EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000015546 (Gene tree)
Gene ID: 102024287
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 13955 bases
Position: chrJH721902.1:14995404-15009358
Accession: 102024287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000022675	RRM_1	PF00076.22	5.2e-18	1	1
ENSCLAP00000022676	RRM_1	PF00076.22	5.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000022884	RNPS1-202	2118	XM_005391430	ENSCLAP00000022676	305 (aa)	XP_005391487	UPI00038F0072
ENSCLAT00000022883	RNPS1-201	1719	XM_005391433	ENSCLAP00000022675	282 (aa)	XP_005391490	UPI00038EBC8E

Gene Model

Click here to download ENSCLAG00000015546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000015546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000015546	RNPS1	100	99.672	ENSG00000205937	RNPS1	100	100.000	Homo_sapiens
ENSCLAG00000015546	RNPS1	78	69.038	ENSAPOG00000014649	-	85	70.124	Acanthochromis_polyacanthus
ENSCLAG00000015546	RNPS1	100	99.672	ENSAMEG00000017861	RNPS1	100	99.672	Ailuropoda_melanoleuca
ENSCLAG00000015546	RNPS1	76	67.907	ENSACIG00000014367	-	76	66.512	Amphilophus_citrinellus
ENSCLAG00000015546	RNPS1	85	70.417	ENSAOCG00000002404	RNPS1	84	70.417	Amphiprion_ocellaris
ENSCLAG00000015546	RNPS1	85	70.293	ENSAPEG00000006497	RNPS1	81	70.293	Amphiprion_percula
ENSCLAG00000015546	RNPS1	85	72.083	ENSATEG00000024267	RNPS1	84	72.614	Anabas_testudineus
ENSCLAG00000015546	RNPS1	86	65.779	ENSAPLG00000006231	RNPS1	65	93.548	Anas_platyrhynchos
ENSCLAG00000015546	RNPS1	76	90.987	ENSACAG00000004088	RNPS1	94	90.987	Anolis_carolinensis
ENSCLAG00000015546	RNPS1	77	96.789	ENSANAG00000029802	-	90	92.887	Aotus_nancymaae
ENSCLAG00000015546	RNPS1	100	99.344	ENSANAG00000028802	RNPS1	100	99.344	Aotus_nancymaae
ENSCLAG00000015546	RNPS1	85	64.583	ENSACLG00000021537	-	96	68.302	Astatotilapia_calliptera
ENSCLAG00000015546	RNPS1	85	75.417	ENSAMXG00000006330	-	84	68.750	Astyanax_mexicanus
ENSCLAG00000015546	RNPS1	100	99.016	ENSBTAG00000009969	RNPS1	100	99.016	Bos_taurus
ENSCLAG00000015546	RNPS1	100	99.672	ENSCJAG00000014969	RNPS1	100	99.672	Callithrix_jacchus
ENSCLAG00000015546	RNPS1	100	99.672	ENSCAFG00000019397	RNPS1	100	99.672	Canis_familiaris
ENSCLAG00000015546	RNPS1	100	99.672	ENSCAFG00020026159	RNPS1	100	99.672	Canis_lupus_dingo
ENSCLAG00000015546	RNPS1	72	99.510	ENSCHIG00000014621	-	69	99.024	Capra_hircus
ENSCLAG00000015546	RNPS1	79	95.455	ENSTSYG00000031848	-	98	95.417	Carlito_syrichta
ENSCLAG00000015546	RNPS1	100	99.672	ENSTSYG00000001629	RNPS1	100	99.672	Carlito_syrichta
ENSCLAG00000015546	RNPS1	100	99.344	ENSCAPG00000007731	RNPS1	100	99.344	Cavia_aperea
ENSCLAG00000015546	RNPS1	100	99.344	ENSCPOG00000002066	RNPS1	100	99.344	Cavia_porcellus
ENSCLAG00000015546	RNPS1	100	99.344	ENSCCAG00000034480	RNPS1	100	99.344	Cebus_capucinus
ENSCLAG00000015546	RNPS1	95	90.034	ENSCATG00000042361	-	87	93.893	Cercocebus_atys
ENSCLAG00000015546	RNPS1	100	99.672	ENSCATG00000013756	RNPS1	100	99.672	Cercocebus_atys
ENSCLAG00000015546	RNPS1	100	96.809	ENSCSAG00000005219	-	95	96.809	Chlorocebus_sabaeus
ENSCLAG00000015546	RNPS1	100	98.033	ENSCHOG00000004866	RNPS1	100	98.033	Choloepus_hoffmanni
ENSCLAG00000015546	RNPS1	79	63.750	ENSCPBG00000000214	RNPS1	73	63.889	Chrysemys_picta_bellii
ENSCLAG00000015546	RNPS1	100	99.672	ENSCANG00000041307	RNPS1	100	99.672	Colobus_angolensis_palliatus
ENSCLAG00000015546	RNPS1	72	85.577	ENSCANG00000030189	-	79	70.192	Colobus_angolensis_palliatus
ENSCLAG00000015546	RNPS1	100	99.672	ENSCGRG00001020431	Rnps1	100	99.672	Cricetulus_griseus_chok1gshd
ENSCLAG00000015546	RNPS1	100	99.016	ENSCGRG00000014021	Rnps1	80	100.000	Cricetulus_griseus_crigri
ENSCLAG00000015546	RNPS1	85	71.250	ENSCSEG00000000402	RNPS1	85	68.702	Cynoglossus_semilaevis
ENSCLAG00000015546	RNPS1	85	69.874	ENSCSEG00000015997	RNPS1	82	69.874	Cynoglossus_semilaevis
ENSCLAG00000015546	RNPS1	76	70.833	ENSCVAG00000010868	RNPS1	75	64.815	Cyprinodon_variegatus
ENSCLAG00000015546	RNPS1	85	63.750	ENSDARG00000116743	rnps1	84	69.710	Danio_rerio
ENSCLAG00000015546	RNPS1	85	63.750	ENSDARG00000100188	RNPS1	84	69.710	Danio_rerio
ENSCLAG00000015546	RNPS1	70	73.469	ENSDNOG00000038751	-	99	72.727	Dasypus_novemcinctus
ENSCLAG00000015546	RNPS1	100	99.672	ENSDNOG00000016081	RNPS1	100	99.672	Dasypus_novemcinctus
ENSCLAG00000015546	RNPS1	100	99.016	ENSDORG00000001755	Rnps1	100	99.016	Dipodomys_ordii
ENSCLAG00000015546	RNPS1	100	99.672	ENSEASG00005004862	RNPS1	100	99.672	Equus_asinus_asinus
ENSCLAG00000015546	RNPS1	81	93.548	ENSECAG00000023288	RNPS1	83	98.268	Equus_caballus
ENSCLAG00000015546	RNPS1	100	80.656	ENSEEUG00000005933	RNPS1	100	80.656	Erinaceus_europaeus
ENSCLAG00000015546	RNPS1	100	99.344	ENSFCAG00000007690	RNPS1	100	99.344	Felis_catus
ENSCLAG00000015546	RNPS1	85	95.397	ENSFALG00000004868	RNPS1	85	95.417	Ficedula_albicollis
ENSCLAG00000015546	RNPS1	100	99.016	ENSFDAG00000003386	RNPS1	100	99.016	Fukomys_damarensis
ENSCLAG00000015546	RNPS1	77	70.833	ENSFHEG00000011705	RNPS1	75	71.429	Fundulus_heteroclitus
ENSCLAG00000015546	RNPS1	85	95.417	ENSGALG00000009288	RNPS1	85	95.417	Gallus_gallus
ENSCLAG00000015546	RNPS1	85	68.465	ENSGACG00000005641	-	84	68.465	Gasterosteus_aculeatus
ENSCLAG00000015546	RNPS1	86	93.156	ENSGAGG00000010452	RNPS1	86	93.156	Gopherus_agassizii
ENSCLAG00000015546	RNPS1	100	99.672	ENSGGOG00000014275	RNPS1	100	99.672	Gorilla_gorilla
ENSCLAG00000015546	RNPS1	73	98.068	ENSGGOG00000026421	-	79	98.068	Gorilla_gorilla
ENSCLAG00000015546	RNPS1	85	64.583	ENSHBUG00000017337	-	84	72.199	Haplochromis_burtoni
ENSCLAG00000015546	RNPS1	100	99.672	ENSHGLG00000013957	RNPS1	100	99.672	Heterocephalus_glaber_female
ENSCLAG00000015546	RNPS1	79	95.982	ENSHGLG00000006292	-	97	95.142	Heterocephalus_glaber_female
ENSCLAG00000015546	RNPS1	80	83.265	ENSHGLG00100017879	-	80	70.248	Heterocephalus_glaber_male
ENSCLAG00000015546	RNPS1	100	99.672	ENSHGLG00100003539	RNPS1	100	99.672	Heterocephalus_glaber_male
ENSCLAG00000015546	RNPS1	73	92.683	ENSHGLG00100011610	-	84	92.683	Heterocephalus_glaber_male
ENSCLAG00000015546	RNPS1	92	94.231	ENSHGLG00100015267	-	80	95.495	Heterocephalus_glaber_male
ENSCLAG00000015546	RNPS1	86	77.186	ENSSTOG00000013200	RNPS1	100	87.869	Ictidomys_tridecemlineatus
ENSCLAG00000015546	RNPS1	100	99.344	ENSJJAG00000015576	-	100	99.344	Jaculus_jaculus
ENSCLAG00000015546	RNPS1	86	82.129	ENSJJAG00000019234	-	68	79.498	Jaculus_jaculus
ENSCLAG00000015546	RNPS1	85	71.784	ENSKMAG00000009135	RNPS1	84	67.220	Kryptolebias_marmoratus
ENSCLAG00000015546	RNPS1	85	87.917	ENSLACG00000007112	RNPS1	85	87.917	Latimeria_chalumnae
ENSCLAG00000015546	RNPS1	85	67.500	ENSLOCG00000001758	RNPS1	84	83.333	Lepisosteus_oculatus
ENSCLAG00000015546	RNPS1	100	99.672	ENSMFAG00000042142	RNPS1	100	99.672	Macaca_fascicularis
ENSCLAG00000015546	RNPS1	86	89.734	ENSMFAG00000044121	-	83	83.265	Macaca_fascicularis
ENSCLAG00000015546	RNPS1	72	100.000	ENSMMUG00000019238	-	80	100.000	Macaca_mulatta
ENSCLAG00000015546	RNPS1	88	94.776	ENSMMUG00000041726	-	92	94.677	Macaca_mulatta
ENSCLAG00000015546	RNPS1	88	95.149	ENSMNEG00000024827	-	92	95.057	Macaca_nemestrina
ENSCLAG00000015546	RNPS1	73	93.237	ENSMLEG00000040232	-	81	93.237	Mandrillus_leucophaeus
ENSCLAG00000015546	RNPS1	100	99.672	ENSMLEG00000036928	RNPS1	100	99.672	Mandrillus_leucophaeus
ENSCLAG00000015546	RNPS1	85	70.000	ENSMAMG00000021609	-	84	70.539	Mastacembelus_armatus
ENSCLAG00000015546	RNPS1	85	74.583	ENSMAMG00000021148	-	88	68.199	Mastacembelus_armatus
ENSCLAG00000015546	RNPS1	85	64.730	ENSMZEG00005006256	-	85	72.199	Maylandia_zebra
ENSCLAG00000015546	RNPS1	78	94.977	ENSMGAG00000010042	RNPS1	98	94.492	Meleagris_gallopavo
ENSCLAG00000015546	RNPS1	100	99.016	ENSMICG00000031543	RNPS1	100	99.016	Microcebus_murinus
ENSCLAG00000015546	RNPS1	100	99.672	ENSMOCG00000003429	Rnps1	100	99.672	Microtus_ochrogaster
ENSCLAG00000015546	RNPS1	76	66.512	ENSMMOG00000010863	RNPS1	75	65.116	Mola_mola
ENSCLAG00000015546	RNPS1	100	97.386	ENSMODG00000015891	RNPS1	100	97.386	Monodelphis_domestica
ENSCLAG00000015546	RNPS1	100	99.672	ENSMUSG00000034681	Rnps1	100	99.672	Mus_musculus
ENSCLAG00000015546	RNPS1	100	99.645	MGP_PahariEiJ_G0023498	Rnps1	100	99.645	Mus_pahari
ENSCLAG00000015546	RNPS1	100	99.672	MGP_SPRETEiJ_G0022092	Rnps1	100	99.672	Mus_spretus
ENSCLAG00000015546	RNPS1	100	99.672	ENSMLUG00000016808	RNPS1	100	99.672	Myotis_lucifugus
ENSCLAG00000015546	RNPS1	100	99.645	ENSNGAG00000023702	Rnps1	100	99.645	Nannospalax_galili
ENSCLAG00000015546	RNPS1	85	64.730	ENSNBRG00000014540	-	92	68.750	Neolamprologus_brichardi
ENSCLAG00000015546	RNPS1	76	67.907	ENSNBRG00000023437	RNPS1	75	66.512	Neolamprologus_brichardi
ENSCLAG00000015546	RNPS1	89	98.162	ENSNLEG00000009243	RNPS1	100	98.162	Nomascus_leucogenys
ENSCLAG00000015546	RNPS1	100	96.393	ENSMEUG00000008882	RNPS1	100	96.393	Notamacropus_eugenii
ENSCLAG00000015546	RNPS1	100	96.393	ENSOPRG00000016422	RNPS1	100	96.393	Ochotona_princeps
ENSCLAG00000015546	RNPS1	58	64.634	ENSODEG00000002513	-	79	64.516	Octodon_degus
ENSCLAG00000015546	RNPS1	57	66.250	ENSODEG00000017258	-	77	64.516	Octodon_degus
ENSCLAG00000015546	RNPS1	78	63.750	ENSONIG00000019627	-	85	71.784	Oreochromis_niloticus
ENSCLAG00000015546	RNPS1	85	70.000	ENSORLG00015011183	RNPS1	74	71.369	Oryzias_latipes_hsok
ENSCLAG00000015546	RNPS1	96	98.973	ENSOARG00000018056	-	81	98.973	Ovis_aries
ENSCLAG00000015546	RNPS1	79	94.215	ENSPPAG00000037836	-	99	94.215	Pan_paniscus
ENSCLAG00000015546	RNPS1	89	94.815	ENSPPAG00000011845	RNPS1	91	93.416	Pan_paniscus
ENSCLAG00000015546	RNPS1	100	99.344	ENSPPRG00000011255	RNPS1	100	99.344	Panthera_pardus
ENSCLAG00000015546	RNPS1	63	100.000	ENSPTIG00000015643	RNPS1	85	100.000	Panthera_tigris_altaica
ENSCLAG00000015546	RNPS1	100	99.344	ENSPTRG00000031310	RNPS1	100	99.344	Pan_troglodytes
ENSCLAG00000015546	RNPS1	78	93.724	ENSPTRG00000046326	-	91	93.724	Pan_troglodytes
ENSCLAG00000015546	RNPS1	100	99.672	ENSPANG00000015748	RNPS1	100	99.672	Papio_anubis
ENSCLAG00000015546	RNPS1	73	72.947	ENSPANG00000033576	-	75	74.129	Papio_anubis
ENSCLAG00000015546	RNPS1	85	80.083	ENSPKIG00000023465	RNPS1	85	80.083	Paramormyrops_kingsleyae
ENSCLAG00000015546	RNPS1	85	94.142	ENSPSIG00000006048	RNPS1	86	92.776	Pelodiscus_sinensis
ENSCLAG00000015546	RNPS1	100	99.672	ENSPEMG00000012797	Rnps1	100	99.672	Peromyscus_maniculatus_bairdii
ENSCLAG00000015546	RNPS1	100	97.872	ENSPCIG00000025012	RNPS1	100	97.872	Phascolarctos_cinereus
ENSCLAG00000015546	RNPS1	61	88.742	ENSPCIG00000016114	-	80	98.387	Phascolarctos_cinereus
ENSCLAG00000015546	RNPS1	77	67.742	ENSPFOG00000009978	RNPS1	75	63.889	Poecilia_formosa
ENSCLAG00000015546	RNPS1	77	67.742	ENSPLAG00000009343	RNPS1	75	63.889	Poecilia_latipinna
ENSCLAG00000015546	RNPS1	77	67.742	ENSPMEG00000008552	RNPS1	75	63.889	Poecilia_mexicana
ENSCLAG00000015546	RNPS1	77	67.742	ENSPREG00000001843	RNPS1	75	63.889	Poecilia_reticulata
ENSCLAG00000015546	RNPS1	100	97.377	ENSPCAG00000004514	RNPS1	100	97.377	Procavia_capensis
ENSCLAG00000015546	RNPS1	100	99.344	ENSPCOG00000005478	RNPS1	100	99.344	Propithecus_coquereli
ENSCLAG00000015546	RNPS1	100	99.344	ENSPVAG00000005105	RNPS1	100	99.344	Pteropus_vampyrus
ENSCLAG00000015546	RNPS1	85	76.250	ENSPNAG00000025479	RNPS1	84	69.583	Pygocentrus_nattereri
ENSCLAG00000015546	RNPS1	100	99.344	ENSRNOG00000008703	Rnps1	100	99.344	Rattus_norvegicus
ENSCLAG00000015546	RNPS1	99	98.932	ENSRBIG00000038965	-	99	98.932	Rhinopithecus_bieti
ENSCLAG00000015546	RNPS1	89	100.000	ENSRROG00000041252	RNPS1	97	96.639	Rhinopithecus_roxellana
ENSCLAG00000015546	RNPS1	100	99.672	ENSSBOG00000027927	RNPS1	100	99.672	Saimiri_boliviensis_boliviensis
ENSCLAG00000015546	RNPS1	100	97.705	ENSSHAG00000016951	RNPS1	100	97.705	Sarcophilus_harrisii
ENSCLAG00000015546	RNPS1	85	73.444	ENSSFOG00015022746	RNPS1	87	67.500	Scleropages_formosus
ENSCLAG00000015546	RNPS1	85	76.987	ENSSFOG00015019341	-	75	69.295	Scleropages_formosus
ENSCLAG00000015546	RNPS1	85	67.176	ENSSDUG00000006433	-	85	67.939	Seriola_dumerili
ENSCLAG00000015546	RNPS1	85	70.833	ENSSDUG00000011453	RNPS1	84	71.369	Seriola_dumerili
ENSCLAG00000015546	RNPS1	82	65.217	ENSSLDG00000021341	RNPS1	76	67.647	Seriola_lalandi_dorsalis
ENSCLAG00000015546	RNPS1	79	97.107	ENSSARG00000001577	RNPS1	86	97.107	Sorex_araneus
ENSCLAG00000015546	RNPS1	86	93.536	ENSSPUG00000016588	RNPS1	86	93.536	Sphenodon_punctatus
ENSCLAG00000015546	RNPS1	100	99.344	ENSSSCG00000008048	RNPS1	100	99.344	Sus_scrofa
ENSCLAG00000015546	RNPS1	85	94.979	ENSTGUG00000003237	RNPS1	85	95.000	Taeniopygia_guttata
ENSCLAG00000015546	RNPS1	85	71.784	ENSTRUG00000008602	RNPS1	84	71.784	Takifugu_rubripes
ENSCLAG00000015546	RNPS1	85	72.083	ENSTNIG00000009753	RNPS1	84	72.016	Tetraodon_nigroviridis
ENSCLAG00000015546	RNPS1	89	100.000	ENSTBEG00000009098	RNPS1	100	100.000	Tupaia_belangeri
ENSCLAG00000015546	RNPS1	100	99.672	ENSTTRG00000008220	RNPS1	100	99.672	Tursiops_truncatus
ENSCLAG00000015546	RNPS1	90	100.000	ENSUAMG00000004462	RNPS1	100	100.000	Ursus_americanus
ENSCLAG00000015546	RNPS1	100	99.672	ENSUMAG00000022327	RNPS1	100	99.672	Ursus_maritimus
ENSCLAG00000015546	RNPS1	100	99.672	ENSVVUG00000009244	RNPS1	100	99.672	Vulpes_vulpes
ENSCLAG00000015546	RNPS1	81	72.174	ENSXETG00000024439	rnps1	73	72.124	Xenopus_tropicalis
ENSCLAG00000015546	RNPS1	85	67.635	ENSXMAG00000004827	RNPS1	84	64.167	Xiphophorus_maculatus