EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000015556 (Gene tree)
Gene ID: 102017622
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 11019 bases
Position: chrJH721863.1:46491031-46502049
Accession: 102017622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000022691	R3H	PF01424.22	6.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000022899	R3HCC1-201	1554	XM_005373697	ENSCLAP00000022691	517 (aa)	XP_005373754	-

Gene Model

Click here to download ENSCLAG00000015556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000015556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000015556	R3HCC1	91	73.629	ENSG00000104679	R3HCC1	100	95.349	Homo_sapiens
ENSCLAG00000015556	R3HCC1	81	36.322	ENSAPOG00000003616	r3hcc1	92	35.927	Acanthochromis_polyacanthus
ENSCLAG00000015556	R3HCC1	92	70.894	ENSAMEG00000002963	R3HCC1	93	72.584	Ailuropoda_melanoleuca
ENSCLAG00000015556	R3HCC1	82	32.468	ENSACIG00000017144	r3hcc1	95	37.500	Amphilophus_citrinellus
ENSCLAG00000015556	R3HCC1	79	35.011	ENSAOCG00000003945	r3hcc1	98	35.682	Amphiprion_ocellaris
ENSCLAG00000015556	R3HCC1	53	50.340	ENSAPEG00000003613	r3hcc1	98	35.849	Amphiprion_percula
ENSCLAG00000015556	R3HCC1	76	32.506	ENSATEG00000023860	r3hcc1	98	34.826	Anabas_testudineus
ENSCLAG00000015556	R3HCC1	85	48.261	ENSACAG00000016627	R3HCC1	99	49.015	Anolis_carolinensis
ENSCLAG00000015556	R3HCC1	84	77.904	ENSANAG00000036169	R3HCC1	94	77.169	Aotus_nancymaae
ENSCLAG00000015556	R3HCC1	84	72.045	ENSBTAG00000025830	R3HCC1	96	71.754	Bos_taurus
ENSCLAG00000015556	R3HCC1	84	76.484	ENSCJAG00000020118	R3HCC1	99	66.290	Callithrix_jacchus
ENSCLAG00000015556	R3HCC1	86	71.300	ENSCAFG00000009210	R3HCC1	97	71.011	Canis_familiaris
ENSCLAG00000015556	R3HCC1	75	68.193	ENSCAFG00020012870	R3HCC1	87	69.811	Canis_lupus_dingo
ENSCLAG00000015556	R3HCC1	83	66.815	ENSCHIG00000009107	R3HCC1	98	66.592	Capra_hircus
ENSCLAG00000015556	R3HCC1	84	79.224	ENSTSYG00000000511	R3HCC1	77	78.719	Carlito_syrichta
ENSCLAG00000015556	R3HCC1	75	73.427	ENSCAPG00000015813	R3HCC1	100	73.427	Cavia_aperea
ENSCLAG00000015556	R3HCC1	83	79.574	ENSCPOG00000009696	R3HCC1	100	79.574	Cavia_porcellus
ENSCLAG00000015556	R3HCC1	85	76.734	ENSCCAG00000037811	R3HCC1	91	76.941	Cebus_capucinus
ENSCLAG00000015556	R3HCC1	89	74.298	ENSCATG00000032971	R3HCC1	98	67.667	Cercocebus_atys
ENSCLAG00000015556	R3HCC1	90	73.305	ENSCSAG00000016250	R3HCC1	91	76.484	Chlorocebus_sabaeus
ENSCLAG00000015556	R3HCC1	85	70.337	ENSCHOG00000000396	R3HCC1	97	70.562	Choloepus_hoffmanni
ENSCLAG00000015556	R3HCC1	86	76.116	ENSCANG00000029441	R3HCC1	91	75.799	Colobus_angolensis_palliatus
ENSCLAG00000015556	R3HCC1	83	65.126	ENSCGRG00001014977	R3hcc1	98	63.214	Cricetulus_griseus_chok1gshd
ENSCLAG00000015556	R3HCC1	83	65.126	ENSCGRG00000004454	R3hcc1	98	63.214	Cricetulus_griseus_crigri
ENSCLAG00000015556	R3HCC1	81	34.722	ENSCSEG00000005748	r3hcc1	99	34.318	Cynoglossus_semilaevis
ENSCLAG00000015556	R3HCC1	72	34.430	ENSCVAG00000002640	r3hcc1	98	33.418	Cyprinodon_variegatus
ENSCLAG00000015556	R3HCC1	81	35.392	ENSDARG00000099593	r3hcc1	98	35.308	Danio_rerio
ENSCLAG00000015556	R3HCC1	88	73.581	ENSDNOG00000007168	R3HCC1	91	76.322	Dasypus_novemcinctus
ENSCLAG00000015556	R3HCC1	83	64.792	ENSDORG00000026365	R3hcc1	99	62.292	Dipodomys_ordii
ENSCLAG00000015556	R3HCC1	87	66.374	ENSETEG00000001147	R3HCC1	96	67.808	Echinops_telfairi
ENSCLAG00000015556	R3HCC1	85	73.543	ENSEASG00005018782	R3HCC1	81	73.094	Equus_asinus_asinus
ENSCLAG00000015556	R3HCC1	85	73.543	ENSECAG00000025013	R3HCC1	99	73.767	Equus_caballus
ENSCLAG00000015556	R3HCC1	86	70.089	ENSEEUG00000011918	R3HCC1	96	70.091	Erinaceus_europaeus
ENSCLAG00000015556	R3HCC1	77	36.215	ENSELUG00000023650	r3hcc1	80	42.975	Esox_lucius
ENSCLAG00000015556	R3HCC1	91	73.191	ENSFCAG00000012395	R3HCC1	98	75.000	Felis_catus
ENSCLAG00000015556	R3HCC1	65	47.904	ENSFALG00000001646	R3HCC1	61	48.193	Ficedula_albicollis
ENSCLAG00000015556	R3HCC1	84	75.435	ENSFDAG00000001572	R3HCC1	99	75.435	Fukomys_damarensis
ENSCLAG00000015556	R3HCC1	58	39.161	ENSGMOG00000017590	-	82	39.161	Gadus_morhua
ENSCLAG00000015556	R3HCC1	82	35.746	ENSGAFG00000008747	-	92	35.476	Gambusia_affinis
ENSCLAG00000015556	R3HCC1	86	35.512	ENSGACG00000008447	r3hcc1	96	34.318	Gasterosteus_aculeatus
ENSCLAG00000015556	R3HCC1	75	63.354	ENSGAGG00000018009	R3HCC1	56	63.522	Gopherus_agassizii
ENSCLAG00000015556	R3HCC1	91	74.043	ENSGGOG00000013817	R3HCC1	98	76.457	Gorilla_gorilla
ENSCLAG00000015556	R3HCC1	85	83.562	ENSHGLG00000010517	R3HCC1	97	80.810	Heterocephalus_glaber_female
ENSCLAG00000015556	R3HCC1	85	83.562	ENSHGLG00100006388	R3HCC1	97	80.810	Heterocephalus_glaber_male
ENSCLAG00000015556	R3HCC1	56	46.939	ENSHCOG00000011745	r3hcc1	94	33.257	Hippocampus_comes
ENSCLAG00000015556	R3HCC1	82	38.915	ENSIPUG00000024504	r3hcc1	87	39.858	Ictalurus_punctatus
ENSCLAG00000015556	R3HCC1	83	67.955	ENSSTOG00000027130	R3HCC1	95	67.720	Ictidomys_tridecemlineatus
ENSCLAG00000015556	R3HCC1	83	69.063	ENSJJAG00000013075	R3hcc1	99	69.063	Jaculus_jaculus
ENSCLAG00000015556	R3HCC1	78	33.732	ENSKMAG00000000286	r3hcc1	99	35.024	Kryptolebias_marmoratus
ENSCLAG00000015556	R3HCC1	82	38.702	ENSLACG00000011894	R3HCC1	97	38.702	Latimeria_chalumnae
ENSCLAG00000015556	R3HCC1	82	37.868	ENSLOCG00000015442	r3hcc1	99	36.386	Lepisosteus_oculatus
ENSCLAG00000015556	R3HCC1	87	69.153	ENSLAFG00000016137	R3HCC1	95	69.958	Loxodonta_africana
ENSCLAG00000015556	R3HCC1	89	74.514	ENSMFAG00000032894	R3HCC1	98	67.898	Macaca_fascicularis
ENSCLAG00000015556	R3HCC1	89	74.514	ENSMMUG00000016655	R3HCC1	90	76.484	Macaca_mulatta
ENSCLAG00000015556	R3HCC1	89	73.866	ENSMNEG00000043283	R3HCC1	98	67.206	Macaca_nemestrina
ENSCLAG00000015556	R3HCC1	89	74.353	ENSMLEG00000030147	R3HCC1	91	76.256	Mandrillus_leucophaeus
ENSCLAG00000015556	R3HCC1	78	33.097	ENSMAMG00000018146	r3hcc1	99	33.654	Mastacembelus_armatus
ENSCLAG00000015556	R3HCC1	86	47.241	ENSMGAG00000001356	R3HCC1	92	47.534	Meleagris_gallopavo
ENSCLAG00000015556	R3HCC1	79	79.866	ENSMAUG00000016096	R3hcc1	98	66.595	Mesocricetus_auratus
ENSCLAG00000015556	R3HCC1	86	76.786	ENSMICG00000011146	R3HCC1	94	77.574	Microcebus_murinus
ENSCLAG00000015556	R3HCC1	79	82.353	ENSMOCG00000018508	R3hcc1	98	61.506	Microtus_ochrogaster
ENSCLAG00000015556	R3HCC1	82	48.758	ENSMODG00000016809	-	100	48.107	Monodelphis_domestica
ENSCLAG00000015556	R3HCC1	77	33.333	ENSMALG00000000731	r3hcc1	98	33.580	Monopterus_albus
ENSCLAG00000015556	R3HCC1	83	63.786	ENSMUSG00000034194	R3hcc1	99	52.727	Mus_musculus
ENSCLAG00000015556	R3HCC1	83	61.179	MGP_PahariEiJ_G0030484	R3hcc1	99	60.976	Mus_pahari
ENSCLAG00000015556	R3HCC1	83	63.244	MGP_SPRETEiJ_G0020359	R3hcc1	99	52.218	Mus_spretus
ENSCLAG00000015556	R3HCC1	91	71.125	ENSMPUG00000003457	R3HCC1	88	72.360	Mustela_putorius_furo
ENSCLAG00000015556	R3HCC1	91	69.556	ENSMLUG00000000266	R3HCC1	97	70.085	Myotis_lucifugus
ENSCLAG00000015556	R3HCC1	83	73.951	ENSNGAG00000016747	R3hcc1	99	73.684	Nannospalax_galili
ENSCLAG00000015556	R3HCC1	76	76.000	ENSNLEG00000015944	R3HCC1	86	75.124	Nomascus_leucogenys
ENSCLAG00000015556	R3HCC1	83	57.306	ENSMEUG00000010587	R3HCC1	98	57.306	Notamacropus_eugenii
ENSCLAG00000015556	R3HCC1	87	69.978	ENSOPRG00000013390	R3HCC1	96	70.136	Ochotona_princeps
ENSCLAG00000015556	R3HCC1	82	80.087	ENSODEG00000007529	R3HCC1	99	80.983	Octodon_degus
ENSCLAG00000015556	R3HCC1	84	55.830	ENSOANG00000013877	R3HCC1	98	56.769	Ornithorhynchus_anatinus
ENSCLAG00000015556	R3HCC1	84	71.625	ENSOCUG00000023554	R3HCC1	85	71.625	Oryctolagus_cuniculus
ENSCLAG00000015556	R3HCC1	78	34.474	ENSORLG00000016816	r3hcc1	99	35.208	Oryzias_latipes
ENSCLAG00000015556	R3HCC1	78	34.474	ENSORLG00020012005	r3hcc1	99	35.208	Oryzias_latipes_hni
ENSCLAG00000015556	R3HCC1	78	34.474	ENSORLG00015007018	r3hcc1	99	35.208	Oryzias_latipes_hsok
ENSCLAG00000015556	R3HCC1	78	34.834	ENSOMEG00000000816	r3hcc1	99	34.834	Oryzias_melastigma
ENSCLAG00000015556	R3HCC1	86	72.545	ENSOGAG00000001291	R3HCC1	93	72.460	Otolemur_garnettii
ENSCLAG00000015556	R3HCC1	91	69.409	ENSOARG00000010146	R3HCC1	96	71.461	Ovis_aries
ENSCLAG00000015556	R3HCC1	91	73.629	ENSPPAG00000033165	R3HCC1	98	75.520	Pan_paniscus
ENSCLAG00000015556	R3HCC1	83	74.884	ENSPPRG00000002522	R3HCC1	99	75.349	Panthera_pardus
ENSCLAG00000015556	R3HCC1	76	73.165	ENSPTIG00000011230	R3HCC1	95	73.232	Panthera_tigris_altaica
ENSCLAG00000015556	R3HCC1	91	74.262	ENSPTRG00000020076	R3HCC1	98	70.208	Pan_troglodytes
ENSCLAG00000015556	R3HCC1	89	74.353	ENSPANG00000000453	R3HCC1	91	76.256	Papio_anubis
ENSCLAG00000015556	R3HCC1	75	36.432	ENSPKIG00000014426	-	95	36.181	Paramormyrops_kingsleyae
ENSCLAG00000015556	R3HCC1	75	36.816	ENSPKIG00000020397	-	94	36.990	Paramormyrops_kingsleyae
ENSCLAG00000015556	R3HCC1	83	49.351	ENSPSIG00000017664	R3HCC1	98	47.403	Pelodiscus_sinensis
ENSCLAG00000015556	R3HCC1	83	64.927	ENSPEMG00000007118	R3hcc1	99	64.092	Peromyscus_maniculatus_bairdii
ENSCLAG00000015556	R3HCC1	75	51.351	ENSPCIG00000022718	-	83	51.351	Phascolarctos_cinereus
ENSCLAG00000015556	R3HCC1	81	36.902	ENSPFOG00000022301	r3hcc1	90	36.659	Poecilia_formosa
ENSCLAG00000015556	R3HCC1	81	35.033	ENSPLAG00000010794	r3hcc1	90	36.092	Poecilia_latipinna
ENSCLAG00000015556	R3HCC1	81	36.902	ENSPMEG00000022515	r3hcc1	90	36.659	Poecilia_mexicana
ENSCLAG00000015556	R3HCC1	81	35.780	ENSPREG00000000713	r3hcc1	90	35.714	Poecilia_reticulata
ENSCLAG00000015556	R3HCC1	76	75.689	ENSPPYG00000018436	R3HCC1	98	74.937	Pongo_abelii
ENSCLAG00000015556	R3HCC1	66	83.784	ENSPCAG00000012229	R3HCC1	72	83.784	Procavia_capensis
ENSCLAG00000015556	R3HCC1	83	76.620	ENSPCOG00000027554	R3HCC1	98	76.389	Propithecus_coquereli
ENSCLAG00000015556	R3HCC1	86	72.088	ENSPVAG00000009829	R3HCC1	96	72.748	Pteropus_vampyrus
ENSCLAG00000015556	R3HCC1	79	36.520	ENSPNAG00000023875	r3hcc1	99	35.539	Pygocentrus_nattereri
ENSCLAG00000015556	R3HCC1	83	77.136	ENSRBIG00000028045	R3HCC1	98	76.443	Rhinopithecus_bieti
ENSCLAG00000015556	R3HCC1	90	74.786	ENSRROG00000031126	R3HCC1	98	68.360	Rhinopithecus_roxellana
ENSCLAG00000015556	R3HCC1	83	75.982	ENSSBOG00000022590	R3HCC1	98	75.289	Saimiri_boliviensis_boliviensis
ENSCLAG00000015556	R3HCC1	83	49.778	ENSSHAG00000016526	-	98	49.778	Sarcophilus_harrisii
ENSCLAG00000015556	R3HCC1	76	37.129	ENSSFOG00015013507	r3hcc1	98	35.949	Scleropages_formosus
ENSCLAG00000015556	R3HCC1	78	32.697	ENSSMAG00000008647	r3hcc1	99	32.933	Scophthalmus_maximus
ENSCLAG00000015556	R3HCC1	81	34.910	ENSSDUG00000022786	r3hcc1	97	35.845	Seriola_dumerili
ENSCLAG00000015556	R3HCC1	81	36.073	ENSSLDG00000019031	r3hcc1	97	36.530	Seriola_lalandi_dorsalis
ENSCLAG00000015556	R3HCC1	79	34.524	ENSSPAG00000013497	r3hcc1	98	34.524	Stegastes_partitus
ENSCLAG00000015556	R3HCC1	89	71.983	ENSSSCG00000039915	-	93	74.429	Sus_scrofa
ENSCLAG00000015556	R3HCC1	88	65.727	ENSSSCG00000037347	-	91	66.667	Sus_scrofa
ENSCLAG00000015556	R3HCC1	80	35.059	ENSTRUG00000015880	r3hcc1	98	35.059	Takifugu_rubripes
ENSCLAG00000015556	R3HCC1	86	66.890	ENSTTRG00000012247	R3HCC1	97	67.040	Tursiops_truncatus
ENSCLAG00000015556	R3HCC1	85	72.273	ENSUAMG00000007344	R3HCC1	100	72.273	Ursus_americanus
ENSCLAG00000015556	R3HCC1	90	69.936	ENSVVUG00000005056	R3HCC1	97	71.910	Vulpes_vulpes
ENSCLAG00000015556	R3HCC1	79	34.689	ENSXCOG00000017626	r3hcc1	89	35.252	Xiphophorus_couchianus
ENSCLAG00000015556	R3HCC1	82	34.633	ENSXMAG00000018375	r3hcc1	92	35.859	Xiphophorus_maculatus