EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000014874 (Gene tree)
Gene ID: 102012554
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 11733 bases
Position: chrJH721955.1:6778993-6790725
Accession: 102012554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000021728	RNA_pol_Rpb5_N	PF03871.14	7.6e-35	1	1
ENSCLAP00000021729	RNA_pol_Rpb5_N	PF03871.14	7.6e-35	1	1
ENSCLAP00000021728	RNA_pol_Rpb5_C	PF01191.19	5.6e-35	1	1
ENSCLAP00000021729	RNA_pol_Rpb5_C	PF01191.19	5.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000021931	-	4416	-	ENSCLAP00000021728	210 (aa)	-	UPI00038EC084
ENSCLAT00000021932	-	4255	XM_005405996	ENSCLAP00000021729	210 (aa)	XP_005406053	UPI00038EC084

Gene Model

Click here to download ENSCLAG00000014874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000014874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000014874	-	98	77.073	ENSCLAG00000009238	-	100	77.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000014874	-	100	99.048	ENSG00000099817	POLR2E	100	99.048	Homo_sapiens
ENSCLAG00000014874	-	100	95.238	ENSAPOG00000002935	polr2eb	100	95.238	Acanthochromis_polyacanthus
ENSCLAG00000014874	-	100	99.524	ENSAMEG00000003159	POLR2E	100	99.524	Ailuropoda_melanoleuca
ENSCLAG00000014874	-	100	82.857	ENSACIG00000024371	polr2eb	100	82.857	Amphilophus_citrinellus
ENSCLAG00000014874	-	100	95.238	ENSAOCG00000018166	polr2eb	100	95.238	Amphiprion_ocellaris
ENSCLAG00000014874	-	100	95.238	ENSAPEG00000009000	polr2eb	100	95.238	Amphiprion_percula
ENSCLAG00000014874	-	100	95.238	ENSATEG00000023760	polr2eb	100	95.238	Anabas_testudineus
ENSCLAG00000014874	-	100	99.524	ENSANAG00000038488	POLR2E	100	99.524	Aotus_nancymaae
ENSCLAG00000014874	-	100	95.714	ENSACLG00000005254	polr2eb	100	95.714	Astatotilapia_calliptera
ENSCLAG00000014874	-	100	95.714	ENSAMXG00000018915	POLR2E	100	95.714	Astyanax_mexicanus
ENSCLAG00000014874	-	100	99.524	ENSBTAG00000020776	POLR2E	100	99.524	Bos_taurus
ENSCLAG00000014874	-	99	78.365	WBGene00019246	rpb-5	99	78.365	Caenorhabditis_elegans
ENSCLAG00000014874	-	67	95.000	ENSCJAG00000007666	-	77	95.000	Callithrix_jacchus
ENSCLAG00000014874	-	100	96.190	ENSCAFG00000019546	POLR2E	100	96.190	Canis_familiaris
ENSCLAG00000014874	-	100	99.524	ENSCAFG00020017111	POLR2E	100	99.524	Canis_lupus_dingo
ENSCLAG00000014874	-	100	99.524	ENSCHIG00000014151	POLR2E	100	99.524	Capra_hircus
ENSCLAG00000014874	-	100	81.905	ENSTSYG00000026377	POLR2E	100	81.905	Carlito_syrichta
ENSCLAG00000014874	-	91	99.479	ENSCAPG00000010843	POLR2E	93	99.479	Cavia_aperea
ENSCLAG00000014874	-	100	99.524	ENSCPOG00000001542	POLR2E	100	99.524	Cavia_porcellus
ENSCLAG00000014874	-	100	99.524	ENSCCAG00000025658	POLR2E	100	99.524	Cebus_capucinus
ENSCLAG00000014874	-	100	99.524	ENSCATG00000008926	POLR2E	100	99.524	Cercocebus_atys
ENSCLAG00000014874	-	100	99.524	ENSCSAG00000012336	POLR2E	100	99.524	Chlorocebus_sabaeus
ENSCLAG00000014874	-	100	99.048	ENSCPBG00000009702	POLR2E	100	99.048	Chrysemys_picta_bellii
ENSCLAG00000014874	-	100	86.190	ENSCING00000024933	-	99	86.190	Ciona_intestinalis
ENSCLAG00000014874	-	100	99.524	ENSCANG00000025560	POLR2E	100	99.524	Colobus_angolensis_palliatus
ENSCLAG00000014874	-	100	98.571	ENSCGRG00001022927	Polr2e	100	98.571	Cricetulus_griseus_chok1gshd
ENSCLAG00000014874	-	100	92.558	ENSCGRG00000016441	Polr2e	100	92.558	Cricetulus_griseus_crigri
ENSCLAG00000014874	-	100	94.286	ENSCSEG00000007107	polr2eb	92	94.286	Cynoglossus_semilaevis
ENSCLAG00000014874	-	100	95.238	ENSCVAG00000019940	polr2eb	100	95.238	Cyprinodon_variegatus
ENSCLAG00000014874	-	100	94.286	ENSDARG00000026183	polr2eb	100	94.286	Danio_rerio
ENSCLAG00000014874	-	90	99.474	ENSDNOG00000044994	POLR2E	84	99.474	Dasypus_novemcinctus
ENSCLAG00000014874	-	100	99.524	ENSDORG00000001154	Polr2e	100	99.524	Dipodomys_ordii
ENSCLAG00000014874	-	99	85.646	FBgn0033571	Rpb5	99	85.646	Drosophila_melanogaster
ENSCLAG00000014874	-	75	91.083	ENSEBUG00000010159	-	76	91.083	Eptatretus_burgeri
ENSCLAG00000014874	-	69	93.103	ENSEASG00005021615	POLR2E	67	87.037	Equus_asinus_asinus
ENSCLAG00000014874	-	91	98.429	ENSECAG00000011124	POLR2E	100	86.667	Equus_caballus
ENSCLAG00000014874	-	100	93.333	ENSELUG00000020646	polr2e	100	93.333	Esox_lucius
ENSCLAG00000014874	-	100	94.286	ENSELUG00000005815	POLR2E	100	94.286	Esox_lucius
ENSCLAG00000014874	-	100	99.048	ENSFCAG00000007318	POLR2E	100	99.048	Felis_catus
ENSCLAG00000014874	-	91	98.958	ENSFALG00000013986	POLR2E	99	98.958	Ficedula_albicollis
ENSCLAG00000014874	-	100	99.524	ENSFDAG00000014539	POLR2E	100	99.524	Fukomys_damarensis
ENSCLAG00000014874	-	100	95.238	ENSFHEG00000022398	polr2eb	100	95.238	Fundulus_heteroclitus
ENSCLAG00000014874	-	100	94.286	ENSGMOG00000007615	polr2eb	100	94.286	Gadus_morhua
ENSCLAG00000014874	-	100	99.048	ENSGALG00000002591	POLR2E	100	99.048	Gallus_gallus
ENSCLAG00000014874	-	100	95.714	ENSGAFG00000005087	polr2eb	100	95.714	Gambusia_affinis
ENSCLAG00000014874	-	100	94.286	ENSGACG00000013247	polr2eb	100	94.286	Gasterosteus_aculeatus
ENSCLAG00000014874	-	100	99.048	ENSGAGG00000008356	POLR2E	100	99.048	Gopherus_agassizii
ENSCLAG00000014874	-	100	99.524	ENSGGOG00000011267	POLR2E	100	99.524	Gorilla_gorilla
ENSCLAG00000014874	-	68	89.437	ENSHBUG00000011099	polr2eb	100	89.437	Haplochromis_burtoni
ENSCLAG00000014874	-	100	98.571	ENSHGLG00000013330	POLR2E	100	98.571	Heterocephalus_glaber_female
ENSCLAG00000014874	-	100	98.571	ENSHGLG00100011014	POLR2E	100	98.571	Heterocephalus_glaber_male
ENSCLAG00000014874	-	100	93.810	ENSHCOG00000000906	polr2eb	100	93.810	Hippocampus_comes
ENSCLAG00000014874	-	53	91.964	ENSHCOG00000012099	-	88	91.964	Hippocampus_comes
ENSCLAG00000014874	-	100	95.238	ENSIPUG00000019801	polr2e	100	95.238	Ictalurus_punctatus
ENSCLAG00000014874	-	100	99.524	ENSSTOG00000002853	POLR2E	100	99.524	Ictidomys_tridecemlineatus
ENSCLAG00000014874	-	77	80.745	ENSJJAG00000015812	-	100	80.745	Jaculus_jaculus
ENSCLAG00000014874	-	100	79.524	ENSJJAG00000003145	-	100	79.524	Jaculus_jaculus
ENSCLAG00000014874	-	100	98.571	ENSJJAG00000016595	-	100	98.571	Jaculus_jaculus
ENSCLAG00000014874	-	100	95.238	ENSKMAG00000005954	polr2eb	100	95.238	Kryptolebias_marmoratus
ENSCLAG00000014874	-	100	95.238	ENSLBEG00000024802	polr2eb	100	95.238	Labrus_bergylta
ENSCLAG00000014874	-	100	95.238	ENSLACG00000013686	POLR2E	100	95.238	Latimeria_chalumnae
ENSCLAG00000014874	-	77	96.296	ENSLOCG00000004599	POLR2E	100	96.296	Lepisosteus_oculatus
ENSCLAG00000014874	-	100	79.717	ENSLAFG00000025587	POLR2E	100	79.717	Loxodonta_africana
ENSCLAG00000014874	-	100	99.524	ENSMFAG00000002884	POLR2E	100	99.524	Macaca_fascicularis
ENSCLAG00000014874	-	100	99.524	ENSMMUG00000013927	POLR2E	100	99.524	Macaca_mulatta
ENSCLAG00000014874	-	100	65.877	ENSMNEG00000033452	-	100	65.877	Macaca_nemestrina
ENSCLAG00000014874	-	100	99.524	ENSMNEG00000034046	-	100	99.524	Macaca_nemestrina
ENSCLAG00000014874	-	92	80.829	ENSMLEG00000012405	POLR2E	94	80.829	Mandrillus_leucophaeus
ENSCLAG00000014874	-	100	95.238	ENSMAMG00000018703	polr2eb	100	95.238	Mastacembelus_armatus
ENSCLAG00000014874	-	90	95.263	ENSMZEG00005010796	polr2eb	96	95.263	Maylandia_zebra
ENSCLAG00000014874	-	100	97.630	ENSMGAG00000003769	POLR2E	100	97.630	Meleagris_gallopavo
ENSCLAG00000014874	-	92	97.927	ENSMAUG00000010125	-	100	98.429	Mesocricetus_auratus
ENSCLAG00000014874	-	100	67.143	ENSMAUG00000011003	-	100	67.143	Mesocricetus_auratus
ENSCLAG00000014874	-	100	99.524	ENSMICG00000013063	POLR2E	100	99.524	Microcebus_murinus
ENSCLAG00000014874	-	100	98.571	ENSMOCG00000013414	Polr2e	100	98.571	Microtus_ochrogaster
ENSCLAG00000014874	-	100	80.952	ENSMMOG00000001161	polr2eb	100	80.952	Mola_mola
ENSCLAG00000014874	-	91	85.864	ENSMMOG00000001167	polr2eb	88	85.864	Mola_mola
ENSCLAG00000014874	-	100	99.048	ENSMODG00000005494	POLR2E	100	99.048	Monodelphis_domestica
ENSCLAG00000014874	-	100	95.714	ENSMALG00000021888	polr2eb	100	95.714	Monopterus_albus
ENSCLAG00000014874	-	100	98.571	MGP_CAROLIEiJ_G0015561	Polr2e	100	98.571	Mus_caroli
ENSCLAG00000014874	-	100	98.571	ENSMUSG00000004667	Polr2e	100	98.571	Mus_musculus
ENSCLAG00000014874	-	100	98.571	MGP_PahariEiJ_G0030974	Polr2e	100	98.571	Mus_pahari
ENSCLAG00000014874	-	100	98.571	MGP_SPRETEiJ_G0016379	Polr2e	100	98.571	Mus_spretus
ENSCLAG00000014874	-	100	98.571	ENSMPUG00000008953	POLR2E	100	98.571	Mustela_putorius_furo
ENSCLAG00000014874	-	100	99.524	ENSMLUG00000013193	POLR2E	100	99.524	Myotis_lucifugus
ENSCLAG00000014874	-	66	94.203	ENSMLUG00000006376	-	100	82.716	Myotis_lucifugus
ENSCLAG00000014874	-	85	73.743	ENSNGAG00000017344	-	96	73.743	Nannospalax_galili
ENSCLAG00000014874	-	100	98.571	ENSNGAG00000001147	Polr2e	100	98.571	Nannospalax_galili
ENSCLAG00000014874	-	100	82.857	ENSNBRG00000022772	polr2eb	100	82.857	Neolamprologus_brichardi
ENSCLAG00000014874	-	100	75.714	ENSNLEG00000031364	-	100	75.714	Nomascus_leucogenys
ENSCLAG00000014874	-	100	95.735	ENSNLEG00000001207	-	100	95.735	Nomascus_leucogenys
ENSCLAG00000014874	-	100	86.667	ENSOPRG00000008331	POLR2E	100	86.667	Ochotona_princeps
ENSCLAG00000014874	-	100	99.524	ENSODEG00000013230	-	100	99.524	Octodon_degus
ENSCLAG00000014874	-	100	72.381	ENSODEG00000011490	-	100	72.381	Octodon_degus
ENSCLAG00000014874	-	89	88.172	ENSODEG00000007985	-	100	88.172	Octodon_degus
ENSCLAG00000014874	-	100	95.238	ENSONIG00000002519	polr2eb	100	95.238	Oreochromis_niloticus
ENSCLAG00000014874	-	100	95.714	ENSORLG00000015346	polr2eb	100	95.714	Oryzias_latipes
ENSCLAG00000014874	-	100	95.714	ENSORLG00020020700	polr2e	100	95.714	Oryzias_latipes_hni
ENSCLAG00000014874	-	100	95.714	ENSORLG00015016842	polr2e	100	95.714	Oryzias_latipes_hsok
ENSCLAG00000014874	-	100	95.238	ENSOMEG00000002709	polr2eb	100	95.238	Oryzias_melastigma
ENSCLAG00000014874	-	100	99.524	ENSOGAG00000012311	POLR2E	100	99.524	Otolemur_garnettii
ENSCLAG00000014874	-	100	99.524	ENSOARG00000010994	POLR2E	100	99.524	Ovis_aries
ENSCLAG00000014874	-	91	99.476	ENSPPAG00000003145	POLR2E	100	99.476	Pan_paniscus
ENSCLAG00000014874	-	100	99.048	ENSPPRG00000000777	POLR2E	100	99.048	Panthera_pardus
ENSCLAG00000014874	-	91	77.083	ENSPTIG00000012237	POLR2E	98	93.421	Panthera_tigris_altaica
ENSCLAG00000014874	-	100	99.524	ENSPTRG00000010183	POLR2E	100	99.524	Pan_troglodytes
ENSCLAG00000014874	-	100	99.524	ENSPANG00000018011	POLR2E	100	99.524	Papio_anubis
ENSCLAG00000014874	-	100	95.238	ENSPKIG00000024123	POLR2E	100	95.238	Paramormyrops_kingsleyae
ENSCLAG00000014874	-	100	94.286	ENSPKIG00000009607	POLR2E	100	94.286	Paramormyrops_kingsleyae
ENSCLAG00000014874	-	98	95.122	ENSPSIG00000002870	POLR2E	99	95.122	Pelodiscus_sinensis
ENSCLAG00000014874	-	100	82.381	ENSPMGG00000014354	polr2eb	100	82.381	Periophthalmus_magnuspinnatus
ENSCLAG00000014874	-	100	98.571	ENSPEMG00000023261	Polr2e	100	98.571	Peromyscus_maniculatus_bairdii
ENSCLAG00000014874	-	90	98.942	ENSPCIG00000007312	POLR2E	75	98.942	Phascolarctos_cinereus
ENSCLAG00000014874	-	100	95.714	ENSPFOG00000005734	polr2eb	100	95.714	Poecilia_formosa
ENSCLAG00000014874	-	100	95.714	ENSPLAG00000014496	polr2eb	100	95.714	Poecilia_latipinna
ENSCLAG00000014874	-	100	95.714	ENSPMEG00000008053	polr2eb	100	95.714	Poecilia_mexicana
ENSCLAG00000014874	-	100	95.714	ENSPREG00000006489	polr2eb	100	95.714	Poecilia_reticulata
ENSCLAG00000014874	-	100	92.417	ENSPPYG00000009305	POLR2E	100	92.417	Pongo_abelii
ENSCLAG00000014874	-	53	99.099	ENSPCAG00000016605	POLR2E	100	99.099	Procavia_capensis
ENSCLAG00000014874	-	100	99.524	ENSPCOG00000014491	POLR2E	100	99.524	Propithecus_coquereli
ENSCLAG00000014874	-	65	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSCLAG00000014874	-	90	95.263	ENSPNYG00000019797	polr2eb	96	95.263	Pundamilia_nyererei
ENSCLAG00000014874	-	100	96.190	ENSPNAG00000026263	POLR2E	100	96.190	Pygocentrus_nattereri
ENSCLAG00000014874	-	100	98.571	ENSRNOG00000013545	Polr2e	100	98.571	Rattus_norvegicus
ENSCLAG00000014874	-	100	73.460	ENSRBIG00000027259	-	100	73.460	Rhinopithecus_bieti
ENSCLAG00000014874	-	100	99.524	ENSRBIG00000028726	-	100	99.524	Rhinopithecus_bieti
ENSCLAG00000014874	-	100	99.524	ENSRROG00000043763	POLR2E	100	99.524	Rhinopithecus_roxellana
ENSCLAG00000014874	-	99	43.578	YBR154C	RPB5	98	43.578	Saccharomyces_cerevisiae
ENSCLAG00000014874	-	100	99.524	ENSSBOG00000027241	POLR2E	100	99.524	Saimiri_boliviensis_boliviensis
ENSCLAG00000014874	-	100	99.048	ENSSHAG00000010690	POLR2E	100	99.048	Sarcophilus_harrisii
ENSCLAG00000014874	-	100	95.238	ENSSFOG00015006073	polr2e	100	95.238	Scleropages_formosus
ENSCLAG00000014874	-	100	95.238	ENSSMAG00000012782	polr2eb	100	95.238	Scophthalmus_maximus
ENSCLAG00000014874	-	100	95.238	ENSSDUG00000003352	polr2eb	100	95.238	Seriola_dumerili
ENSCLAG00000014874	-	100	95.238	ENSSLDG00000004965	polr2eb	100	95.238	Seriola_lalandi_dorsalis
ENSCLAG00000014874	-	100	97.619	ENSSPUG00000006114	POLR2E	100	97.619	Sphenodon_punctatus
ENSCLAG00000014874	-	100	95.238	ENSSPAG00000017556	polr2eb	100	95.238	Stegastes_partitus
ENSCLAG00000014874	-	100	99.524	ENSSSCG00000021472	POLR2E	100	99.524	Sus_scrofa
ENSCLAG00000014874	-	66	90.000	ENSTGUG00000000922	POLR2E	99	90.000	Taeniopygia_guttata
ENSCLAG00000014874	-	96	90.547	ENSTRUG00000018238	polr2eb	100	82.381	Takifugu_rubripes
ENSCLAG00000014874	-	100	95.238	ENSTNIG00000013187	polr2eb	100	95.238	Tetraodon_nigroviridis
ENSCLAG00000014874	-	100	99.048	ENSTTRG00000001484	POLR2E	100	99.048	Tursiops_truncatus
ENSCLAG00000014874	-	92	96.392	ENSUAMG00000009166	POLR2E	100	86.190	Ursus_americanus
ENSCLAG00000014874	-	100	99.524	ENSVVUG00000022818	POLR2E	54	99.524	Vulpes_vulpes
ENSCLAG00000014874	-	100	97.143	ENSXETG00000003291	polr2e	100	97.143	Xenopus_tropicalis
ENSCLAG00000014874	-	100	82.857	ENSXCOG00000009197	polr2eb	100	82.857	Xiphophorus_couchianus
ENSCLAG00000014874	-	100	95.714	ENSXMAG00000026495	polr2eb	100	95.714	Xiphophorus_maculatus