EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000015406 (Gene tree)
Gene ID: 102016640
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 163506 bases
Position: chrJH721902.1:4258692-4422197
Accession: 102016640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000022456	R3H	PF01424.22	1.9e-05	1	1
ENSCLAP00000022457	R3H	PF01424.22	2e-05	1	1
ENSCLAP00000022457	RNA_bind	PF08675.11	2.2e-32	1	1
ENSCLAP00000022456	RNA_bind	PF08675.11	2.4e-32	1	1
ENSCLAP00000022456	CAF1	PF04857.20	1.9e-89	1	1
ENSCLAP00000022457	CAF1	PF04857.20	1.7e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000022662	PARN-201	4129	XM_005391134	ENSCLAP00000022456	639 (aa)	XP_005391191	-
ENSCLAT00000022663	PARN-202	1815	-	ENSCLAP00000022457	604 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000015406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000015406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000015406	PARN	99	90.923	ENSG00000140694	PARN	100	96.610	Homo_sapiens
ENSCLAG00000015406	PARN	99	89.828	ENSAMEG00000011208	PARN	100	89.828	Ailuropoda_melanoleuca
ENSCLAG00000015406	PARN	83	75.933	ENSACIG00000000619	parn	83	75.933	Amphilophus_citrinellus
ENSCLAG00000015406	PARN	91	73.504	ENSAOCG00000003465	parn	83	73.504	Amphiprion_ocellaris
ENSCLAG00000015406	PARN	74	78.013	ENSAPEG00000010661	parn	91	78.013	Amphiprion_percula
ENSCLAG00000015406	PARN	99	68.971	ENSATEG00000004661	parn	88	71.082	Anabas_testudineus
ENSCLAG00000015406	PARN	99	82.911	ENSAPLG00000013914	PARN	99	82.911	Anas_platyrhynchos
ENSCLAG00000015406	PARN	99	76.615	ENSACAG00000004973	PARN	100	77.231	Anolis_carolinensis
ENSCLAG00000015406	PARN	99	89.984	ENSANAG00000031516	PARN	100	96.610	Aotus_nancymaae
ENSCLAG00000015406	PARN	92	73.096	ENSACLG00000004742	parn	85	73.064	Astatotilapia_calliptera
ENSCLAG00000015406	PARN	92	71.259	ENSAMXG00000012390	parn	94	71.259	Astyanax_mexicanus
ENSCLAG00000015406	PARN	99	87.618	ENSBTAG00000018097	PARN	100	90.121	Bos_taurus
ENSCLAG00000015406	PARN	99	90.454	ENSCJAG00000015866	PARN	100	96.610	Callithrix_jacchus
ENSCLAG00000015406	PARN	99	89.812	ENSCAFG00000018795	PARN	100	89.812	Canis_familiaris
ENSCLAG00000015406	PARN	99	89.812	ENSCAFG00020024126	PARN	100	89.812	Canis_lupus_dingo
ENSCLAG00000015406	PARN	99	90.439	ENSCHIG00000018143	PARN	100	90.439	Capra_hircus
ENSCLAG00000015406	PARN	73	63.617	ENSCAPG00000007984	PARN	78	63.617	Cavia_aperea
ENSCLAG00000015406	PARN	99	94.349	ENSCPOG00000002263	PARN	100	94.349	Cavia_porcellus
ENSCLAG00000015406	PARN	99	90.454	ENSCCAG00000030367	PARN	100	96.610	Cebus_capucinus
ENSCLAG00000015406	PARN	99	80.908	ENSCATG00000041368	PARN	100	96.610	Cercocebus_atys
ENSCLAG00000015406	PARN	52	36.552	ENSCATG00000033196	PNLDC1	70	36.552	Cercocebus_atys
ENSCLAG00000015406	PARN	99	90.767	ENSCSAG00000008142	PARN	100	90.767	Chlorocebus_sabaeus
ENSCLAG00000015406	PARN	99	73.376	ENSCHOG00000007014	PARN	100	73.376	Choloepus_hoffmanni
ENSCLAG00000015406	PARN	85	85.662	ENSCPBG00000006609	PARN	94	85.797	Chrysemys_picta_bellii
ENSCLAG00000015406	PARN	80	44.465	ENSCING00000010142	-	99	44.173	Ciona_intestinalis
ENSCLAG00000015406	PARN	99	78.571	ENSCANG00000028849	-	100	96.610	Colobus_angolensis_palliatus
ENSCLAG00000015406	PARN	99	85.156	ENSCGRG00001012096	Parn	100	85.156	Cricetulus_griseus_chok1gshd
ENSCLAG00000015406	PARN	99	85.156	ENSCGRG00000004939	Parn	100	85.156	Cricetulus_griseus_crigri
ENSCLAG00000015406	PARN	91	71.404	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSCLAG00000015406	PARN	83	77.985	ENSCVAG00000014848	parn	79	77.985	Cyprinodon_variegatus
ENSCLAG00000015406	PARN	98	66.088	ENSDARG00000102634	parn	98	71.910	Danio_rerio
ENSCLAG00000015406	PARN	99	89.812	ENSDNOG00000000833	PARN	98	92.586	Dasypus_novemcinctus
ENSCLAG00000015406	PARN	88	91.255	ENSETEG00000014828	-	88	91.255	Echinops_telfairi
ENSCLAG00000015406	PARN	55	49.854	ENSEBUG00000007052	PARN	70	69.778	Eptatretus_burgeri
ENSCLAG00000015406	PARN	99	89.655	ENSEASG00005011400	PARN	100	89.655	Equus_asinus_asinus
ENSCLAG00000015406	PARN	99	89.342	ENSECAG00000017792	PARN	100	89.342	Equus_caballus
ENSCLAG00000015406	PARN	88	81.900	ENSEEUG00000010370	PARN	86	81.900	Erinaceus_europaeus
ENSCLAG00000015406	PARN	90	72.384	ENSELUG00000013139	parn	75	72.384	Esox_lucius
ENSCLAG00000015406	PARN	99	90.596	ENSFCAG00000044961	PARN	100	93.220	Felis_catus
ENSCLAG00000015406	PARN	99	82.409	ENSFALG00000003911	PARN	98	82.409	Ficedula_albicollis
ENSCLAG00000015406	PARN	99	94.192	ENSFDAG00000009234	PARN	100	94.192	Fukomys_damarensis
ENSCLAG00000015406	PARN	91	67.388	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSCLAG00000015406	PARN	83	76.306	ENSGMOG00000003231	parn	97	76.306	Gadus_morhua
ENSCLAG00000015406	PARN	99	81.377	ENSGALG00000003091	PARN	100	81.377	Gallus_gallus
ENSCLAG00000015406	PARN	90	73.883	ENSGAFG00000011061	parn	84	73.232	Gambusia_affinis
ENSCLAG00000015406	PARN	100	64.818	ENSGACG00000019501	parn	100	68.992	Gasterosteus_aculeatus
ENSCLAG00000015406	PARN	51	78.834	ENSGAGG00000023281	PARN	83	78.834	Gopherus_agassizii
ENSCLAG00000015406	PARN	97	91.143	ENSGGOG00000025224	PARN	100	96.610	Gorilla_gorilla
ENSCLAG00000015406	PARN	99	67.030	ENSHBUG00000017906	parn	90	76.723	Haplochromis_burtoni
ENSCLAG00000015406	PARN	99	93.721	ENSHGLG00000010886	PARN	100	93.721	Heterocephalus_glaber_female
ENSCLAG00000015406	PARN	99	93.721	ENSHGLG00100014659	PARN	100	93.721	Heterocephalus_glaber_male
ENSCLAG00000015406	PARN	87	70.035	ENSHCOG00000008683	parn	93	70.536	Hippocampus_comes
ENSCLAG00000015406	PARN	100	53.418	ENSIPUG00000012401	parn	79	65.291	Ictalurus_punctatus
ENSCLAG00000015406	PARN	99	91.052	ENSSTOG00000007519	PARN	100	91.052	Ictidomys_tridecemlineatus
ENSCLAG00000015406	PARN	99	86.991	ENSJJAG00000023049	Parn	100	86.991	Jaculus_jaculus
ENSCLAG00000015406	PARN	91	73.549	ENSKMAG00000009462	parn	84	73.549	Kryptolebias_marmoratus
ENSCLAG00000015406	PARN	92	72.437	ENSLBEG00000009167	parn	90	72.437	Labrus_bergylta
ENSCLAG00000015406	PARN	79	78.571	ENSLACG00000004207	PARN	100	77.594	Latimeria_chalumnae
ENSCLAG00000015406	PARN	92	75.680	ENSLOCG00000000715	parn	85	75.510	Lepisosteus_oculatus
ENSCLAG00000015406	PARN	99	89.812	ENSLAFG00000015036	PARN	100	89.812	Loxodonta_africana
ENSCLAG00000015406	PARN	99	85.625	ENSMFAG00000044852	PARN	100	96.610	Macaca_fascicularis
ENSCLAG00000015406	PARN	99	90.610	ENSMMUG00000018849	PARN	100	96.610	Macaca_mulatta
ENSCLAG00000015406	PARN	99	90.767	ENSMNEG00000045108	PARN	100	96.610	Macaca_nemestrina
ENSCLAG00000015406	PARN	99	90.610	ENSMLEG00000031743	PARN	100	96.610	Mandrillus_leucophaeus
ENSCLAG00000015406	PARN	99	67.945	ENSMAMG00000006939	parn	82	74.306	Mastacembelus_armatus
ENSCLAG00000015406	PARN	91	73.810	ENSMZEG00005013590	parn	90	76.306	Maylandia_zebra
ENSCLAG00000015406	PARN	97	80.000	ENSMGAG00000001004	PARN	98	80.000	Meleagris_gallopavo
ENSCLAG00000015406	PARN	99	79.321	ENSMAUG00000008025	Parn	100	79.321	Mesocricetus_auratus
ENSCLAG00000015406	PARN	52	34.932	ENSMAUG00000012298	Pnldc1	68	34.932	Mesocricetus_auratus
ENSCLAG00000015406	PARN	99	91.379	ENSMICG00000016053	PARN	100	94.915	Microcebus_murinus
ENSCLAG00000015406	PARN	77	90.688	ENSMOCG00000022211	Parn	100	90.688	Microtus_ochrogaster
ENSCLAG00000015406	PARN	100	62.480	ENSMMOG00000011333	parn	87	75.701	Mola_mola
ENSCLAG00000015406	PARN	77	92.540	ENSMODG00000004915	PARN	99	92.540	Monodelphis_domestica
ENSCLAG00000015406	PARN	83	78.585	ENSMALG00000019426	parn	91	78.585	Monopterus_albus
ENSCLAG00000015406	PARN	99	84.483	MGP_CAROLIEiJ_G0020466	Parn	100	84.483	Mus_caroli
ENSCLAG00000015406	PARN	99	84.013	ENSMUSG00000022685	Parn	100	90.244	Mus_musculus
ENSCLAG00000015406	PARN	99	84.326	MGP_PahariEiJ_G0016172	Parn	100	84.326	Mus_pahari
ENSCLAG00000015406	PARN	99	84.169	MGP_SPRETEiJ_G0021361	Parn	100	84.169	Mus_spretus
ENSCLAG00000015406	PARN	99	90.439	ENSMPUG00000014464	PARN	100	90.439	Mustela_putorius_furo
ENSCLAG00000015406	PARN	77	92.713	ENSMLUG00000005414	PARN	100	92.713	Myotis_lucifugus
ENSCLAG00000015406	PARN	83	76.030	ENSNBRG00000006805	parn	90	76.030	Neolamprologus_brichardi
ENSCLAG00000015406	PARN	99	90.610	ENSNLEG00000010241	PARN	100	96.610	Nomascus_leucogenys
ENSCLAG00000015406	PARN	99	60.380	ENSMEUG00000008178	-	100	60.380	Notamacropus_eugenii
ENSCLAG00000015406	PARN	99	84.786	ENSOPRG00000012187	PARN	100	84.786	Ochotona_princeps
ENSCLAG00000015406	PARN	99	86.094	ENSODEG00000001617	PARN	100	86.094	Octodon_degus
ENSCLAG00000015406	PARN	99	68.654	ENSONIG00000000151	parn	100	68.654	Oreochromis_niloticus
ENSCLAG00000015406	PARN	59	81.217	ENSOANG00000020155	-	97	81.053	Ornithorhynchus_anatinus
ENSCLAG00000015406	PARN	99	90.032	ENSOCUG00000000322	PARN	99	90.032	Oryctolagus_cuniculus
ENSCLAG00000015406	PARN	91	72.696	ENSORLG00020010313	parn	85	72.696	Oryzias_latipes_hni
ENSCLAG00000015406	PARN	91	72.696	ENSORLG00015000300	parn	85	72.696	Oryzias_latipes_hsok
ENSCLAG00000015406	PARN	91	72.666	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSCLAG00000015406	PARN	77	92.525	ENSOGAG00000014626	PARN	100	92.525	Otolemur_garnettii
ENSCLAG00000015406	PARN	77	95.547	ENSOARG00000007574	PARN	100	95.547	Ovis_aries
ENSCLAG00000015406	PARN	99	90.923	ENSPPAG00000031438	PARN	100	96.610	Pan_paniscus
ENSCLAG00000015406	PARN	99	90.439	ENSPPRG00000018583	PARN	100	93.220	Panthera_pardus
ENSCLAG00000015406	PARN	99	90.596	ENSPTIG00000012135	PARN	100	93.220	Panthera_tigris_altaica
ENSCLAG00000015406	PARN	99	90.610	ENSPTRG00000007792	PARN	100	96.610	Pan_troglodytes
ENSCLAG00000015406	PARN	99	87.637	ENSPANG00000020099	PARN	100	96.610	Papio_anubis
ENSCLAG00000015406	PARN	91	73.838	ENSPKIG00000022807	parn	95	66.829	Paramormyrops_kingsleyae
ENSCLAG00000015406	PARN	95	84.628	ENSPSIG00000014804	PARN	100	82.322	Pelodiscus_sinensis
ENSCLAG00000015406	PARN	80	76.848	ENSPMGG00000014431	parn	77	73.285	Periophthalmus_magnuspinnatus
ENSCLAG00000015406	PARN	100	81.877	ENSPEMG00000018439	Parn	100	82.316	Peromyscus_maniculatus_bairdii
ENSCLAG00000015406	PARN	81	67.308	ENSPMAG00000003956	parn	99	67.308	Petromyzon_marinus
ENSCLAG00000015406	PARN	66	84.870	ENSPCIG00000001259	PARN	91	88.136	Phascolarctos_cinereus
ENSCLAG00000015406	PARN	90	73.966	ENSPFOG00000012823	parn	84	73.142	Poecilia_formosa
ENSCLAG00000015406	PARN	90	74.138	ENSPLAG00000006395	parn	84	73.311	Poecilia_latipinna
ENSCLAG00000015406	PARN	90	74.138	ENSPMEG00000007711	parn	84	73.311	Poecilia_mexicana
ENSCLAG00000015406	PARN	90	73.793	ENSPREG00000000147	parn	84	72.973	Poecilia_reticulata
ENSCLAG00000015406	PARN	99	90.016	ENSPPYG00000007123	PARN	100	90.016	Pongo_abelii
ENSCLAG00000015406	PARN	95	79.835	ENSPCAG00000001741	PARN	100	79.835	Procavia_capensis
ENSCLAG00000015406	PARN	99	88.558	ENSPCOG00000019292	PARN	100	94.915	Propithecus_coquereli
ENSCLAG00000015406	PARN	99	85.895	ENSPVAG00000002547	PARN	100	85.895	Pteropus_vampyrus
ENSCLAG00000015406	PARN	91	73.810	ENSPNYG00000006835	parn	90	73.743	Pundamilia_nyererei
ENSCLAG00000015406	PARN	78	76.353	ENSPNAG00000018905	parn	83	76.353	Pygocentrus_nattereri
ENSCLAG00000015406	PARN	99	81.583	ENSRNOG00000002912	Parn	97	87.755	Rattus_norvegicus
ENSCLAG00000015406	PARN	52	86.486	ENSRBIG00000018726	PARN	100	86.486	Rhinopithecus_bieti
ENSCLAG00000015406	PARN	52	86.486	ENSRROG00000011162	-	100	86.486	Rhinopithecus_roxellana
ENSCLAG00000015406	PARN	99	88.889	ENSSBOG00000034726	PARN	100	96.610	Saimiri_boliviensis_boliviensis
ENSCLAG00000015406	PARN	65	92.326	ENSSHAG00000008493	PARN	93	92.326	Sarcophilus_harrisii
ENSCLAG00000015406	PARN	99	69.861	ENSSFOG00015014165	parn	96	71.812	Scleropages_formosus
ENSCLAG00000015406	PARN	98	68.297	ENSSMAG00000000685	parn	100	62.809	Scophthalmus_maximus
ENSCLAG00000015406	PARN	91	72.727	ENSSDUG00000014555	parn	84	72.727	Seriola_dumerili
ENSCLAG00000015406	PARN	82	85.977	ENSSARG00000014339	PARN	100	77.163	Sorex_araneus
ENSCLAG00000015406	PARN	99	83.699	ENSSPUG00000007719	PARN	100	83.699	Sphenodon_punctatus
ENSCLAG00000015406	PARN	91	74.533	ENSSPAG00000007095	parn	86	74.157	Stegastes_partitus
ENSCLAG00000015406	PARN	99	89.185	ENSSSCG00000007878	PARN	89	89.185	Sus_scrofa
ENSCLAG00000015406	PARN	55	31.389	ENSTGUG00000011418	PNLDC1	68	31.389	Taeniopygia_guttata
ENSCLAG00000015406	PARN	99	82.595	ENSTGUG00000004971	PARN	99	82.595	Taeniopygia_guttata
ENSCLAG00000015406	PARN	99	68.576	ENSTNIG00000008252	parn	100	69.040	Tetraodon_nigroviridis
ENSCLAG00000015406	PARN	90	76.511	ENSTBEG00000010407	PARN	100	76.511	Tupaia_belangeri
ENSCLAG00000015406	PARN	99	85.261	ENSTTRG00000002843	PARN	100	85.261	Tursiops_truncatus
ENSCLAG00000015406	PARN	68	82.339	ENSUAMG00000008283	PARN	90	82.339	Ursus_americanus
ENSCLAG00000015406	PARN	99	89.969	ENSUMAG00000004527	PARN	100	89.969	Ursus_maritimus
ENSCLAG00000015406	PARN	96	88.072	ENSVPAG00000008968	PARN	99	88.072	Vicugna_pacos
ENSCLAG00000015406	PARN	99	90.282	ENSVVUG00000019509	PARN	100	90.282	Vulpes_vulpes
ENSCLAG00000015406	PARN	99	73.396	ENSXETG00000010994	parn	100	82.319	Xenopus_tropicalis
ENSCLAG00000015406	PARN	90	69.948	ENSXCOG00000015990	parn	96	69.374	Xiphophorus_couchianus
ENSCLAG00000015406	PARN	91	73.142	ENSXMAG00000014783	parn	84	73.142	Xiphophorus_maculatus