EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000015998 (Gene tree)
Gene ID: 102020805
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 56244 bases
Position: chrJH721878.1:1213503-1269746
Accession: 102020805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000023329	RRM_5	PF13893.6	1.6e-06	1	1
ENSCLAP00000023330	RRM_5	PF13893.6	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000023551	-	2538	-	ENSCLAP00000023330	845 (aa)	-	-
ENSCLAT00000023550	-	2723	XM_005382079	ENSCLAP00000023329	847 (aa)	XP_005382136	UPI00038EE4FE
ENSCLAT00000023549	-	4209	-	ENSCLAP00000023328	60 (aa)	-	UPI0004620F40

Gene Model

Click here to download ENSCLAG00000015998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000015998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000015998	-	99	98.700	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSCLAG00000015998	-	99	93.527	ENSAMEG00000011347	-	100	93.527	Ailuropoda_melanoleuca
ENSCLAG00000015998	-	100	77.486	ENSAPLG00000008118	-	77	86.325	Anas_platyrhynchos
ENSCLAG00000015998	-	99	71.977	ENSACAG00000016233	-	99	71.332	Anolis_carolinensis
ENSCLAG00000015998	-	99	98.345	ENSANAG00000022951	-	99	98.345	Aotus_nancymaae
ENSCLAG00000015998	-	83	72.586	ENSANAG00000024654	-	99	72.586	Aotus_nancymaae
ENSCLAG00000015998	-	86	33.409	ENSAMXG00000010681	matr3l1.1	74	48.148	Astyanax_mexicanus
ENSCLAG00000015998	-	85	30.023	ENSAMXG00000010685	matr3l1.1	86	30.886	Astyanax_mexicanus
ENSCLAG00000015998	-	94	92.993	ENSBTAG00000006756	MATR3	99	92.993	Bos_taurus
ENSCLAG00000015998	-	99	93.065	ENSCJAG00000006888	-	99	97.436	Callithrix_jacchus
ENSCLAG00000015998	-	100	98.233	ENSCAFG00000001345	MATR3	100	98.233	Canis_familiaris
ENSCLAG00000015998	-	99	96.362	ENSCAFG00020010504	-	98	98.609	Canis_lupus_dingo
ENSCLAG00000015998	-	100	98.704	ENSCHIG00000025746	-	100	98.704	Capra_hircus
ENSCLAG00000015998	-	99	98.700	ENSTSYG00000011028	-	99	98.700	Carlito_syrichta
ENSCLAG00000015998	-	100	99.528	ENSCPOG00000014076	-	100	99.528	Cavia_porcellus
ENSCLAG00000015998	-	99	98.582	ENSCCAG00000025074	-	99	98.582	Cebus_capucinus
ENSCLAG00000015998	-	65	97.628	ENSCATG00000041304	-	98	97.628	Cercocebus_atys
ENSCLAG00000015998	-	99	98.936	ENSCSAG00000013075	-	99	98.936	Chlorocebus_sabaeus
ENSCLAG00000015998	-	100	76.342	ENSCPBG00000006303	-	100	75.329	Chrysemys_picta_bellii
ENSCLAG00000015998	-	99	97.633	ENSCANG00000028224	-	99	97.633	Colobus_angolensis_palliatus
ENSCLAG00000015998	-	99	98.345	ENSCGRG00001020227	Matr3	99	98.345	Cricetulus_griseus_chok1gshd
ENSCLAG00000015998	-	99	98.227	ENSCGRG00000011298	Matr3	99	98.227	Cricetulus_griseus_crigri
ENSCLAG00000015998	-	69	54.902	ENSCGRG00000008044	Zfp638	50	54.902	Cricetulus_griseus_crigri
ENSCLAG00000015998	-	89	32.143	ENSCSEG00000012682	matr3l1.1	81	32.143	Cynoglossus_semilaevis
ENSCLAG00000015998	-	84	36.170	ENSCVAG00000005337	matr3l1.1	81	31.081	Cyprinodon_variegatus
ENSCLAG00000015998	-	100	93.207	ENSDNOG00000037723	-	100	93.207	Dasypus_novemcinctus
ENSCLAG00000015998	-	100	98.704	ENSEASG00005020857	-	100	98.704	Equus_asinus_asinus
ENSCLAG00000015998	-	100	98.587	ENSECAG00000012882	MATR3	100	98.587	Equus_caballus
ENSCLAG00000015998	-	86	36.471	ENSELUG00000021848	matr3l1.1	59	52.381	Esox_lucius
ENSCLAG00000015998	-	78	42.718	ENSELUG00000021651	si:ch211-271b14.1	86	42.718	Esox_lucius
ENSCLAG00000015998	-	100	98.587	ENSFCAG00000021911	-	100	98.587	Felis_catus
ENSCLAG00000015998	-	100	75.711	ENSFALG00000003071	-	77	85.816	Ficedula_albicollis
ENSCLAG00000015998	-	100	98.111	ENSFDAG00000017675	-	100	98.111	Fukomys_damarensis
ENSCLAG00000015998	-	100	76.999	ENSGALG00000002478	MATR3	77	85.613	Gallus_gallus
ENSCLAG00000015998	-	100	76.175	ENSGAGG00000011386	-	100	73.904	Gopherus_agassizii
ENSCLAG00000015998	-	99	98.818	ENSGGOG00000007308	-	99	98.818	Gorilla_gorilla
ENSCLAG00000015998	-	100	99.292	ENSHGLG00000004673	MATR3	100	99.292	Heterocephalus_glaber_female
ENSCLAG00000015998	-	60	98.821	ENSHGLG00100006442	-	100	98.821	Heterocephalus_glaber_male
ENSCLAG00000015998	-	55	37.222	ENSHCOG00000013223	matr3l1.1	83	31.320	Hippocampus_comes
ENSCLAG00000015998	-	100	98.587	ENSSTOG00000014746	-	100	98.587	Ictidomys_tridecemlineatus
ENSCLAG00000015998	-	99	97.872	ENSJJAG00000021710	-	99	97.872	Jaculus_jaculus
ENSCLAG00000015998	-	60	71.063	ENSJJAG00000011022	-	99	70.079	Jaculus_jaculus
ENSCLAG00000015998	-	51	39.665	ENSLBEG00000018267	matr3l1.1	85	38.596	Labrus_bergylta
ENSCLAG00000015998	-	99	55.700	ENSLACG00000006743	-	99	56.786	Latimeria_chalumnae
ENSCLAG00000015998	-	99	93.736	ENSMFAG00000000634	-	98	97.810	Macaca_fascicularis
ENSCLAG00000015998	-	94	98.864	ENSMMUG00000016741	MATR3	99	98.864	Macaca_mulatta
ENSCLAG00000015998	-	60	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSCLAG00000015998	-	99	99.054	ENSMNEG00000042856	-	99	99.054	Macaca_nemestrina
ENSCLAG00000015998	-	99	99.054	ENSMLEG00000041178	-	99	99.054	Mandrillus_leucophaeus
ENSCLAG00000015998	-	75	48.235	ENSMAMG00000013840	matr3l1.1	76	41.379	Mastacembelus_armatus
ENSCLAG00000015998	-	100	76.889	ENSMGAG00000001331	-	77	85.470	Meleagris_gallopavo
ENSCLAG00000015998	-	99	98.109	ENSMAUG00000011647	Matr3	99	98.109	Mesocricetus_auratus
ENSCLAG00000015998	-	64	95.413	ENSMICG00000012438	-	99	97.211	Microcebus_murinus
ENSCLAG00000015998	-	99	98.109	ENSMOCG00000015711	Matr3	99	98.109	Microtus_ochrogaster
ENSCLAG00000015998	-	100	91.218	ENSMODG00000011925	-	99	89.461	Monodelphis_domestica
ENSCLAG00000015998	-	99	98.227	MGP_CAROLIEiJ_G0022108	Matr3	99	98.227	Mus_caroli
ENSCLAG00000015998	-	99	98.227	ENSMUSG00000037236	Matr3	99	98.227	Mus_musculus
ENSCLAG00000015998	-	99	98.227	MGP_PahariEiJ_G0018842	Matr3	99	98.227	Mus_pahari
ENSCLAG00000015998	-	99	97.872	MGP_SPRETEiJ_G0023020	Matr3	99	97.872	Mus_spretus
ENSCLAG00000015998	-	100	96.991	ENSMPUG00000009297	-	100	96.991	Mustela_putorius_furo
ENSCLAG00000015998	-	99	97.409	ENSMLUG00000005798	-	99	97.409	Myotis_lucifugus
ENSCLAG00000015998	-	99	98.700	ENSNGAG00000017452	Matr3	99	98.700	Nannospalax_galili
ENSCLAG00000015998	-	99	99.054	ENSNLEG00000009093	-	99	99.054	Nomascus_leucogenys
ENSCLAG00000015998	-	99	90.734	ENSOPRG00000016511	-	100	90.734	Ochotona_princeps
ENSCLAG00000015998	-	100	99.174	ENSODEG00000003015	-	100	99.174	Octodon_degus
ENSCLAG00000015998	-	100	98.701	ENSOCUG00000026311	MATR3	100	98.701	Oryctolagus_cuniculus
ENSCLAG00000015998	-	69	37.121	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
ENSCLAG00000015998	-	64	48.148	ENSORLG00015018551	matr3l1.1	79	33.333	Oryzias_latipes_hsok
ENSCLAG00000015998	-	69	34.426	ENSOMEG00000022287	matr3l1.1	80	32.305	Oryzias_melastigma
ENSCLAG00000015998	-	99	99.291	ENSOGAG00000010607	-	99	99.291	Otolemur_garnettii
ENSCLAG00000015998	-	100	98.704	ENSOARG00000016931	-	99	98.704	Ovis_aries
ENSCLAG00000015998	-	99	93.512	ENSPPAG00000001418	-	98	97.445	Pan_paniscus
ENSCLAG00000015998	-	65	93.236	ENSPPAG00000026720	-	99	93.236	Pan_paniscus
ENSCLAG00000015998	-	100	98.704	ENSPPRG00000008004	-	100	98.704	Panthera_pardus
ENSCLAG00000015998	-	96	98.645	ENSPTIG00000010711	-	100	98.645	Panthera_tigris_altaica
ENSCLAG00000015998	-	99	93.512	ENSPTRG00000017294	MATR3	98	97.445	Pan_troglodytes
ENSCLAG00000015998	-	65	98.355	ENSPANG00000032489	-	99	98.355	Papio_anubis
ENSCLAG00000015998	-	99	97.751	ENSPANG00000012018	-	99	97.751	Papio_anubis
ENSCLAG00000015998	-	96	33.632	ENSPKIG00000000333	matr3l1.1	53	41.379	Paramormyrops_kingsleyae
ENSCLAG00000015998	-	100	76.915	ENSPSIG00000014598	-	77	86.610	Pelodiscus_sinensis
ENSCLAG00000015998	-	99	97.754	ENSPEMG00000020679	Matr3	99	97.754	Peromyscus_maniculatus_bairdii
ENSCLAG00000015998	-	99	93.736	ENSPPYG00000015835	-	99	93.736	Pongo_abelii
ENSCLAG00000015998	-	99	98.582	ENSPCOG00000025718	-	99	98.582	Propithecus_coquereli
ENSCLAG00000015998	-	98	93.629	ENSPVAG00000015431	-	100	93.629	Pteropus_vampyrus
ENSCLAG00000015998	-	99	97.991	ENSRNOG00000019875	Matr3	99	97.991	Rattus_norvegicus
ENSCLAG00000015998	-	65	97.810	ENSRBIG00000034713	-	98	97.810	Rhinopithecus_bieti
ENSCLAG00000015998	-	99	97.400	ENSRROG00000043949	-	99	97.400	Rhinopithecus_roxellana
ENSCLAG00000015998	-	99	96.805	ENSRROG00000039415	-	99	98.622	Rhinopithecus_roxellana
ENSCLAG00000015998	-	99	98.463	ENSSBOG00000030159	-	99	98.463	Saimiri_boliviensis_boliviensis
ENSCLAG00000015998	-	100	91.335	ENSSHAG00000010331	-	99	89.578	Sarcophilus_harrisii
ENSCLAG00000015998	-	62	55.556	ENSSDUG00000015369	matr3l1.1	59	51.515	Seriola_dumerili
ENSCLAG00000015998	-	99	75.711	ENSSPUG00000019236	-	99	74.917	Sphenodon_punctatus
ENSCLAG00000015998	-	100	98.587	ENSSSCG00000014343	-	100	98.587	Sus_scrofa
ENSCLAG00000015998	-	100	76.696	ENSTGUG00000014568	MATR3	100	75.246	Taeniopygia_guttata
ENSCLAG00000015998	-	61	57.143	ENSTNIG00000003166	matr3l1.1	87	57.143	Tetraodon_nigroviridis
ENSCLAG00000015998	-	85	98.748	ENSUAMG00000000097	-	97	98.748	Ursus_americanus
ENSCLAG00000015998	-	100	98.115	ENSUMAG00000015808	-	100	98.115	Ursus_maritimus
ENSCLAG00000015998	-	100	92.770	ENSVPAG00000006337	-	100	92.770	Vicugna_pacos
ENSCLAG00000015998	-	100	98.469	ENSVVUG00000020287	-	100	98.469	Vulpes_vulpes
ENSCLAG00000015998	-	80	59.424	ENSXETG00000003838	matr3	75	58.705	Xenopus_tropicalis
ENSCLAG00000015998	-	68	34.343	ENSXMAG00000014107	-	70	57.143	Xiphophorus_maculatus