EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000014592 (Gene tree)
Gene ID: 102003721
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 34303 bases
Position: chrJH721912.1:4401089-4435391
Accession: 102003721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000021303	PWI	PF01480.17	5.7e-30	1	1
ENSCLAP00000021302	PWI	PF01480.17	5.8e-30	1	1
ENSCLAP00000021301	PWI	PF01480.17	5.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000021504	SRRM1-202	4475	XM_005394815	ENSCLAP00000021302	901 (aa)	XP_005394872	UPI00038EE93D
ENSCLAT00000021505	SRRM1-203	2682	-	ENSCLAP00000021303	893 (aa)	-	-
ENSCLAT00000021503	SRRM1-201	4518	XM_005394812	ENSCLAP00000021301	915 (aa)	XP_005394869	UPI00038F191D

Gene Model

Click here to download ENSCLAG00000014592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000014592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000014592	SRRM1	100	96.571	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSCLAG00000014592	SRRM1	100	95.861	ENSAMEG00000010075	SRRM1	100	95.861	Ailuropoda_melanoleuca
ENSCLAG00000014592	SRRM1	60	62.687	ENSAPLG00000002066	SRRM1	59	74.911	Anas_platyrhynchos
ENSCLAG00000014592	SRRM1	100	96.187	ENSANAG00000035606	SRRM1	100	96.187	Aotus_nancymaae
ENSCLAG00000014592	SRRM1	100	96.559	ENSBTAG00000013772	SRRM1	100	96.559	Bos_taurus
ENSCLAG00000014592	SRRM1	100	96.239	ENSCAFG00020020948	SRRM1	100	96.239	Canis_lupus_dingo
ENSCLAG00000014592	SRRM1	100	95.290	ENSCHIG00000014656	SRRM1	100	95.290	Capra_hircus
ENSCLAG00000014592	SRRM1	100	96.350	ENSTSYG00000006782	SRRM1	100	96.350	Carlito_syrichta
ENSCLAG00000014592	SRRM1	99	95.705	ENSCAPG00000011473	SRRM1	100	95.705	Cavia_aperea
ENSCLAG00000014592	SRRM1	100	96.612	ENSCPOG00000015594	SRRM1	100	96.612	Cavia_porcellus
ENSCLAG00000014592	SRRM1	100	96.018	ENSCCAG00000029474	SRRM1	100	96.018	Cebus_capucinus
ENSCLAG00000014592	SRRM1	74	96.944	ENSCHOG00000000027	SRRM1	71	96.944	Choloepus_hoffmanni
ENSCLAG00000014592	SRRM1	100	96.074	ENSEASG00005004270	SRRM1	100	96.074	Equus_asinus_asinus
ENSCLAG00000014592	SRRM1	100	96.235	ENSECAG00000026981	SRRM1	100	96.235	Equus_caballus
ENSCLAG00000014592	SRRM1	100	96.350	ENSFCAG00000000678	-	100	96.350	Felis_catus
ENSCLAG00000014592	SRRM1	100	97.705	ENSFDAG00000009903	SRRM1	100	97.705	Fukomys_damarensis
ENSCLAG00000014592	SRRM1	100	96.460	ENSGGOG00000005209	SRRM1	100	96.460	Gorilla_gorilla
ENSCLAG00000014592	SRRM1	100	97.596	ENSHGLG00000017105	SRRM1	100	97.596	Heterocephalus_glaber_female
ENSCLAG00000014592	SRRM1	100	96.659	ENSHGLG00100016772	SRRM1	99	97.101	Heterocephalus_glaber_male
ENSCLAG00000014592	SRRM1	100	97.277	ENSSTOG00000014640	SRRM1	100	97.277	Ictidomys_tridecemlineatus
ENSCLAG00000014592	SRRM1	100	93.411	ENSLAFG00000013830	SRRM1	100	93.411	Loxodonta_africana
ENSCLAG00000014592	SRRM1	60	75.605	ENSMFAG00000038841	-	61	76.258	Macaca_fascicularis
ENSCLAG00000014592	SRRM1	55	77.062	ENSMMUG00000039269	-	59	76.258	Macaca_mulatta
ENSCLAG00000014592	SRRM1	60	100.000	ENSMLEG00000038030	-	92	98.004	Mandrillus_leucophaeus
ENSCLAG00000014592	SRRM1	100	96.514	ENSMICG00000006553	SRRM1	100	96.514	Microcebus_murinus
ENSCLAG00000014592	SRRM1	100	93.926	ENSNGAG00000014562	Srrm1	100	95.445	Nannospalax_galili
ENSCLAG00000014592	SRRM1	100	96.571	ENSNLEG00000008966	SRRM1	100	96.571	Nomascus_leucogenys
ENSCLAG00000014592	SRRM1	54	85.574	ENSMEUG00000014704	SRRM1	53	85.246	Notamacropus_eugenii
ENSCLAG00000014592	SRRM1	100	96.296	ENSOGAG00000010210	SRRM1	100	96.296	Otolemur_garnettii
ENSCLAG00000014592	SRRM1	92	96.805	ENSOARG00000006453	SRRM1	99	96.805	Ovis_aries
ENSCLAG00000014592	SRRM1	100	96.460	ENSPPAG00000043918	SRRM1	100	96.460	Pan_paniscus
ENSCLAG00000014592	SRRM1	100	96.350	ENSPPRG00000002509	SRRM1	100	96.350	Panthera_pardus
ENSCLAG00000014592	SRRM1	100	96.623	ENSPTRG00000000349	SRRM1	100	96.623	Pan_troglodytes
ENSCLAG00000014592	SRRM1	55	75.403	ENSPANG00000035568	-	59	74.194	Papio_anubis
ENSCLAG00000014592	SRRM1	100	95.969	ENSPPYG00000001716	SRRM1	100	95.969	Pongo_abelii
ENSCLAG00000014592	SRRM1	100	96.083	ENSPCOG00000021311	SRRM1	100	96.083	Propithecus_coquereli
ENSCLAG00000014592	SRRM1	100	95.861	ENSPVAG00000005836	SRRM1	100	95.861	Pteropus_vampyrus
ENSCLAG00000014592	SRRM1	100	94.880	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000014592	SRRM1	61	90.492	ENSSARG00000013718	SRRM1	60	90.492	Sorex_araneus
ENSCLAG00000014592	SRRM1	100	96.507	ENSTBEG00000000100	SRRM1	100	96.507	Tupaia_belangeri
ENSCLAG00000014592	SRRM1	89	96.992	ENSUMAG00000013121	SRRM1	95	96.992	Ursus_maritimus
ENSCLAG00000014592	SRRM1	100	89.219	ENSVVUG00000026966	SRRM1	100	89.219	Vulpes_vulpes