EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000015009 (Gene tree)
Gene ID: 102015301
Gene Symbol: PRPF3
Alias: Prp3|RP18|SNRNP90|hPrp3
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 26205 bases
Position: chrJH721873.1:429259-455463
Accession: 102015301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000021903	PRP3	PF08572.10	1.8e-79	1	1
ENSCLAP00000021904	PRP3	PF08572.10	1.8e-79	1	1
ENSCLAP00000021903	PWI	PF01480.17	2.8e-13	1	1
ENSCLAP00000021904	PWI	PF01480.17	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000022107	PRPF3-201	2724	XM_005378687	ENSCLAP00000021903	683 (aa)	XP_005378744	UPI00038EEA0D
ENSCLAT00000022109	PRPF3-203	345	-	ENSCLAP00000021905	114 (aa)	-	-
ENSCLAT00000022108	PRPF3-202	2242	XM_005378686	ENSCLAP00000021904	683 (aa)	XP_005378743	UPI00038EEA0D

Gene Model

Click here to download ENSCLAG00000015009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000015009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000015009	PRPF3	100	99.854	ENSG00000117360	PRPF3	100	99.854	Homo_sapiens
ENSCLAG00000015009	PRPF3	100	71.893	ENSAPOG00000015584	prpf3	99	72.458	Acanthochromis_polyacanthus
ENSCLAG00000015009	PRPF3	100	99.707	ENSAMEG00000001630	PRPF3	100	99.707	Ailuropoda_melanoleuca
ENSCLAG00000015009	PRPF3	100	72.136	ENSACIG00000007876	prpf3	99	71.146	Amphilophus_citrinellus
ENSCLAG00000015009	PRPF3	100	71.186	ENSAOCG00000011449	prpf3	99	72.404	Amphiprion_ocellaris
ENSCLAG00000015009	PRPF3	100	71.408	ENSATEG00000023583	prpf3	99	71.835	Anabas_testudineus
ENSCLAG00000015009	PRPF3	100	94.883	ENSAPLG00000002440	PRPF3	100	94.883	Anas_platyrhynchos
ENSCLAG00000015009	PRPF3	100	92.431	ENSACAG00000003176	PRPF3	100	92.722	Anolis_carolinensis
ENSCLAG00000015009	PRPF3	100	99.854	ENSANAG00000026138	PRPF3	100	99.854	Aotus_nancymaae
ENSCLAG00000015009	PRPF3	100	72.439	ENSACLG00000020127	prpf3	99	72.150	Astatotilapia_calliptera
ENSCLAG00000015009	PRPF3	100	73.944	ENSAMXG00000007306	prpf3	99	73.521	Astyanax_mexicanus
ENSCLAG00000015009	PRPF3	100	99.854	ENSBTAG00000013946	PRPF3	100	99.854	Bos_taurus
ENSCLAG00000015009	PRPF3	81	38.790	WBGene00010844	prp-3	82	38.929	Caenorhabditis_elegans
ENSCLAG00000015009	PRPF3	100	99.854	ENSCJAG00000009926	PRPF3	100	99.854	Callithrix_jacchus
ENSCLAG00000015009	PRPF3	100	99.854	ENSCAFG00000011820	PRPF3	100	99.854	Canis_familiaris
ENSCLAG00000015009	PRPF3	80	99.817	ENSCAFG00020019653	PRPF3	100	99.817	Canis_lupus_dingo
ENSCLAG00000015009	PRPF3	100	99.854	ENSCHIG00000015434	PRPF3	100	99.854	Capra_hircus
ENSCLAG00000015009	PRPF3	100	99.561	ENSTSYG00000001383	PRPF3	100	99.561	Carlito_syrichta
ENSCLAG00000015009	PRPF3	93	83.019	ENSCAPG00000017812	PRPF3	95	83.019	Cavia_aperea
ENSCLAG00000015009	PRPF3	100	99.707	ENSCPOG00000008068	PRPF3	100	99.707	Cavia_porcellus
ENSCLAG00000015009	PRPF3	100	99.854	ENSCCAG00000026380	PRPF3	100	99.854	Cebus_capucinus
ENSCLAG00000015009	PRPF3	100	84.448	ENSCATG00000041778	PRPF3	100	84.448	Cercocebus_atys
ENSCLAG00000015009	PRPF3	77	100.000	ENSCHOG00000011645	PRPF3	77	100.000	Choloepus_hoffmanni
ENSCLAG00000015009	PRPF3	100	96.199	ENSCPBG00000008216	PRPF3	100	96.199	Chrysemys_picta_bellii
ENSCLAG00000015009	PRPF3	61	59.189	ENSCING00000003312	-	99	58.711	Ciona_intestinalis
ENSCLAG00000015009	PRPF3	83	54.035	ENSCSAVG00000008720	-	94	54.792	Ciona_savignyi
ENSCLAG00000015009	PRPF3	100	99.122	ENSCANG00000036769	PRPF3	100	99.122	Colobus_angolensis_palliatus
ENSCLAG00000015009	PRPF3	100	99.854	ENSCGRG00001019100	Prpf3	100	99.854	Cricetulus_griseus_chok1gshd
ENSCLAG00000015009	PRPF3	100	99.854	ENSCGRG00000007322	Prpf3	100	99.854	Cricetulus_griseus_crigri
ENSCLAG00000015009	PRPF3	100	72.152	ENSCSEG00000002532	prpf3	99	70.745	Cynoglossus_semilaevis
ENSCLAG00000015009	PRPF3	100	72.766	ENSCVAG00000009318	prpf3	99	72.482	Cyprinodon_variegatus
ENSCLAG00000015009	PRPF3	100	73.115	ENSDARG00000086425	prpf3	99	72.831	Danio_rerio
ENSCLAG00000015009	PRPF3	100	89.605	ENSDNOG00000005904	PRPF3	100	90.776	Dasypus_novemcinctus
ENSCLAG00000015009	PRPF3	93	99.527	ENSDORG00000008664	Prpf3	100	99.527	Dipodomys_ordii
ENSCLAG00000015009	PRPF3	81	53.086	FBgn0036915	Prp3	99	53.273	Drosophila_melanogaster
ENSCLAG00000015009	PRPF3	100	98.389	ENSETEG00000019124	PRPF3	100	98.389	Echinops_telfairi
ENSCLAG00000015009	PRPF3	100	63.934	ENSEBUG00000011680	prpf3	99	63.934	Eptatretus_burgeri
ENSCLAG00000015009	PRPF3	100	99.707	ENSEASG00005001566	PRPF3	100	99.707	Equus_asinus_asinus
ENSCLAG00000015009	PRPF3	100	99.854	ENSECAG00000019840	PRPF3	100	99.854	Equus_caballus
ENSCLAG00000015009	PRPF3	85	99.291	ENSEEUG00000007338	PRPF3	85	99.291	Erinaceus_europaeus
ENSCLAG00000015009	PRPF3	100	66.049	ENSELUG00000013624	prpf3	99	66.476	Esox_lucius
ENSCLAG00000015009	PRPF3	100	99.854	ENSFCAG00000013940	PRPF3	100	99.854	Felis_catus
ENSCLAG00000015009	PRPF3	100	99.561	ENSFDAG00000010365	PRPF3	100	99.561	Fukomys_damarensis
ENSCLAG00000015009	PRPF3	100	73.276	ENSFHEG00000021746	prpf3	99	72.989	Fundulus_heteroclitus
ENSCLAG00000015009	PRPF3	100	71.429	ENSGMOG00000008535	prpf3	99	71.287	Gadus_morhua
ENSCLAG00000015009	PRPF3	100	94.737	ENSGALG00000028205	PRPF3	100	94.737	Gallus_gallus
ENSCLAG00000015009	PRPF3	100	72.493	ENSGAFG00000012671	prpf3	99	72.206	Gambusia_affinis
ENSCLAG00000015009	PRPF3	100	71.105	ENSGACG00000011792	prpf3	99	71.388	Gasterosteus_aculeatus
ENSCLAG00000015009	PRPF3	100	95.906	ENSGAGG00000013765	PRPF3	100	95.628	Gopherus_agassizii
ENSCLAG00000015009	PRPF3	86	99.704	ENSGGOG00000013174	PRPF3	100	99.704	Gorilla_gorilla
ENSCLAG00000015009	PRPF3	100	72.872	ENSHBUG00000003493	prpf3	99	72.583	Haplochromis_burtoni
ENSCLAG00000015009	PRPF3	100	99.707	ENSHGLG00000016569	PRPF3	100	99.707	Heterocephalus_glaber_female
ENSCLAG00000015009	PRPF3	100	70.278	ENSHGLG00000016033	-	100	70.864	Heterocephalus_glaber_female
ENSCLAG00000015009	PRPF3	100	99.707	ENSHGLG00100007590	PRPF3	100	99.707	Heterocephalus_glaber_male
ENSCLAG00000015009	PRPF3	100	70.864	ENSHGLG00100008951	-	95	90.909	Heterocephalus_glaber_male
ENSCLAG00000015009	PRPF3	100	68.706	ENSHCOG00000014058	prpf3	99	68.421	Hippocampus_comes
ENSCLAG00000015009	PRPF3	100	73.609	ENSIPUG00000000902	PRPF3	99	73.932	Ictalurus_punctatus
ENSCLAG00000015009	PRPF3	100	99.854	ENSSTOG00000001889	PRPF3	100	99.854	Ictidomys_tridecemlineatus
ENSCLAG00000015009	PRPF3	100	71.023	ENSKMAG00000001390	prpf3	99	70.739	Kryptolebias_marmoratus
ENSCLAG00000015009	PRPF3	100	70.407	ENSLBEG00000026310	prpf3	99	71.328	Labrus_bergylta
ENSCLAG00000015009	PRPF3	93	82.575	ENSLACG00000010541	PRPF3	100	82.732	Latimeria_chalumnae
ENSCLAG00000015009	PRPF3	100	99.561	ENSLAFG00000004713	PRPF3	100	99.561	Loxodonta_africana
ENSCLAG00000015009	PRPF3	100	99.854	ENSMFAG00000039791	PRPF3	100	99.854	Macaca_fascicularis
ENSCLAG00000015009	PRPF3	90	99.837	ENSMMUG00000016301	PRPF3	98	99.837	Macaca_mulatta
ENSCLAG00000015009	PRPF3	100	99.854	ENSMNEG00000038161	PRPF3	100	99.854	Macaca_nemestrina
ENSCLAG00000015009	PRPF3	86	99.704	ENSMLEG00000040609	PRPF3	100	99.704	Mandrillus_leucophaeus
ENSCLAG00000015009	PRPF3	99	67.109	ENSMLEG00000041065	-	98	66.519	Mandrillus_leucophaeus
ENSCLAG00000015009	PRPF3	100	72.096	ENSMAMG00000014968	prpf3	99	71.955	Mastacembelus_armatus
ENSCLAG00000015009	PRPF3	100	70.827	ENSMZEG00005015970	prpf3	99	70.506	Maylandia_zebra
ENSCLAG00000015009	PRPF3	100	94.737	ENSMGAG00000000707	PRPF3	100	94.737	Meleagris_gallopavo
ENSCLAG00000015009	PRPF3	100	99.561	ENSMAUG00000017112	Prpf3	100	99.561	Mesocricetus_auratus
ENSCLAG00000015009	PRPF3	100	99.561	ENSMICG00000015386	PRPF3	100	99.561	Microcebus_murinus
ENSCLAG00000015009	PRPF3	100	99.707	ENSMOCG00000000242	Prpf3	100	99.707	Microtus_ochrogaster
ENSCLAG00000015009	PRPF3	100	66.385	ENSMMOG00000016131	prpf3	99	67.376	Mola_mola
ENSCLAG00000015009	PRPF3	100	98.243	ENSMODG00000018774	PRPF3	100	98.243	Monodelphis_domestica
ENSCLAG00000015009	PRPF3	100	70.571	ENSMALG00000007257	prpf3	99	70.571	Monopterus_albus
ENSCLAG00000015009	PRPF3	100	99.414	MGP_CAROLIEiJ_G0025354	Prpf3	100	99.414	Mus_caroli
ENSCLAG00000015009	PRPF3	100	99.414	ENSMUSG00000015748	Prpf3	100	99.414	Mus_musculus
ENSCLAG00000015009	PRPF3	100	99.268	MGP_PahariEiJ_G0026798	Prpf3	100	99.268	Mus_pahari
ENSCLAG00000015009	PRPF3	100	99.414	MGP_SPRETEiJ_G0026298	Prpf3	100	99.414	Mus_spretus
ENSCLAG00000015009	PRPF3	100	96.486	ENSMPUG00000005080	PRPF3	100	96.486	Mustela_putorius_furo
ENSCLAG00000015009	PRPF3	100	99.123	ENSMLUG00000004646	-	100	99.123	Myotis_lucifugus
ENSCLAG00000015009	PRPF3	100	99.854	ENSNGAG00000000910	Prpf3	100	99.854	Nannospalax_galili
ENSCLAG00000015009	PRPF3	100	70.670	ENSNBRG00000003462	prpf3	99	70.391	Neolamprologus_brichardi
ENSCLAG00000015009	PRPF3	90	99.837	ENSNLEG00000009841	PRPF3	100	99.837	Nomascus_leucogenys
ENSCLAG00000015009	PRPF3	83	100.000	ENSMEUG00000008733	PRPF3	89	100.000	Notamacropus_eugenii
ENSCLAG00000015009	PRPF3	100	99.268	ENSOPRG00000010139	PRPF3	100	99.268	Ochotona_princeps
ENSCLAG00000015009	PRPF3	100	99.414	ENSODEG00000011363	-	100	99.414	Octodon_degus
ENSCLAG00000015009	PRPF3	100	73.768	ENSODEG00000014412	-	100	73.768	Octodon_degus
ENSCLAG00000015009	PRPF3	100	70.787	ENSONIG00000006394	prpf3	99	70.646	Oreochromis_niloticus
ENSCLAG00000015009	PRPF3	100	65.462	ENSOANG00000015441	PRPF3	100	65.262	Ornithorhynchus_anatinus
ENSCLAG00000015009	PRPF3	100	99.854	ENSOCUG00000011760	PRPF3	100	99.854	Oryctolagus_cuniculus
ENSCLAG00000015009	PRPF3	100	72.792	ENSORLG00000010330	prpf3	99	71.897	Oryzias_latipes
ENSCLAG00000015009	PRPF3	100	72.792	ENSORLG00020009054	prpf3	99	71.897	Oryzias_latipes_hni
ENSCLAG00000015009	PRPF3	100	72.585	ENSORLG00015015016	prpf3	99	71.733	Oryzias_latipes_hsok
ENSCLAG00000015009	PRPF3	100	72.206	ENSOMEG00000000940	prpf3	99	71.920	Oryzias_melastigma
ENSCLAG00000015009	PRPF3	100	93.860	ENSOGAG00000005352	PRPF3	100	93.860	Otolemur_garnettii
ENSCLAG00000015009	PRPF3	100	99.854	ENSOARG00000020798	PRPF3	100	99.854	Ovis_aries
ENSCLAG00000015009	PRPF3	100	99.707	ENSPPAG00000030983	PRPF3	100	99.707	Pan_paniscus
ENSCLAG00000015009	PRPF3	99	76.113	ENSPPAG00000043769	-	99	75.668	Pan_paniscus
ENSCLAG00000015009	PRPF3	100	99.854	ENSPPRG00000000731	PRPF3	100	99.854	Panthera_pardus
ENSCLAG00000015009	PRPF3	100	99.854	ENSPTIG00000005516	PRPF3	100	99.854	Panthera_tigris_altaica
ENSCLAG00000015009	PRPF3	99	75.223	ENSPTRG00000047819	-	99	74.777	Pan_troglodytes
ENSCLAG00000015009	PRPF3	100	99.854	ENSPTRG00000001254	PRPF3	100	99.854	Pan_troglodytes
ENSCLAG00000015009	PRPF3	100	99.707	ENSPANG00000000499	PRPF3	100	99.707	Papio_anubis
ENSCLAG00000015009	PRPF3	100	74.465	ENSPKIG00000010501	prpf3	99	74.608	Paramormyrops_kingsleyae
ENSCLAG00000015009	PRPF3	100	95.906	ENSPSIG00000014877	PRPF3	100	95.760	Pelodiscus_sinensis
ENSCLAG00000015009	PRPF3	100	67.583	ENSPMGG00000007776	prpf3	99	66.715	Periophthalmus_magnuspinnatus
ENSCLAG00000015009	PRPF3	100	99.854	ENSPEMG00000011672	Prpf3	100	99.854	Peromyscus_maniculatus_bairdii
ENSCLAG00000015009	PRPF3	63	72.146	ENSPMAG00000005588	prpf3	99	69.757	Petromyzon_marinus
ENSCLAG00000015009	PRPF3	100	98.243	ENSPCIG00000008795	PRPF3	100	98.243	Phascolarctos_cinereus
ENSCLAG00000015009	PRPF3	100	72.521	ENSPFOG00000013638	prpf3	99	71.955	Poecilia_formosa
ENSCLAG00000015009	PRPF3	100	72.923	ENSPLAG00000018103	prpf3	99	72.301	Poecilia_latipinna
ENSCLAG00000015009	PRPF3	100	72.636	ENSPMEG00000023546	prpf3	99	72.350	Poecilia_mexicana
ENSCLAG00000015009	PRPF3	100	72.429	ENSPREG00000017216	prpf3	99	72.143	Poecilia_reticulata
ENSCLAG00000015009	PRPF3	75	87.354	ENSPPYG00000018646	-	100	87.354	Pongo_abelii
ENSCLAG00000015009	PRPF3	93	99.843	ENSPPYG00000000900	PRPF3	99	99.843	Pongo_abelii
ENSCLAG00000015009	PRPF3	87	99.154	ENSPCAG00000014908	PRPF3	87	99.154	Procavia_capensis
ENSCLAG00000015009	PRPF3	100	99.707	ENSPCOG00000013828	PRPF3	100	99.707	Propithecus_coquereli
ENSCLAG00000015009	PRPF3	100	98.682	ENSPVAG00000013472	PRPF3	100	98.682	Pteropus_vampyrus
ENSCLAG00000015009	PRPF3	100	72.872	ENSPNYG00000004279	prpf3	99	72.583	Pundamilia_nyererei
ENSCLAG00000015009	PRPF3	100	73.239	ENSPNAG00000001799	prpf3	99	73.380	Pygocentrus_nattereri
ENSCLAG00000015009	PRPF3	100	99.268	ENSRNOG00000025629	Prpf3	100	99.268	Rattus_norvegicus
ENSCLAG00000015009	PRPF3	83	96.454	ENSRBIG00000028854	PRPF3	98	96.454	Rhinopithecus_bieti
ENSCLAG00000015009	PRPF3	100	99.854	ENSRROG00000027464	PRPF3	100	99.854	Rhinopithecus_roxellana
ENSCLAG00000015009	PRPF3	100	92.826	ENSSBOG00000033104	PRPF3	100	92.826	Saimiri_boliviensis_boliviensis
ENSCLAG00000015009	PRPF3	100	98.099	ENSSHAG00000009548	PRPF3	100	98.099	Sarcophilus_harrisii
ENSCLAG00000015009	PRPF3	100	73.803	ENSSFOG00015022014	prpf3	99	73.380	Scleropages_formosus
ENSCLAG00000015009	PRPF3	100	72.090	ENSSMAG00000015739	prpf3	99	71.809	Scophthalmus_maximus
ENSCLAG00000015009	PRPF3	100	69.010	ENSSDUG00000006840	prpf3	99	69.010	Seriola_dumerili
ENSCLAG00000015009	PRPF3	100	70.909	ENSSLDG00000015423	prpf3	99	71.189	Seriola_lalandi_dorsalis
ENSCLAG00000015009	PRPF3	100	99.268	ENSSARG00000011064	PRPF3	100	99.268	Sorex_araneus
ENSCLAG00000015009	PRPF3	100	92.507	ENSSPUG00000000809	PRPF3	100	92.507	Sphenodon_punctatus
ENSCLAG00000015009	PRPF3	100	71.208	ENSSPAG00000018721	prpf3	99	72.136	Stegastes_partitus
ENSCLAG00000015009	PRPF3	100	99.854	ENSSSCG00000030119	PRPF3	100	99.854	Sus_scrofa
ENSCLAG00000015009	PRPF3	100	80.848	ENSTGUG00000004552	PRPF3	100	80.848	Taeniopygia_guttata
ENSCLAG00000015009	PRPF3	100	72.069	ENSTRUG00000014923	prpf3	99	71.780	Takifugu_rubripes
ENSCLAG00000015009	PRPF3	100	72.766	ENSTNIG00000008058	prpf3	100	71.591	Tetraodon_nigroviridis
ENSCLAG00000015009	PRPF3	82	100.000	ENSTBEG00000014072	PRPF3	88	100.000	Tupaia_belangeri
ENSCLAG00000015009	PRPF3	100	93.558	ENSTTRG00000010616	PRPF3	100	93.558	Tursiops_truncatus
ENSCLAG00000015009	PRPF3	80	99.818	ENSUAMG00000009345	PRPF3	100	99.818	Ursus_americanus
ENSCLAG00000015009	PRPF3	100	99.854	ENSUMAG00000003720	PRPF3	100	99.854	Ursus_maritimus
ENSCLAG00000015009	PRPF3	89	100.000	ENSVPAG00000005425	PRPF3	89	100.000	Vicugna_pacos
ENSCLAG00000015009	PRPF3	100	99.854	ENSVVUG00000007933	PRPF3	100	99.854	Vulpes_vulpes
ENSCLAG00000015009	PRPF3	100	87.663	ENSXETG00000018654	prpf3	100	87.663	Xenopus_tropicalis
ENSCLAG00000015009	PRPF3	100	72.636	ENSXMAG00000016347	prpf3	99	72.017	Xiphophorus_maculatus