anatinus
ENSCLAG00000014325	MSI2	94	94.462	ENSOCUG00000010440	MSI2	97	94.462	Oryctolagus_cuniculus
ENSCLAG00000014325	MSI2	96	87.387	ENSORLG00000009671	msi2a	95	87.651	Oryzias_latipes
ENSCLAG00000014325	MSI2	94	88.650	ENSORLG00020021556	msi2a	95	88.182	Oryzias_latipes_hni
ENSCLAG00000014325	MSI2	96	87.387	ENSORLG00015004592	msi2a	95	87.651	Oryzias_latipes_hsok
ENSCLAG00000014325	MSI2	100	82.081	ENSOMEG00000000146	msi2a	98	86.520	Oryzias_melastigma
ENSCLAG00000014325	MSI2	94	90.154	ENSOGAG00000005621	MSI2	99	90.154	Otolemur_garnettii
ENSCLAG00000014325	MSI2	94	100.000	ENSPPAG00000037697	MSI2	100	100.000	Pan_paniscus
ENSCLAG00000014325	MSI2	94	94.462	ENSPPRG00000001848	MSI2	91	99.103	Panthera_pardus
ENSCLAG00000014325	MSI2	70	78.512	ENSPTIG00000021873	-	92	78.512	Panthera_tigris_altaica
ENSCLAG00000014325	MSI2	94	100.000	ENSPTIG00000021678	MSI2	96	100.000	Panthera_tigris_altaica
ENSCLAG00000014325	MSI2	94	100.000	ENSPTRG00000009437	MSI2	100	100.000	Pan_troglodytes
ENSCLAG00000014325	MSI2	100	94.798	ENSPANG00000022319	MSI2	100	94.798	Papio_anubis
ENSCLAG00000014325	MSI2	100	81.720	ENSPKIG00000007038	-	100	80.645	Paramormyrops_kingsleyae
ENSCLAG00000014325	MSI2	71	92.308	ENSPKIG00000017107	-	81	92.308	Paramormyrops_kingsleyae
ENSCLAG00000014325	MSI2	87	91.071	ENSPSIG00000008618	MSI2	87	96.642	Pelodiscus_sinensis
ENSCLAG00000014325	MSI2	100	82.948	ENSPMGG00000005888	msi2a	100	82.948	Periophthalmus_magnuspinnatus
ENSCLAG00000014325	MSI2	70	93.333	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCLAG00000014325	MSI2	100	95.480	ENSPCIG00000006063	MSI2	100	95.480	Phascolarctos_cinereus
ENSCLAG00000014325	MSI2	81	92.381	ENSPFOG00000019337	MSI2	92	91.429	Poecilia_formosa
ENSCLAG00000014325	MSI2	87	87.500	ENSPLAG00000000436	msi2a	76	90.845	Poecilia_latipinna
ENSCLAG00000014325	MSI2	87	74.107	ENSPMEG00000013247	msi2a	80	79.720	Poecilia_mexicana
ENSCLAG00000014325	MSI2	99	81.214	ENSPREG00000000881	msi2a	99	81.214	Poecilia_reticulata
ENSCLAG00000014325	MSI2	94	89.844	ENSPPYG00000008244	-	100	89.844	Pongo_abelii
ENSCLAG00000014325	MSI2	74	65.625	ENSPCAG00000010552	MSI2	100	65.625	Procavia_capensis
ENSCLAG00000014325	MSI2	71	93.407	ENSPCOG00000019195	-	93	99.237	Propithecus_coquereli
ENSCLAG00000014325	MSI2	94	85.531	ENSPVAG00000017053	MSI2	100	85.531	Pteropus_vampyrus
ENSCLAG00000014325	MSI2	100	87.572	ENSPNYG00000018393	msi2a	100	87.572	Pundamilia_nyererei
ENSCLAG00000014325	MSI2	100	88.761	ENSPNAG00000014957	msi2a	100	86.416	Pygocentrus_nattereri
ENSCLAG00000014325	MSI2	100	85.591	ENSPNAG00000000844	msi2b	100	83.237	Pygocentrus_nattereri
ENSCLAG00000014325	MSI2	94	93.919	ENSRNOG00000025338	Msi2	100	93.919	Rattus_norvegicus
ENSCLAG00000014325	MSI2	71	82.418	ENSRBIG00000032064	-	84	82.418	Rhinopithecus_bieti
ENSCLAG00000014325	MSI2	71	93.407	ENSRROG00000034421	-	92	99.130	Rhinopithecus_roxellana
ENSCLAG00000014325	MSI2	94	100.000	ENSSBOG00000026425	MSI2	100	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000014325	MSI2	94	98.765	ENSSHAG00000008672	MSI2	100	98.765	Sarcophilus_harrisii
ENSCLAG00000014325	MSI2	100	62.935	ENSSFOG00015012168	msi2b	82	82.449	Scleropages_formosus
ENSCLAG00000014325	MSI2	94	84.615	ENSSFOG00015021687	-	97	82.154	Scleropages_formosus
ENSCLAG00000014325	MSI2	100	88.184	ENSSMAG00000018484	msi2a	100	87.749	Scophthalmus_maximus
ENSCLAG00000014325	MSI2	100	88.184	ENSSDUG00000014507	msi2a	100	87.749	Seriola_dumerili
ENSCLAG00000014325	MSI2	100	82.370	ENSSDUG00000021968	-	99	92.053	Seriola_dumerili
ENSCLAG00000014325	MSI2	100	83.526	ENSSLDG00000017172	msi2a	100	83.526	Seriola_lalandi_dorsalis
ENSCLAG00000014325	MSI2	71	75.824	ENSSLDG00000021332	-	68	75.824	Seriola_lalandi_dorsalis
ENSCLAG00000014325	MSI2	87	90.179	ENSSPUG00000000913	-	94	94.304	Sphenodon_punctatus
ENSCLAG00000014325	MSI2	100	78.063	ENSSPAG00000017793	msi2a	100	77.778	Stegastes_partitus
ENSCLAG00000014325	MSI2	100	97.458	ENSSSCG00000038505	MSI2	100	97.458	Sus_scrofa
ENSCLAG00000014325	MSI2	76	99.034	ENSTGUG00000008452	MSI2	100	99.034	Taeniopygia_guttata
ENSCLAG00000014325	MSI2	100	82.436	ENSTRUG00000021248	msi2a	100	82.436	Takifugu_rubripes
ENSCLAG00000014325	MSI2	87	73.214	ENSTBEG00000001241	MSI2	73	82.645	Tupaia_belangeri
ENSCLAG00000014325	MSI2	94	84.375	ENSTTRG00000002189	MSI2	100	84.375	Tursiops_truncatus
ENSCLAG00000014325	MSI2	94	94.462	ENSUAMG00000000700	MSI2	97	94.462	Ursus_americanus
ENSCLAG00000014325	MSI2	90	86.219	ENSUMAG00000000505	MSI2	95	86.219	Ursus_maritimus
ENSCLAG00000014325	MSI2	71	92.208	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSCLAG00000014325	MSI2	100	100.000	ENSVVUG00000011783	MSI2	100	100.000	Vulpes_vulpes
ENSCLAG00000014325	MSI2	100	78.238	ENSXCOG00000006113	msi2a	100	78.238	Xiphophorus_couchianus
ENSCLAG00000014325	MSI2	100	87.896	ENSXMAG00000000608	msi2a	100	87.464	Xiphophorus_maculatus