EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000015295 (Gene tree)
Gene ID: 102029616
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 9073 bases
Position: chrJH721875.1:32126444-32135516
Accession: 102029616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000022305	zf-CCCH	PF00642.24	4.8e-06	1	1
ENSCLAP00000022307	zf-CCCH	PF00642.24	4.8e-06	1	1
ENSCLAP00000022306	zf-CCCH	PF00642.24	5e-06	1	1
ENSCLAP00000022304	zf-CCCH	PF00642.24	5.2e-06	1	1
ENSCLAP00000022304	TRM	PF02005.16	5.6e-148	1	1
ENSCLAP00000022305	TRM	PF02005.16	6.8e-143	1	1
ENSCLAP00000022306	TRM	PF02005.16	7.3e-143	1	1
ENSCLAP00000022307	TRM	PF02005.16	2.1e-134	1	1
ENSCLAP00000022307	Met_10	PF02475.16	1.5e-06	1	1
ENSCLAP00000022305	Met_10	PF02475.16	1.5e-06	1	1
ENSCLAP00000022306	Met_10	PF02475.16	1.6e-06	1	1
ENSCLAP00000022304	Met_10	PF02475.16	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000022509	TRMT1-201	2239	XM_013512177	ENSCLAP00000022304	675 (aa)	XP_013367631	-
ENSCLAT00000022512	TRMT1-204	1863	-	ENSCLAP00000022307	620 (aa)	-	-
ENSCLAT00000022510	TRMT1-202	1878	-	ENSCLAP00000022305	625 (aa)	-	-
ENSCLAT00000022511	TRMT1-203	1923	-	ENSCLAP00000022306	640 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000015295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000015295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000015295	TRMT1	95	87.051	ENSG00000104907	TRMT1	100	92.147	Homo_sapiens
ENSCLAG00000015295	TRMT1	97	84.802	ENSAMEG00000012598	TRMT1	98	84.802	Ailuropoda_melanoleuca
ENSCLAG00000015295	TRMT1	94	54.194	ENSACIG00000018680	trmt1	96	56.340	Amphilophus_citrinellus
ENSCLAG00000015295	TRMT1	93	61.937	ENSAOCG00000006781	trmt1	89	64.667	Amphiprion_ocellaris
ENSCLAG00000015295	TRMT1	93	62.000	ENSAPEG00000007712	trmt1	89	64.667	Amphiprion_percula
ENSCLAG00000015295	TRMT1	90	65.625	ENSATEG00000001872	trmt1	85	67.938	Anabas_testudineus
ENSCLAG00000015295	TRMT1	93	62.791	ENSACAG00000003825	TRMT1	97	65.506	Anolis_carolinensis
ENSCLAG00000015295	TRMT1	98	79.154	ENSANAG00000023016	TRMT1	98	84.013	Aotus_nancymaae
ENSCLAG00000015295	TRMT1	92	60.914	ENSACLG00000010073	trmt1	94	63.345	Astatotilapia_calliptera
ENSCLAG00000015295	TRMT1	89	65.157	ENSAMXG00000012026	trmt1	85	67.826	Astyanax_mexicanus
ENSCLAG00000015295	TRMT1	97	84.650	ENSBTAG00000019325	TRMT1	94	84.650	Bos_taurus
ENSCLAG00000015295	TRMT1	84	40.590	WBGene00006613	trm-1	97	41.133	Caenorhabditis_elegans
ENSCLAG00000015295	TRMT1	99	78.527	ENSCJAG00000004566	TRMT1	99	81.988	Callithrix_jacchus
ENSCLAG00000015295	TRMT1	96	86.371	ENSCAFG00000017070	TRMT1	98	87.660	Canis_familiaris
ENSCLAG00000015295	TRMT1	99	83.307	ENSCAFG00020005397	TRMT1	98	83.307	Canis_lupus_dingo
ENSCLAG00000015295	TRMT1	96	84.923	ENSCHIG00000013569	TRMT1	98	84.923	Capra_hircus
ENSCLAG00000015295	TRMT1	97	79.685	ENSTSYG00000003207	TRMT1	97	82.003	Carlito_syrichta
ENSCLAG00000015295	TRMT1	87	81.408	ENSCAPG00000003355	TRMT1	98	85.225	Cavia_aperea
ENSCLAG00000015295	TRMT1	96	88.426	ENSCPOG00000011754	TRMT1	98	88.426	Cavia_porcellus
ENSCLAG00000015295	TRMT1	97	78.467	ENSCCAG00000022263	TRMT1	98	83.607	Cebus_capucinus
ENSCLAG00000015295	TRMT1	96	86.420	ENSCATG00000039850	TRMT1	98	86.420	Cercocebus_atys
ENSCLAG00000015295	TRMT1	88	69.697	ENSCATG00000038220	-	98	69.697	Cercocebus_atys
ENSCLAG00000015295	TRMT1	79	87.736	ENSCSAG00000006500	TRMT1	100	87.736	Chlorocebus_sabaeus
ENSCLAG00000015295	TRMT1	92	67.119	ENSCPBG00000023866	TRMT1	94	66.195	Chrysemys_picta_bellii
ENSCLAG00000015295	TRMT1	86	45.310	ENSCING00000002884	-	99	46.127	Ciona_intestinalis
ENSCLAG00000015295	TRMT1	85	44.424	ENSCSAVG00000010927	-	100	46.568	Ciona_savignyi
ENSCLAG00000015295	TRMT1	97	66.721	ENSCANG00000031650	-	96	66.559	Colobus_angolensis_palliatus
ENSCLAG00000015295	TRMT1	98	67.296	ENSCANG00000040631	TRMT1	97	70.469	Colobus_angolensis_palliatus
ENSCLAG00000015295	TRMT1	95	82.582	ENSCGRG00001022594	Trmt1	97	82.582	Cricetulus_griseus_chok1gshd
ENSCLAG00000015295	TRMT1	95	82.582	ENSCGRG00000017732	Trmt1	97	82.582	Cricetulus_griseus_crigri
ENSCLAG00000015295	TRMT1	89	62.982	ENSCSEG00000001643	trmt1	84	67.315	Cynoglossus_semilaevis
ENSCLAG00000015295	TRMT1	89	64.799	ENSCVAG00000011886	trmt1	86	67.133	Cyprinodon_variegatus
ENSCLAG00000015295	TRMT1	89	63.621	ENSDARG00000010978	trmt1	85	65.976	Danio_rerio
ENSCLAG00000015295	TRMT1	83	57.169	ENSDNOG00000048240	-	92	60.958	Dasypus_novemcinctus
ENSCLAG00000015295	TRMT1	98	79.621	ENSDORG00000014298	Trmt1	98	82.353	Dipodomys_ordii
ENSCLAG00000015295	TRMT1	80	47.582	FBgn0032430	CG6388	87	49.035	Drosophila_melanogaster
ENSCLAG00000015295	TRMT1	55	80.623	ENSETEG00000015483	-	53	80.623	Echinops_telfairi
ENSCLAG00000015295	TRMT1	89	50.896	ENSEBUG00000003449	trmt1	76	52.863	Eptatretus_burgeri
ENSCLAG00000015295	TRMT1	97	82.080	ENSEASG00005004050	TRMT1	98	85.577	Equus_asinus_asinus
ENSCLAG00000015295	TRMT1	97	82.400	ENSECAG00000016149	TRMT1	98	85.897	Equus_caballus
ENSCLAG00000015295	TRMT1	59	71.970	ENSEEUG00000014102	-	100	71.970	Erinaceus_europaeus
ENSCLAG00000015295	TRMT1	89	62.435	ENSELUG00000021659	trmt1	85	65.104	Esox_lucius
ENSCLAG00000015295	TRMT1	99	81.591	ENSFCAG00000000483	TRMT1	98	85.426	Felis_catus
ENSCLAG00000015295	TRMT1	95	90.358	ENSFDAG00000007386	TRMT1	97	90.358	Fukomys_damarensis
ENSCLAG00000015295	TRMT1	93	61.695	ENSFHEG00000012865	trmt1	98	64.587	Fundulus_heteroclitus
ENSCLAG00000015295	TRMT1	89	60.281	ENSGMOG00000006564	trmt1	98	60.839	Gadus_morhua
ENSCLAG00000015295	TRMT1	92	62.689	ENSGAFG00000011862	trmt1	92	65.940	Gambusia_affinis
ENSCLAG00000015295	TRMT1	94	58.909	ENSGACG00000000227	trmt1	99	60.800	Gasterosteus_aculeatus
ENSCLAG00000015295	TRMT1	94	64.038	ENSGAGG00000016432	TRMT1	92	66.035	Gopherus_agassizii
ENSCLAG00000015295	TRMT1	95	87.363	ENSGGOG00000014007	TRMT1	97	87.363	Gorilla_gorilla
ENSCLAG00000015295	TRMT1	87	56.115	ENSHBUG00000008821	trmt1	92	59.066	Haplochromis_burtoni
ENSCLAG00000015295	TRMT1	96	92.415	ENSHGLG00000015972	TRMT1	98	92.415	Heterocephalus_glaber_female
ENSCLAG00000015295	TRMT1	99	83.955	ENSHGLG00100018112	TRMT1	98	85.781	Heterocephalus_glaber_male
ENSCLAG00000015295	TRMT1	89	61.296	ENSHCOG00000009447	trmt1	88	63.860	Hippocampus_comes
ENSCLAG00000015295	TRMT1	89	64.089	ENSIPUG00000002899	trmt1	85	66.038	Ictalurus_punctatus
ENSCLAG00000015295	TRMT1	95	85.537	ENSSTOG00000012531	TRMT1	97	85.537	Ictidomys_tridecemlineatus
ENSCLAG00000015295	TRMT1	93	83.121	ENSJJAG00000017154	Trmt1	98	81.664	Jaculus_jaculus
ENSCLAG00000015295	TRMT1	92	63.423	ENSKMAG00000011809	trmt1	97	65.523	Kryptolebias_marmoratus
ENSCLAG00000015295	TRMT1	89	63.986	ENSLBEG00000012703	trmt1	84	66.375	Labrus_bergylta
ENSCLAG00000015295	TRMT1	89	56.294	ENSLACG00000014585	TRMT1	99	54.620	Latimeria_chalumnae
ENSCLAG00000015295	TRMT1	89	62.587	ENSLOCG00000006479	trmt1	97	63.558	Lepisosteus_oculatus
ENSCLAG00000015295	TRMT1	95	85.426	ENSLAFG00000014072	TRMT1	99	85.426	Loxodonta_africana
ENSCLAG00000015295	TRMT1	96	86.420	ENSMFAG00000033143	TRMT1	98	86.420	Macaca_fascicularis
ENSCLAG00000015295	TRMT1	98	82.201	ENSMMUG00000001167	TRMT1	98	81.517	Macaca_mulatta
ENSCLAG00000015295	TRMT1	96	86.265	ENSMNEG00000037867	TRMT1	98	86.265	Macaca_nemestrina
ENSCLAG00000015295	TRMT1	98	83.810	ENSMLEG00000016142	TRMT1	97	86.427	Mandrillus_leucophaeus
ENSCLAG00000015295	TRMT1	90	63.636	ENSMAMG00000004357	trmt1	87	66.610	Mastacembelus_armatus
ENSCLAG00000015295	TRMT1	92	61.421	ENSMZEG00005014510	trmt1	87	63.851	Maylandia_zebra
ENSCLAG00000015295	TRMT1	98	80.564	ENSMAUG00000011134	Trmt1	97	82.353	Mesocricetus_auratus
ENSCLAG00000015295	TRMT1	96	86.903	ENSMICG00000000793	TRMT1	98	86.903	Microcebus_murinus
ENSCLAG00000015295	TRMT1	97	80.284	ENSMOCG00000015895	Trmt1	95	83.281	Microtus_ochrogaster
ENSCLAG00000015295	TRMT1	89	63.972	ENSMMOG00000011097	trmt1	92	66.316	Mola_mola
ENSCLAG00000015295	TRMT1	95	71.452	ENSMODG00000011619	TRMT1	99	74.430	Monodelphis_domestica
ENSCLAG00000015295	TRMT1	99	79.874	MGP_CAROLIEiJ_G0031304	Trmt1	100	82.510	Mus_caroli
ENSCLAG00000015295	TRMT1	94	83.438	ENSMUSG00000001909	Trmt1	100	82.129	Mus_musculus
ENSCLAG00000015295	TRMT1	94	83.123	MGP_SPRETEiJ_G0032422	Trmt1	100	81.749	Mus_spretus
ENSCLAG00000015295	TRMT1	98	84.662	ENSMPUG00000004210	TRMT1	95	84.662	Mustela_putorius_furo
ENSCLAG00000015295	TRMT1	97	84.018	ENSMLUG00000012809	TRMT1	98	84.018	Myotis_lucifugus
ENSCLAG00000015295	TRMT1	100	77.987	ENSNGAG00000022486	Trmt1	96	82.942	Nannospalax_galili
ENSCLAG00000015295	TRMT1	76	66.011	ENSNBRG00000024376	trmt1	86	66.011	Neolamprologus_brichardi
ENSCLAG00000015295	TRMT1	86	81.421	ENSNLEG00000013019	-	97	86.527	Nomascus_leucogenys
ENSCLAG00000015295	TRMT1	93	71.405	ENSMEUG00000013756	TRMT1	100	74.124	Notamacropus_eugenii
ENSCLAG00000015295	TRMT1	76	88.152	ENSOPRG00000009471	-	79	88.152	Ochotona_princeps
ENSCLAG00000015295	TRMT1	96	91.654	ENSODEG00000010323	TRMT1	98	91.654	Octodon_degus
ENSCLAG00000015295	TRMT1	94	63.123	ENSONIG00000000400	trmt1	99	64.516	Oreochromis_niloticus
ENSCLAG00000015295	TRMT1	78	87.689	ENSOCUG00000021934	TRMT1	99	87.689	Oryctolagus_cuniculus
ENSCLAG00000015295	TRMT1	89	60.140	ENSORLG00000020074	trmt1	90	62.306	Oryzias_latipes
ENSCLAG00000015295	TRMT1	89	63.351	ENSORLG00020007561	trmt1	89	65.499	Oryzias_latipes_hni
ENSCLAG00000015295	TRMT1	89	63.684	ENSORLG00015006547	trmt1	86	66.200	Oryzias_latipes_hsok
ENSCLAG00000015295	TRMT1	94	61.085	ENSOMEG00000019343	trmt1	98	61.085	Oryzias_melastigma
ENSCLAG00000015295	TRMT1	95	81.922	ENSOGAG00000025576	TRMT1	97	84.903	Otolemur_garnettii
ENSCLAG00000015295	TRMT1	98	71.840	ENSOARG00000009397	TRMT1	92	72.115	Ovis_aries
ENSCLAG00000015295	TRMT1	99	77.143	ENSPPRG00000012117	TRMT1	99	77.201	Panthera_pardus
ENSCLAG00000015295	TRMT1	80	87.273	ENSPTIG00000008833	TRMT1	96	87.273	Panthera_tigris_altaica
ENSCLAG00000015295	TRMT1	98	63.942	ENSPTRG00000050421	-	97	64.734	Pan_troglodytes
ENSCLAG00000015295	TRMT1	95	87.207	ENSPTRG00000010557	TRMT1	97	87.207	Pan_troglodytes
ENSCLAG00000015295	TRMT1	98	84.127	ENSPANG00000009247	TRMT1	97	86.760	Papio_anubis
ENSCLAG00000015295	TRMT1	86	70.539	ENSPANG00000034058	-	94	71.757	Papio_anubis
ENSCLAG00000015295	TRMT1	89	66.608	ENSPKIG00000005309	trmt1	84	68.651	Paramormyrops_kingsleyae
ENSCLAG00000015295	TRMT1	90	56.529	ENSPSIG00000008762	TRMT1	83	58.733	Pelodiscus_sinensis
ENSCLAG00000015295	TRMT1	93	61.770	ENSPMGG00000019764	trmt1	93	64.167	Periophthalmus_magnuspinnatus
ENSCLAG00000015295	TRMT1	94	84.882	ENSPEMG00000016247	Trmt1	95	84.882	Peromyscus_maniculatus_bairdii
ENSCLAG00000015295	TRMT1	92	57.903	ENSPMAG00000004329	trmt1	96	57.903	Petromyzon_marinus
ENSCLAG00000015295	TRMT1	94	72.741	ENSPCIG00000019273	TRMT1	99	72.741	Phascolarctos_cinereus
ENSCLAG00000015295	TRMT1	92	64.706	ENSPFOG00000008527	trmt1	92	67.114	Poecilia_formosa
ENSCLAG00000015295	TRMT1	92	65.195	ENSPLAG00000018788	trmt1	92	69.373	Poecilia_latipinna
ENSCLAG00000015295	TRMT1	92	64.538	ENSPMEG00000013120	trmt1	92	66.946	Poecilia_mexicana
ENSCLAG00000015295	TRMT1	92	63.062	ENSPREG00000000211	trmt1	89	65.947	Poecilia_reticulata
ENSCLAG00000015295	TRMT1	95	87.207	ENSPPYG00000009622	TRMT1	97	87.207	Pongo_abelii
ENSCLAG00000015295	TRMT1	95	78.019	ENSPCAG00000003698	TRMT1	99	78.019	Procavia_capensis
ENSCLAG00000015295	TRMT1	99	82.862	ENSPCOG00000008653	TRMT1	97	86.427	Propithecus_coquereli
ENSCLAG00000015295	TRMT1	95	86.293	ENSPVAG00000015076	TRMT1	98	86.293	Pteropus_vampyrus
ENSCLAG00000015295	TRMT1	92	59.560	ENSPNYG00000013960	trmt1	93	62.331	Pundamilia_nyererei
ENSCLAG00000015295	TRMT1	82	65.756	ENSPNAG00000024859	trmt1	88	68.619	Pygocentrus_nattereri
ENSCLAG00000015295	TRMT1	95	81.311	ENSRNOG00000002914	Trmt1	95	84.565	Rattus_norvegicus
ENSCLAG00000015295	TRMT1	97	64.826	ENSRBIG00000037505	-	97	66.877	Rhinopithecus_bieti
ENSCLAG00000015295	TRMT1	96	86.111	ENSRBIG00000038324	TRMT1	98	86.111	Rhinopithecus_bieti
ENSCLAG00000015295	TRMT1	96	86.265	ENSRROG00000028599	TRMT1	98	86.265	Rhinopithecus_roxellana
ENSCLAG00000015295	TRMT1	97	64.038	ENSRROG00000031847	-	96	66.088	Rhinopithecus_roxellana
ENSCLAG00000015295	TRMT1	80	36.397	YDR120C	-	92	37.037	Saccharomyces_cerevisiae
ENSCLAG00000015295	TRMT1	96	80.583	ENSSBOG00000028861	TRMT1	98	84.098	Saimiri_boliviensis_boliviensis
ENSCLAG00000015295	TRMT1	91	74.010	ENSSHAG00000014381	TRMT1	96	75.926	Sarcophilus_harrisii
ENSCLAG00000015295	TRMT1	92	64.068	ENSSFOG00015004139	trmt1	86	65.932	Scleropages_formosus
ENSCLAG00000015295	TRMT1	89	64.398	ENSSMAG00000021136	trmt1	85	67.247	Scophthalmus_maximus
ENSCLAG00000015295	TRMT1	89	64.336	ENSSDUG00000012740	trmt1	84	66.841	Seriola_dumerili
ENSCLAG00000015295	TRMT1	89	63.986	ENSSLDG00000005971	trmt1	84	66.492	Seriola_lalandi_dorsalis
ENSCLAG00000015295	TRMT1	86	82.478	ENSSARG00000005138	TRMT1	99	83.951	Sorex_araneus
ENSCLAG00000015295	TRMT1	93	51.591	ENSSPUG00000001084	TRMT1	94	53.821	Sphenodon_punctatus
ENSCLAG00000015295	TRMT1	93	60.862	ENSSPAG00000007153	trmt1	99	63.455	Stegastes_partitus
ENSCLAG00000015295	TRMT1	97	83.784	ENSSSCG00000013744	TRMT1	98	87.680	Sus_scrofa
ENSCLAG00000015295	TRMT1	93	61.120	ENSTRUG00000010700	trmt1	92	60.806	Takifugu_rubripes
ENSCLAG00000015295	TRMT1	89	64.211	ENSTNIG00000018808	trmt1	97	66.725	Tetraodon_nigroviridis
ENSCLAG00000015295	TRMT1	98	79.685	ENSTTRG00000006379	TRMT1	98	83.411	Tursiops_truncatus
ENSCLAG00000015295	TRMT1	98	82.120	ENSUAMG00000022911	TRMT1	98	85.893	Ursus_americanus
ENSCLAG00000015295	TRMT1	97	81.847	ENSUMAG00000006027	TRMT1	98	85.897	Ursus_maritimus
ENSCLAG00000015295	TRMT1	96	86.287	ENSVVUG00000024177	TRMT1	98	86.287	Vulpes_vulpes
ENSCLAG00000015295	TRMT1	73	68.683	ENSXETG00000033863	TRMT1	92	71.121	Xenopus_tropicalis
ENSCLAG00000015295	TRMT1	92	63.361	ENSXCOG00000015733	trmt1	92	66.275	Xiphophorus_couchianus
ENSCLAG00000015295	TRMT1	89	65.088	ENSXMAG00000013823	trmt1	97	68.126	Xiphophorus_maculatus