EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000014605 (Gene tree)
Gene ID: 102020099
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 64542 bases
Position: chrJH721872.1:30852969-30917510
Accession: 102020099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000021325	zf-C2H2	PF00096.26	3.1e-33	1	5
ENSCLAP00000021325	zf-C2H2	PF00096.26	3.1e-33	2	5
ENSCLAP00000021325	zf-C2H2	PF00096.26	3.1e-33	3	5
ENSCLAP00000021325	zf-C2H2	PF00096.26	3.1e-33	4	5
ENSCLAP00000021325	zf-C2H2	PF00096.26	3.1e-33	5	5
ENSCLAP00000021326	zf-C2H2	PF00096.26	3.2e-28	1	4
ENSCLAP00000021326	zf-C2H2	PF00096.26	3.2e-28	2	4
ENSCLAP00000021326	zf-C2H2	PF00096.26	3.2e-28	3	4
ENSCLAP00000021326	zf-C2H2	PF00096.26	3.2e-28	4	4
ENSCLAP00000021326	zf-met	PF12874.7	3.1e-09	1	2
ENSCLAP00000021326	zf-met	PF12874.7	3.1e-09	2	2
ENSCLAP00000021325	zf-met	PF12874.7	5.4e-06	1	2
ENSCLAP00000021325	zf-met	PF12874.7	5.4e-06	2	2
ENSCLAP00000021325	zf-C2H2_jaz	PF12171.8	5.5e-17	1	1
ENSCLAP00000021326	zf-C2H2_jaz	PF12171.8	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000021528	PRDM10-202	3276	-	ENSCLAP00000021326	1091 (aa)	-	-
ENSCLAT00000021527	PRDM10-201	7132	XM_013511217	ENSCLAP00000021325	1157 (aa)	XP_013366671	UPI00038EE5D7

Gene Model

Click here to download ENSCLAG00000014605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000014605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000014605	PRDM10	54	34.409	ENSCLAG00000012556	-	73	33.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000014605	PRDM10	99	97.403	ENSG00000170325	PRDM10	100	93.037	Homo_sapiens
ENSCLAG00000014605	PRDM10	99	97.368	ENSAMEG00000002425	PRDM10	97	91.045	Ailuropoda_melanoleuca
ENSCLAG00000014605	PRDM10	99	83.960	ENSAPLG00000004858	PRDM10	100	82.494	Anas_platyrhynchos
ENSCLAG00000014605	PRDM10	99	97.403	ENSANAG00000022064	PRDM10	100	77.350	Aotus_nancymaae
ENSCLAG00000014605	PRDM10	100	90.488	ENSBTAG00000019001	PRDM10	100	89.847	Bos_taurus
ENSCLAG00000014605	PRDM10	99	97.403	ENSCJAG00000009235	PRDM10	100	91.859	Callithrix_jacchus
ENSCLAG00000014605	PRDM10	99	98.718	ENSCAFG00000010164	PRDM10	100	90.768	Canis_familiaris
ENSCLAG00000014605	PRDM10	99	98.718	ENSCAFG00020010152	PRDM10	100	89.661	Canis_lupus_dingo
ENSCLAG00000014605	PRDM10	100	90.660	ENSCHIG00000026530	PRDM10	100	89.889	Capra_hircus
ENSCLAG00000014605	PRDM10	99	97.403	ENSTSYG00000000544	PRDM10	100	92.545	Carlito_syrichta
ENSCLAG00000014605	PRDM10	100	88.984	ENSCAPG00000017296	PRDM10	100	88.642	Cavia_aperea
ENSCLAG00000014605	PRDM10	99	89.009	ENSCPOG00000000389	PRDM10	98	89.009	Cavia_porcellus
ENSCLAG00000014605	PRDM10	99	97.403	ENSCCAG00000024567	PRDM10	100	91.859	Cebus_capucinus
ENSCLAG00000014605	PRDM10	99	96.104	ENSCATG00000040031	PRDM10	100	92.117	Cercocebus_atys
ENSCLAG00000014605	PRDM10	99	96.104	ENSCSAG00000002202	PRDM10	100	92.202	Chlorocebus_sabaeus
ENSCLAG00000014605	PRDM10	99	83.663	ENSCPBG00000026880	PRDM10	99	80.182	Chrysemys_picta_bellii
ENSCLAG00000014605	PRDM10	99	96.104	ENSCANG00000032669	PRDM10	100	91.859	Colobus_angolensis_palliatus
ENSCLAG00000014605	PRDM10	99	97.436	ENSCGRG00001021647	Prdm10	99	91.478	Cricetulus_griseus_chok1gshd
ENSCLAG00000014605	PRDM10	99	97.436	ENSCGRG00000006562	Prdm10	99	91.478	Cricetulus_griseus_crigri
ENSCLAG00000014605	PRDM10	80	93.506	ENSDNOG00000001366	PRDM10	95	92.194	Dasypus_novemcinctus
ENSCLAG00000014605	PRDM10	100	91.976	ENSDORG00000014292	Prdm10	100	91.717	Dipodomys_ordii
ENSCLAG00000014605	PRDM10	98	100.000	ENSEASG00005022914	PRDM10	100	91.688	Equus_asinus_asinus
ENSCLAG00000014605	PRDM10	98	100.000	ENSECAG00000011499	PRDM10	100	91.602	Equus_caballus
ENSCLAG00000014605	PRDM10	99	97.436	ENSFCAG00000004111	PRDM10	96	91.092	Felis_catus
ENSCLAG00000014605	PRDM10	99	83.913	ENSFALG00000004873	PRDM10	100	79.074	Ficedula_albicollis
ENSCLAG00000014605	PRDM10	100	95.741	ENSFDAG00000017311	PRDM10	100	95.741	Fukomys_damarensis
ENSCLAG00000014605	PRDM10	99	84.158	ENSGALG00000033660	PRDM10	99	83.215	Gallus_gallus
ENSCLAG00000014605	PRDM10	99	64.948	ENSGACG00000012293	prdm10	100	63.724	Gasterosteus_aculeatus
ENSCLAG00000014605	PRDM10	99	83.117	ENSGAGG00000012523	PRDM10	99	81.378	Gopherus_agassizii
ENSCLAG00000014605	PRDM10	99	97.403	ENSGGOG00000015359	PRDM10	100	92.288	Gorilla_gorilla
ENSCLAG00000014605	PRDM10	100	96.821	ENSHGLG00000001106	PRDM10	100	96.821	Heterocephalus_glaber_female
ENSCLAG00000014605	PRDM10	100	96.902	ENSHGLG00100002350	PRDM10	100	96.902	Heterocephalus_glaber_male
ENSCLAG00000014605	PRDM10	100	93.059	ENSSTOG00000002015	PRDM10	100	92.631	Ictidomys_tridecemlineatus
ENSCLAG00000014605	PRDM10	80	92.593	ENSJJAG00000021493	Prdm10	90	92.116	Jaculus_jaculus
ENSCLAG00000014605	PRDM10	100	89.069	ENSLAFG00000031867	PRDM10	100	88.642	Loxodonta_africana
ENSCLAG00000014605	PRDM10	99	96.104	ENSMFAG00000031008	PRDM10	100	92.202	Macaca_fascicularis
ENSCLAG00000014605	PRDM10	99	96.104	ENSMMUG00000017555	PRDM10	100	92.202	Macaca_mulatta
ENSCLAG00000014605	PRDM10	99	96.104	ENSMNEG00000036493	PRDM10	100	92.117	Macaca_nemestrina
ENSCLAG00000014605	PRDM10	93	100.000	ENSMLEG00000042028	PRDM10	91	100.000	Mandrillus_leucophaeus
ENSCLAG00000014605	PRDM10	99	84.012	ENSMGAG00000001112	PRDM10	100	79.553	Meleagris_gallopavo
ENSCLAG00000014605	PRDM10	100	92.288	ENSMICG00000013888	PRDM10	100	91.859	Microcebus_murinus
ENSCLAG00000014605	PRDM10	99	91.956	ENSMOCG00000021853	Prdm10	100	90.901	Microtus_ochrogaster
ENSCLAG00000014605	PRDM10	82	83.370	ENSMODG00000004979	PRDM10	99	86.034	Monodelphis_domestica
ENSCLAG00000014605	PRDM10	99	92.369	ENSMUSG00000042496	Prdm10	99	90.877	Mus_musculus
ENSCLAG00000014605	PRDM10	100	91.588	MGP_SPRETEiJ_G0033061	-	100	91.073	Mus_spretus
ENSCLAG00000014605	PRDM10	99	98.701	ENSMPUG00000008711	PRDM10	99	90.831	Mustela_putorius_furo
ENSCLAG00000014605	PRDM10	100	89.838	ENSMLUG00000013051	PRDM10	100	89.496	Myotis_lucifugus
ENSCLAG00000014605	PRDM10	100	92.494	ENSNGAG00000000580	Prdm10	100	92.235	Nannospalax_galili
ENSCLAG00000014605	PRDM10	99	97.403	ENSNLEG00000007488	PRDM10	100	91.859	Nomascus_leucogenys
ENSCLAG00000014605	PRDM10	100	95.799	ENSODEG00000005309	PRDM10	100	95.799	Octodon_degus
ENSCLAG00000014605	PRDM10	99	79.843	ENSOANG00000000577	-	100	77.280	Ornithorhynchus_anatinus
ENSCLAG00000014605	PRDM10	99	94.805	ENSOCUG00000003736	PRDM10	100	89.974	Oryctolagus_cuniculus
ENSCLAG00000014605	PRDM10	99	94.805	ENSOGAG00000010723	PRDM10	100	90.350	Otolemur_garnettii
ENSCLAG00000014605	PRDM10	100	90.746	ENSOARG00000014507	PRDM10	100	89.974	Ovis_aries
ENSCLAG00000014605	PRDM10	99	96.104	ENSPPAG00000042881	PRDM10	100	92.117	Pan_paniscus
ENSCLAG00000014605	PRDM10	99	97.403	ENSPPRG00000007002	PRDM10	100	90.746	Panthera_pardus
ENSCLAG00000014605	PRDM10	99	97.403	ENSPTIG00000013331	PRDM10	100	90.660	Panthera_tigris_altaica
ENSCLAG00000014605	PRDM10	97	98.214	ENSPTRG00000004477	PRDM10	100	92.117	Pan_troglodytes
ENSCLAG00000014605	PRDM10	99	96.104	ENSPANG00000017470	PRDM10	100	92.117	Papio_anubis
ENSCLAG00000014605	PRDM10	99	96.154	ENSPEMG00000014985	Prdm10	100	90.169	Peromyscus_maniculatus_bairdii
ENSCLAG00000014605	PRDM10	99	97.403	ENSPPYG00000004061	PRDM10	100	92.031	Pongo_abelii
ENSCLAG00000014605	PRDM10	91	94.545	ENSPCAG00000014514	PRDM10	92	94.545	Procavia_capensis
ENSCLAG00000014605	PRDM10	99	98.701	ENSPCOG00000023406	PRDM10	100	78.034	Propithecus_coquereli
ENSCLAG00000014605	PRDM10	100	91.289	ENSPVAG00000012764	PRDM10	100	90.863	Pteropus_vampyrus
ENSCLAG00000014605	PRDM10	100	92.248	ENSRNOG00000007853	Prdm10	100	91.731	Rattus_norvegicus
ENSCLAG00000014605	PRDM10	99	96.104	ENSRBIG00000030924	PRDM10	100	92.031	Rhinopithecus_bieti
ENSCLAG00000014605	PRDM10	99	96.104	ENSRROG00000034334	PRDM10	100	92.031	Rhinopithecus_roxellana
ENSCLAG00000014605	PRDM10	99	97.403	ENSSBOG00000008773	PRDM10	100	91.859	Saimiri_boliviensis_boliviensis
ENSCLAG00000014605	PRDM10	99	90.909	ENSSHAG00000004503	PRDM10	99	85.666	Sarcophilus_harrisii
ENSCLAG00000014605	PRDM10	69	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSCLAG00000014605	PRDM10	100	80.308	ENSSPUG00000001178	PRDM10	97	83.193	Sphenodon_punctatus
ENSCLAG00000014605	PRDM10	99	97.403	ENSSSCG00000015243	PRDM10	100	92.794	Sus_scrofa
ENSCLAG00000014605	PRDM10	99	84.059	ENSTGUG00000000530	PRDM10	100	81.942	Taeniopygia_guttata
ENSCLAG00000014605	PRDM10	94	98.188	ENSTBEG00000007221	PRDM10	94	90.708	Tupaia_belangeri
ENSCLAG00000014605	PRDM10	100	89.820	ENSTTRG00000009189	PRDM10	100	89.050	Tursiops_truncatus
ENSCLAG00000014605	PRDM10	90	97.436	ENSUAMG00000018832	PRDM10	96	91.604	Ursus_americanus
ENSCLAG00000014605	PRDM10	99	96.104	ENSUMAG00000003167	PRDM10	98	91.714	Ursus_maritimus
ENSCLAG00000014605	PRDM10	99	98.701	ENSVVUG00000019878	PRDM10	100	90.660	Vulpes_vulpes
ENSCLAG00000014605	PRDM10	99	71.344	ENSXETG00000032173	PRDM10	100	66.996	Xenopus_tropicalis