EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000014767 (Gene tree)
Gene ID: 102025074
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 31167 bases
Position: chrJH721863.1:3134955-3166121
Accession: 102025074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000021581	SF3b1	PF08920.10	3.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000021784	SF3B1-201	8700	XM_005373873	ENSCLAP00000021581	1304 (aa)	XP_005373930	-

Gene Model

Click here to download ENSCLAG00000014767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000014767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000014767	SF3B1	99	100.000	ENSG00000115524	SF3B1	99	100.000	Homo_sapiens
ENSCLAG00000014767	SF3B1	99	93.716	ENSAPOG00000011894	sf3b1	99	93.578	Acanthochromis_polyacanthus
ENSCLAG00000014767	SF3B1	99	99.693	ENSAMEG00000013809	SF3B1	99	99.693	Ailuropoda_melanoleuca
ENSCLAG00000014767	SF3B1	99	93.170	ENSACIG00000020910	sf3b1	96	93.016	Amphilophus_citrinellus
ENSCLAG00000014767	SF3B1	99	93.578	ENSAOCG00000004478	sf3b1	99	93.578	Amphiprion_ocellaris
ENSCLAG00000014767	SF3B1	99	93.578	ENSAPEG00000012937	sf3b1	99	93.578	Amphiprion_percula
ENSCLAG00000014767	SF3B1	99	93.712	ENSATEG00000020435	sf3b1	99	93.712	Anabas_testudineus
ENSCLAG00000014767	SF3B1	99	99.382	ENSAPLG00000003993	SF3B1	99	99.382	Anas_platyrhynchos
ENSCLAG00000014767	SF3B1	99	98.919	ENSACAG00000009612	SF3B1	99	98.919	Anolis_carolinensis
ENSCLAG00000014767	SF3B1	99	100.000	ENSANAG00000021577	SF3B1	100	100.000	Aotus_nancymaae
ENSCLAG00000014767	SF3B1	99	92.808	ENSACLG00000023470	sf3b1	99	92.655	Astatotilapia_calliptera
ENSCLAG00000014767	SF3B1	99	94.109	ENSAMXG00000002219	sf3b1	99	93.956	Astyanax_mexicanus
ENSCLAG00000014767	SF3B1	99	99.923	ENSBTAG00000008915	SF3B1	99	99.923	Bos_taurus
ENSCLAG00000014767	SF3B1	98	66.440	WBGene00011605	sftb-1	98	66.516	Caenorhabditis_elegans
ENSCLAG00000014767	SF3B1	99	100.000	ENSCJAG00000003902	SF3B1	99	100.000	Callithrix_jacchus
ENSCLAG00000014767	SF3B1	99	100.000	ENSCAFG00000010826	SF3B1	99	100.000	Canis_familiaris
ENSCLAG00000014767	SF3B1	99	100.000	ENSCAFG00020004750	SF3B1	99	100.000	Canis_lupus_dingo
ENSCLAG00000014767	SF3B1	99	99.923	ENSCHIG00000015226	SF3B1	99	99.923	Capra_hircus
ENSCLAG00000014767	SF3B1	99	99.923	ENSTSYG00000009214	SF3B1	99	99.923	Carlito_syrichta
ENSCLAG00000014767	SF3B1	99	100.000	ENSCAPG00000006547	SF3B1	99	100.000	Cavia_aperea
ENSCLAG00000014767	SF3B1	99	100.000	ENSCPOG00000009353	SF3B1	100	100.000	Cavia_porcellus
ENSCLAG00000014767	SF3B1	99	100.000	ENSCCAG00000020506	SF3B1	99	100.000	Cebus_capucinus
ENSCLAG00000014767	SF3B1	99	100.000	ENSCATG00000035735	SF3B1	99	100.000	Cercocebus_atys
ENSCLAG00000014767	SF3B1	99	100.000	ENSCSAG00000011505	SF3B1	99	100.000	Chlorocebus_sabaeus
ENSCLAG00000014767	SF3B1	76	98.214	ENSCHOG00000009860	SF3B1	75	98.182	Choloepus_hoffmanni
ENSCLAG00000014767	SF3B1	99	99.228	ENSCPBG00000021902	SF3B1	99	99.406	Chrysemys_picta_bellii
ENSCLAG00000014767	SF3B1	68	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSCLAG00000014767	SF3B1	99	80.061	ENSCSAVG00000002559	-	99	79.665	Ciona_savignyi
ENSCLAG00000014767	SF3B1	99	100.000	ENSCANG00000029415	SF3B1	99	100.000	Colobus_angolensis_palliatus
ENSCLAG00000014767	SF3B1	99	100.000	ENSCGRG00001016990	Sf3b1	99	100.000	Cricetulus_griseus_chok1gshd
ENSCLAG00000014767	SF3B1	99	100.000	ENSCGRG00000005301	Sf3b1	99	100.000	Cricetulus_griseus_crigri
ENSCLAG00000014767	SF3B1	99	90.023	ENSCSEG00000003860	sf3b1	99	89.946	Cynoglossus_semilaevis
ENSCLAG00000014767	SF3B1	95	93.631	ENSCVAG00000003680	sf3b1	99	93.631	Cyprinodon_variegatus
ENSCLAG00000014767	SF3B1	99	93.578	ENSDARG00000056138	sf3b1	99	93.502	Danio_rerio
ENSCLAG00000014767	SF3B1	99	99.923	ENSDNOG00000011754	SF3B1	99	99.923	Dasypus_novemcinctus
ENSCLAG00000014767	SF3B1	99	97.297	ENSDORG00000002399	Sf3b1	100	97.297	Dipodomys_ordii
ENSCLAG00000014767	SF3B1	99	76.758	FBgn0031266	Sf3b1	99	76.758	Drosophila_melanogaster
ENSCLAG00000014767	SF3B1	83	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSCLAG00000014767	SF3B1	99	87.270	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSCLAG00000014767	SF3B1	99	99.923	ENSEASG00005020159	SF3B1	97	99.923	Equus_asinus_asinus
ENSCLAG00000014767	SF3B1	99	99.923	ENSECAG00000021657	SF3B1	97	99.923	Equus_caballus
ENSCLAG00000014767	SF3B1	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSCLAG00000014767	SF3B1	99	93.085	ENSELUG00000005977	sf3b1	97	92.933	Esox_lucius
ENSCLAG00000014767	SF3B1	99	100.000	ENSFCAG00000005038	SF3B1	99	100.000	Felis_catus
ENSCLAG00000014767	SF3B1	99	99.080	ENSFALG00000004281	SF3B1	99	99.080	Ficedula_albicollis
ENSCLAG00000014767	SF3B1	99	100.000	ENSFDAG00000017510	SF3B1	99	100.000	Fukomys_damarensis
ENSCLAG00000014767	SF3B1	99	92.890	ENSFHEG00000014333	sf3b1	99	92.890	Fundulus_heteroclitus
ENSCLAG00000014767	SF3B1	99	93.487	ENSGMOG00000006773	sf3b1	99	93.487	Gadus_morhua
ENSCLAG00000014767	SF3B1	99	99.382	ENSGALG00000008038	SF3B1	99	99.382	Gallus_gallus
ENSCLAG00000014767	SF3B1	98	93.441	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSCLAG00000014767	SF3B1	99	93.630	ENSGACG00000008839	sf3b1	99	93.630	Gasterosteus_aculeatus
ENSCLAG00000014767	SF3B1	99	99.151	ENSGAGG00000017478	SF3B1	99	99.076	Gopherus_agassizii
ENSCLAG00000014767	SF3B1	99	93.170	ENSGGOG00000009264	SF3B1	99	94.231	Gorilla_gorilla
ENSCLAG00000014767	SF3B1	99	92.874	ENSHBUG00000007705	sf3b1	99	92.720	Haplochromis_burtoni
ENSCLAG00000014767	SF3B1	99	99.616	ENSHGLG00000008285	-	99	99.616	Heterocephalus_glaber_female
ENSCLAG00000014767	SF3B1	99	97.621	ENSHGLG00100005535	-	99	97.621	Heterocephalus_glaber_male
ENSCLAG00000014767	SF3B1	99	93.004	ENSHCOG00000016775	sf3b1	99	92.852	Hippocampus_comes
ENSCLAG00000014767	SF3B1	99	93.956	ENSIPUG00000013171	sf3b1	99	93.956	Ictalurus_punctatus
ENSCLAG00000014767	SF3B1	99	100.000	ENSSTOG00000011034	SF3B1	99	100.000	Ictidomys_tridecemlineatus
ENSCLAG00000014767	SF3B1	99	99.922	ENSJJAG00000010903	Sf3b1	99	99.922	Jaculus_jaculus
ENSCLAG00000014767	SF3B1	99	93.059	ENSKMAG00000004009	sf3b1	99	92.982	Kryptolebias_marmoratus
ENSCLAG00000014767	SF3B1	99	93.543	ENSLBEG00000022208	sf3b1	99	93.390	Labrus_bergylta
ENSCLAG00000014767	SF3B1	99	91.945	ENSLACG00000014832	SF3B1	100	91.945	Latimeria_chalumnae
ENSCLAG00000014767	SF3B1	99	94.882	ENSLOCG00000003899	sf3b1	99	94.729	Lepisosteus_oculatus
ENSCLAG00000014767	SF3B1	99	100.000	ENSLAFG00000001956	SF3B1	99	100.000	Loxodonta_africana
ENSCLAG00000014767	SF3B1	99	100.000	ENSMMUG00000022430	SF3B1	99	99.923	Macaca_mulatta
ENSCLAG00000014767	SF3B1	99	100.000	ENSMNEG00000042333	SF3B1	100	100.000	Macaca_nemestrina
ENSCLAG00000014767	SF3B1	95	93.478	ENSMLEG00000026141	SF3B1	99	94.027	Mandrillus_leucophaeus
ENSCLAG00000014767	SF3B1	99	93.573	ENSMAMG00000010241	sf3b1	99	93.573	Mastacembelus_armatus
ENSCLAG00000014767	SF3B1	99	92.808	ENSMZEG00005021254	sf3b1	99	92.655	Maylandia_zebra
ENSCLAG00000014767	SF3B1	99	98.764	ENSMGAG00000007017	SF3B1	99	98.764	Meleagris_gallopavo
ENSCLAG00000014767	SF3B1	99	95.682	ENSMAUG00000009071	Sf3b1	99	95.682	Mesocricetus_auratus
ENSCLAG00000014767	SF3B1	99	99.923	ENSMICG00000013879	SF3B1	99	99.923	Microcebus_murinus
ENSCLAG00000014767	SF3B1	99	95.158	ENSMOCG00000000455	Sf3b1	100	95.158	Microtus_ochrogaster
ENSCLAG00000014767	SF3B1	84	92.420	ENSMMOG00000000475	sf3b1	100	92.420	Mola_mola
ENSCLAG00000014767	SF3B1	99	99.305	ENSMODG00000012275	SF3B1	99	99.305	Monodelphis_domestica
ENSCLAG00000014767	SF3B1	99	93.497	ENSMALG00000017211	sf3b1	99	93.497	Monopterus_albus
ENSCLAG00000014767	SF3B1	99	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	99	100.000	Mus_caroli
ENSCLAG00000014767	SF3B1	99	100.000	ENSMUSG00000025982	Sf3b1	99	100.000	Mus_musculus
ENSCLAG00000014767	SF3B1	99	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	99	100.000	Mus_spretus
ENSCLAG00000014767	SF3B1	99	100.000	ENSMPUG00000007799	SF3B1	99	100.000	Mustela_putorius_furo
ENSCLAG00000014767	SF3B1	99	98.764	ENSMLUG00000000840	SF3B1	99	98.764	Myotis_lucifugus
ENSCLAG00000014767	SF3B1	99	100.000	ENSNGAG00000021884	-	99	100.000	Nannospalax_galili
ENSCLAG00000014767	SF3B1	99	89.034	ENSNBRG00000015816	sf3b1	99	89.034	Neolamprologus_brichardi
ENSCLAG00000014767	SF3B1	99	100.000	ENSNLEG00000006861	SF3B1	99	100.000	Nomascus_leucogenys
ENSCLAG00000014767	SF3B1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSCLAG00000014767	SF3B1	99	88.031	ENSOPRG00000008596	SF3B1	99	88.031	Ochotona_princeps
ENSCLAG00000014767	SF3B1	99	100.000	ENSODEG00000011153	-	99	100.000	Octodon_degus
ENSCLAG00000014767	SF3B1	99	92.808	ENSONIG00000013758	sf3b1	99	92.655	Oreochromis_niloticus
ENSCLAG00000014767	SF3B1	83	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSCLAG00000014767	SF3B1	99	93.344	ENSORLG00000020219	sf3b1	99	93.344	Oryzias_latipes
ENSCLAG00000014767	SF3B1	99	93.344	ENSORLG00020001746	sf3b1	99	93.344	Oryzias_latipes_hni
ENSCLAG00000014767	SF3B1	63	90.854	ENSORLG00015001759	sf3b1	97	90.854	Oryzias_latipes_hsok
ENSCLAG00000014767	SF3B1	99	93.349	ENSOMEG00000019231	sf3b1	99	93.349	Oryzias_melastigma
ENSCLAG00000014767	SF3B1	99	99.923	ENSOARG00000015374	SF3B1	99	99.923	Ovis_aries
ENSCLAG00000014767	SF3B1	99	100.000	ENSPPAG00000035007	SF3B1	99	100.000	Pan_paniscus
ENSCLAG00000014767	SF3B1	99	100.000	ENSPPRG00000009090	SF3B1	99	100.000	Panthera_pardus
ENSCLAG00000014767	SF3B1	99	100.000	ENSPTIG00000021557	SF3B1	99	100.000	Panthera_tigris_altaica
ENSCLAG00000014767	SF3B1	99	91.455	ENSPTRG00000012771	SF3B1	99	91.455	Pan_troglodytes
ENSCLAG00000014767	SF3B1	99	100.000	ENSPANG00000013417	SF3B1	99	100.000	Papio_anubis
ENSCLAG00000014767	SF3B1	99	95.019	ENSPKIG00000000784	sf3b1	99	94.866	Paramormyrops_kingsleyae
ENSCLAG00000014767	SF3B1	99	97.991	ENSPSIG00000017222	SF3B1	98	97.991	Pelodiscus_sinensis
ENSCLAG00000014767	SF3B1	90	93.973	ENSPMGG00000004330	sf3b1	98	93.803	Periophthalmus_magnuspinnatus
ENSCLAG00000014767	SF3B1	99	100.000	ENSPEMG00000010699	Sf3b1	100	100.000	Peromyscus_maniculatus_bairdii
ENSCLAG00000014767	SF3B1	99	90.214	ENSPMAG00000001311	sf3b1	99	90.367	Petromyzon_marinus
ENSCLAG00000014767	SF3B1	99	99.228	ENSPCIG00000010642	SF3B1	99	99.228	Phascolarctos_cinereus
ENSCLAG00000014767	SF3B1	99	93.277	ENSPFOG00000000073	sf3b1	99	93.277	Poecilia_formosa
ENSCLAG00000014767	SF3B1	99	93.349	ENSPLAG00000002293	sf3b1	99	93.349	Poecilia_latipinna
ENSCLAG00000014767	SF3B1	99	93.349	ENSPMEG00000000446	sf3b1	97	93.349	Poecilia_mexicana
ENSCLAG00000014767	SF3B1	99	93.425	ENSPREG00000019652	sf3b1	99	93.425	Poecilia_reticulata
ENSCLAG00000014767	SF3B1	99	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSCLAG00000014767	SF3B1	99	99.846	ENSPCAG00000009292	SF3B1	99	99.846	Procavia_capensis
ENSCLAG00000014767	SF3B1	99	99.923	ENSPCOG00000024074	SF3B1	99	99.923	Propithecus_coquereli
ENSCLAG00000014767	SF3B1	99	100.000	ENSPVAG00000008302	SF3B1	99	100.000	Pteropus_vampyrus
ENSCLAG00000014767	SF3B1	99	92.808	ENSPNYG00000014939	sf3b1	99	92.655	Pundamilia_nyererei
ENSCLAG00000014767	SF3B1	99	93.956	ENSPNAG00000008288	sf3b1	99	93.956	Pygocentrus_nattereri
ENSCLAG00000014767	SF3B1	99	100.000	ENSRNOG00000013516	Sf3b1	99	100.000	Rattus_norvegicus
ENSCLAG00000014767	SF3B1	99	96.451	ENSRBIG00000026096	SF3B1	99	96.451	Rhinopithecus_bieti
ENSCLAG00000014767	SF3B1	99	100.000	ENSRROG00000031308	SF3B1	99	100.000	Rhinopithecus_roxellana
ENSCLAG00000014767	SF3B1	99	100.000	ENSSBOG00000020080	SF3B1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000014767	SF3B1	99	99.305	ENSSHAG00000017564	SF3B1	99	99.305	Sarcophilus_harrisii
ENSCLAG00000014767	SF3B1	99	94.572	ENSSFOG00015021535	sf3b1	99	94.725	Scleropages_formosus
ENSCLAG00000014767	SF3B1	99	92.906	ENSSMAG00000013977	sf3b1	98	92.754	Scophthalmus_maximus
ENSCLAG00000014767	SF3B1	99	93.344	ENSSDUG00000017422	sf3b1	99	93.344	Seriola_dumerili
ENSCLAG00000014767	SF3B1	99	93.267	ENSSLDG00000019495	sf3b1	99	93.267	Seriola_lalandi_dorsalis
ENSCLAG00000014767	SF3B1	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSCLAG00000014767	SF3B1	99	99.073	ENSSPUG00000000410	SF3B1	99	99.073	Sphenodon_punctatus
ENSCLAG00000014767	SF3B1	99	93.650	ENSSPAG00000010451	sf3b1	98	93.650	Stegastes_partitus
ENSCLAG00000014767	SF3B1	90	99.576	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSCLAG00000014767	SF3B1	99	99.305	ENSTGUG00000010553	SF3B1	99	99.305	Taeniopygia_guttata
ENSCLAG00000014767	SF3B1	100	92.933	ENSTRUG00000015534	sf3b1	100	92.781	Takifugu_rubripes
ENSCLAG00000014767	SF3B1	87	100.000	ENSTBEG00000008714	SF3B1	92	100.000	Tupaia_belangeri
ENSCLAG00000014767	SF3B1	92	94.185	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSCLAG00000014767	SF3B1	94	95.530	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSCLAG00000014767	SF3B1	99	100.000	ENSUMAG00000020945	SF3B1	99	100.000	Ursus_maritimus
ENSCLAG00000014767	SF3B1	99	91.815	ENSVPAG00000005798	SF3B1	99	91.815	Vicugna_pacos
ENSCLAG00000014767	SF3B1	99	100.000	ENSVVUG00000025948	SF3B1	94	100.000	Vulpes_vulpes
ENSCLAG00000014767	SF3B1	99	96.757	ENSXETG00000013339	sf3b1	99	96.757	Xenopus_tropicalis
ENSCLAG00000014767	SF3B1	99	89.838	ENSXCOG00000018086	sf3b1	99	89.724	Xiphophorus_couchianus
ENSCLAG00000014767	SF3B1	99	93.349	ENSXMAG00000007369	sf3b1	99	93.648	Xiphophorus_maculatus