EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016030 (Gene tree)
Gene ID: 102020236
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 18755 bases
Position: chrJH721873.1:7089719-7108473
Accession: 102020236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000023369	CSD	PF00313.22	3.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000023590	YBX3-201	918	XM_013511652	ENSCLAP00000023369	305 (aa)	XP_013367106	-

Gene Model

Click here to download ENSCLAG00000016030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016030	YBX3	93	52.069	ENSCLAG00000002253	YBX1	100	56.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016030	YBX3	94	87.108	ENSG00000060138	YBX3	91	96.429	Homo_sapiens
ENSCLAG00000016030	YBX3	94	91.259	ENSAMEG00000009393	YBX3	81	91.259	Ailuropoda_melanoleuca
ENSCLAG00000016030	YBX3	93	68.403	ENSAPLG00000003147	YBX3	100	68.403	Anas_platyrhynchos
ENSCLAG00000016030	YBX3	94	87.108	ENSANAG00000024492	-	91	87.108	Aotus_nancymaae
ENSCLAG00000016030	YBX3	94	90.559	ENSBTAG00000009663	YBX3	76	87.413	Bos_taurus
ENSCLAG00000016030	YBX3	94	87.108	ENSCJAG00000021660	-	78	87.108	Callithrix_jacchus
ENSCLAG00000016030	YBX3	68	83.824	ENSCJAG00000033824	-	78	83.824	Callithrix_jacchus
ENSCLAG00000016030	YBX3	95	89.965	ENSCAFG00000013401	YBX3	87	90.876	Canis_familiaris
ENSCLAG00000016030	YBX3	94	87.063	ENSCAFG00020006412	YBX3	76	87.063	Canis_lupus_dingo
ENSCLAG00000016030	YBX3	94	89.860	ENSCHIG00000010863	YBX3	80	89.860	Capra_hircus
ENSCLAG00000016030	YBX3	94	54.545	ENSTSYG00000035821	-	70	94.318	Carlito_syrichta
ENSCLAG00000016030	YBX3	98	87.500	ENSTSYG00000004204	-	93	87.500	Carlito_syrichta
ENSCLAG00000016030	YBX3	96	96.587	ENSCAPG00000015039	YBX3	95	96.587	Cavia_aperea
ENSCLAG00000016030	YBX3	94	95.804	ENSCPOG00000011329	YBX3	84	95.804	Cavia_porcellus
ENSCLAG00000016030	YBX3	94	86.760	ENSCCAG00000016469	YBX3	77	86.760	Cebus_capucinus
ENSCLAG00000016030	YBX3	94	86.411	ENSCATG00000034411	YBX3	77	86.411	Cercocebus_atys
ENSCLAG00000016030	YBX3	94	86.760	ENSCSAG00000008744	YBX3	77	86.760	Chlorocebus_sabaeus
ENSCLAG00000016030	YBX3	94	77.700	ENSCPBG00000014147	YBX3	80	77.700	Chrysemys_picta_bellii
ENSCLAG00000016030	YBX3	94	87.108	ENSCANG00000036801	YBX3	91	87.108	Colobus_angolensis_palliatus
ENSCLAG00000016030	YBX3	94	89.860	ENSCGRG00001016148	Ybx3	79	89.860	Cricetulus_griseus_chok1gshd
ENSCLAG00000016030	YBX3	95	88.475	ENSCGRG00000004563	Ybx3	99	88.475	Cricetulus_griseus_crigri
ENSCLAG00000016030	YBX3	100	84.345	ENSDORG00000009103	Ybx3	88	85.942	Dipodomys_ordii
ENSCLAG00000016030	YBX3	93	81.053	ENSETEG00000002557	YBX3	99	79.225	Echinops_telfairi
ENSCLAG00000016030	YBX3	94	84.965	ENSEASG00005014726	YBX3	76	84.965	Equus_asinus_asinus
ENSCLAG00000016030	YBX3	94	88.112	ENSECAG00000013777	YBX3	77	88.112	Equus_caballus
ENSCLAG00000016030	YBX3	93	87.324	ENSEEUG00000010415	YBX3	100	87.676	Erinaceus_europaeus
ENSCLAG00000016030	YBX3	94	88.153	ENSFCAG00000027748	YBX3	77	88.153	Felis_catus
ENSCLAG00000016030	YBX3	93	65.157	ENSFALG00000003661	YBX3	100	62.976	Ficedula_albicollis
ENSCLAG00000016030	YBX3	97	91.216	ENSFDAG00000021192	YBX3	95	91.216	Fukomys_damarensis
ENSCLAG00000016030	YBX3	94	60.140	ENSGALG00000031890	YBX3	74	59.441	Gallus_gallus
ENSCLAG00000016030	YBX3	94	76.307	ENSGAGG00000017780	YBX3	82	74.582	Gopherus_agassizii
ENSCLAG00000016030	YBX3	94	87.108	ENSGGOG00000001352	YBX3	77	87.108	Gorilla_gorilla
ENSCLAG00000016030	YBX3	94	83.103	ENSHGLG00000014798	-	85	83.448	Heterocephalus_glaber_female
ENSCLAG00000016030	YBX3	87	84.211	ENSHGLG00000015495	-	78	82.264	Heterocephalus_glaber_female
ENSCLAG00000016030	YBX3	69	98.214	ENSHGLG00100003589	YBX3	92	67.114	Heterocephalus_glaber_male
ENSCLAG00000016030	YBX3	94	84.615	ENSSTOG00000032577	-	81	84.615	Ictidomys_tridecemlineatus
ENSCLAG00000016030	YBX3	97	82.095	ENSSTOG00000002108	-	91	82.095	Ictidomys_tridecemlineatus
ENSCLAG00000016030	YBX3	94	68.056	ENSJJAG00000014239	Ybx3	92	82.500	Jaculus_jaculus
ENSCLAG00000016030	YBX3	94	89.860	ENSLAFG00000017247	YBX3	83	86.121	Loxodonta_africana
ENSCLAG00000016030	YBX3	94	86.760	ENSMFAG00000039369	YBX3	77	86.760	Macaca_fascicularis
ENSCLAG00000016030	YBX3	94	86.760	ENSMMUG00000022469	YBX3	88	86.760	Macaca_mulatta
ENSCLAG00000016030	YBX3	94	86.760	ENSMNEG00000045109	YBX3	77	86.760	Macaca_nemestrina
ENSCLAG00000016030	YBX3	97	88.215	ENSMLEG00000033618	YBX3	84	88.215	Mandrillus_leucophaeus
ENSCLAG00000016030	YBX3	93	66.316	ENSMGAG00000014224	YBX3	99	63.390	Meleagris_gallopavo
ENSCLAG00000016030	YBX3	94	89.860	ENSMAUG00000012185	Ybx3	89	89.860	Mesocricetus_auratus
ENSCLAG00000016030	YBX3	94	91.259	ENSMICG00000038002	-	77	91.259	Microcebus_murinus
ENSCLAG00000016030	YBX3	76	79.167	ENSMICG00000031459	-	75	77.143	Microcebus_murinus
ENSCLAG00000016030	YBX3	94	89.161	ENSMOCG00000016291	Ybx3	93	89.161	Microtus_ochrogaster
ENSCLAG00000016030	YBX3	96	82.993	ENSMODG00000018248	YBX3	96	80.731	Monodelphis_domestica
ENSCLAG00000016030	YBX3	94	89.161	MGP_CAROLIEiJ_G0028947	Ybx3	79	89.161	Mus_caroli
ENSCLAG00000016030	YBX3	94	89.161	ENSMUSG00000030189	Ybx3	79	89.161	Mus_musculus
ENSCLAG00000016030	YBX3	94	89.860	MGP_PahariEiJ_G0022709	Ybx3	79	89.860	Mus_pahari
ENSCLAG00000016030	YBX3	94	89.510	MGP_SPRETEiJ_G0029994	Ybx3	79	89.510	Mus_spretus
ENSCLAG00000016030	YBX3	94	71.864	ENSMPUG00000011810	YBX3	78	71.186	Mustela_putorius_furo
ENSCLAG00000016030	YBX3	87	88.476	ENSMLUG00000007476	YBX3	100	86.245	Myotis_lucifugus
ENSCLAG00000016030	YBX3	92	84.859	ENSNGAG00000000710	Ybx3	88	62.324	Nannospalax_galili
ENSCLAG00000016030	YBX3	94	84.669	ENSNLEG00000034844	YBX3	81	82.927	Nomascus_leucogenys
ENSCLAG00000016030	YBX3	57	75.723	ENSMEUG00000002507	-	81	75.723	Notamacropus_eugenii
ENSCLAG00000016030	YBX3	94	90.909	ENSODEG00000017957	YBX3	84	90.909	Octodon_degus
ENSCLAG00000016030	YBX3	89	89.299	ENSOCUG00000001889	YBX3	81	86.833	Oryctolagus_cuniculus
ENSCLAG00000016030	YBX3	94	88.396	ENSOGAG00000013245	YBX3	78	88.396	Otolemur_garnettii
ENSCLAG00000016030	YBX3	94	81.250	ENSOARG00000020919	YBX3	97	79.725	Ovis_aries
ENSCLAG00000016030	YBX3	94	87.108	ENSPPAG00000039068	YBX3	80	87.108	Pan_paniscus
ENSCLAG00000016030	YBX3	94	88.502	ENSPPRG00000005859	YBX3	77	88.502	Panthera_pardus
ENSCLAG00000016030	YBX3	93	91.197	ENSPTIG00000005322	YBX3	83	90.476	Panthera_tigris_altaica
ENSCLAG00000016030	YBX3	94	87.108	ENSPTRG00000004681	YBX3	77	87.108	Pan_troglodytes
ENSCLAG00000016030	YBX3	94	86.411	ENSPANG00000010280	YBX3	77	86.411	Papio_anubis
ENSCLAG00000016030	YBX3	63	100.000	ENSPSIG00000009247	YBX3	92	100.000	Pelodiscus_sinensis
ENSCLAG00000016030	YBX3	94	90.210	ENSPEMG00000012132	-	90	90.210	Peromyscus_maniculatus_bairdii
ENSCLAG00000016030	YBX3	65	97.727	ENSPEMG00000010391	-	70	88.000	Peromyscus_maniculatus_bairdii
ENSCLAG00000016030	YBX3	85	80.695	ENSPCIG00000029949	YBX3	100	80.695	Phascolarctos_cinereus
ENSCLAG00000016030	YBX3	94	86.760	ENSPPYG00000004279	YBX3	77	86.760	Pongo_abelii
ENSCLAG00000016030	YBX3	68	90.338	ENSPCAG00000001397	YBX3	70	90.050	Procavia_capensis
ENSCLAG00000016030	YBX3	57	85.143	ENSPCOG00000011663	YBX3	67	85.143	Propithecus_coquereli
ENSCLAG00000016030	YBX3	94	75.261	ENSPVAG00000006740	YBX3	54	92.040	Pteropus_vampyrus
ENSCLAG00000016030	YBX3	94	90.210	ENSRNOG00000005480	Ybx3	79	90.210	Rattus_norvegicus
ENSCLAG00000016030	YBX3	94	86.760	ENSRBIG00000039208	YBX3	77	86.760	Rhinopithecus_bieti
ENSCLAG00000016030	YBX3	94	86.760	ENSRROG00000029638	YBX3	77	86.760	Rhinopithecus_roxellana
ENSCLAG00000016030	YBX3	97	88.889	ENSSBOG00000030573	YBX3	86	88.889	Saimiri_boliviensis_boliviensis
ENSCLAG00000016030	YBX3	93	78.694	ENSSHAG00000003262	YBX3	98	78.007	Sarcophilus_harrisii
ENSCLAG00000016030	YBX3	94	89.199	ENSSSCG00000000633	YBX3	75	89.199	Sus_scrofa
ENSCLAG00000016030	YBX3	93	67.133	ENSTGUG00000012047	YBX3	100	67.133	Taeniopygia_guttata
ENSCLAG00000016030	YBX3	94	89.199	ENSTBEG00000012570	YBX3	79	89.199	Tupaia_belangeri
ENSCLAG00000016030	YBX3	86	82.331	ENSTTRG00000008045	YBX3	100	81.955	Tursiops_truncatus
ENSCLAG00000016030	YBX3	91	88.087	ENSUAMG00000016662	YBX3	100	88.087	Ursus_americanus
ENSCLAG00000016030	YBX3	93	91.549	ENSUMAG00000016118	YBX3	97	90.816	Ursus_maritimus
ENSCLAG00000016030	YBX3	93	67.254	ENSVPAG00000000876	YBX3	100	67.254	Vicugna_pacos
ENSCLAG00000016030	YBX3	91	87.004	ENSVVUG00000004956	YBX3	100	87.004	Vulpes_vulpes
ENSCLAG00000016030	YBX3	64	90.909	ENSXETG00000016239	ybx3	90	56.122	Xenopus_tropicalis