EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016242 (Gene tree)
Gene ID: 102016642
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 37788 bases
Position: chrJH721902.1:13200440-13238227
Accession: 102016642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000023671	MMR_HSR1	PF01926.23	8.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000023896	SRL-201	1419	XM_005391314	ENSCLAP00000023671	472 (aa)	XP_005391371	-

Gene Model

Click here to download ENSCLAG00000016242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016242	SRL	77	34.247	ENSCLAG00000016412	EHD1	67	34.247
ENSCLAG00000016242	SRL	82	32.648	ENSCLAG00000001756	EHD2	68	32.812
ENSCLAG00000016242	SRL	79	32.440	ENSCLAG00000010983	EHD3	67	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016242	SRL	100	96.195	ENSG00000185739	SRL	100	97.680	Homo_sapiens
ENSCLAG00000016242	SRL	94	76.471	ENSAPOG00000012432	SRL	98	74.944	Acanthochromis_polyacanthus
ENSCLAG00000016242	SRL	100	80.720	ENSAPOG00000018093	srl	100	83.333	Acanthochromis_polyacanthus
ENSCLAG00000016242	SRL	98	96.537	ENSAMEG00000010862	SRL	52	96.537	Ailuropoda_melanoleuca
ENSCLAG00000016242	SRL	96	82.965	ENSACIG00000015799	srl	99	82.965	Amphilophus_citrinellus
ENSCLAG00000016242	SRL	94	75.450	ENSACIG00000015419	SRL	99	75.450	Amphilophus_citrinellus
ENSCLAG00000016242	SRL	92	84.101	ENSAOCG00000007574	srl	100	84.101	Amphiprion_ocellaris
ENSCLAG00000016242	SRL	96	74.561	ENSAOCG00000017049	SRL	99	74.561	Amphiprion_ocellaris
ENSCLAG00000016242	SRL	100	80.932	ENSAPEG00000006911	srl	96	82.743	Amphiprion_percula
ENSCLAG00000016242	SRL	96	70.989	ENSAPEG00000006533	SRL	99	70.769	Amphiprion_percula
ENSCLAG00000016242	SRL	94	73.626	ENSATEG00000009643	SRL	52	72.747	Anabas_testudineus
ENSCLAG00000016242	SRL	100	80.720	ENSATEG00000024315	srl	97	82.198	Anabas_testudineus
ENSCLAG00000016242	SRL	100	85.861	ENSACAG00000016380	SRL	85	89.009	Anolis_carolinensis
ENSCLAG00000016242	SRL	94	72.967	ENSACLG00000024674	SRL	57	71.868	Astatotilapia_calliptera
ENSCLAG00000016242	SRL	98	81.720	ENSACLG00000027685	srl	98	82.667	Astatotilapia_calliptera
ENSCLAG00000016242	SRL	88	78.313	ENSAMXG00000038693	SRL	100	73.951	Astyanax_mexicanus
ENSCLAG00000016242	SRL	99	79.618	ENSAMXG00000018789	srl	86	83.220	Astyanax_mexicanus
ENSCLAG00000016242	SRL	96	96.909	ENSBTAG00000001078	SRL	57	96.909	Bos_taurus
ENSCLAG00000016242	SRL	94	97.291	ENSCJAG00000019750	SRL	97	96.499	Callithrix_jacchus
ENSCLAG00000016242	SRL	97	96.739	ENSCAFG00000019233	SRL	84	97.566	Canis_familiaris
ENSCLAG00000016242	SRL	96	97.143	ENSCAFG00020025024	SRL	56	97.143	Canis_lupus_dingo
ENSCLAG00000016242	SRL	99	95.699	ENSCHIG00000017927	SRL	57	96.909	Capra_hircus
ENSCLAG00000016242	SRL	100	97.040	ENSTSYG00000007919	SRL	100	98.144	Carlito_syrichta
ENSCLAG00000016242	SRL	100	99.153	ENSCPOG00000012643	SRL	100	99.153	Cavia_porcellus
ENSCLAG00000016242	SRL	94	90.971	ENSCCAG00000032646	SRL	100	97.889	Cebus_capucinus
ENSCLAG00000016242	SRL	100	96.406	ENSCATG00000032227	-	100	96.406	Cercocebus_atys
ENSCLAG00000016242	SRL	82	97.143	ENSCHOG00000001618	SRL	52	97.143	Choloepus_hoffmanni
ENSCLAG00000016242	SRL	96	94.041	ENSCPBG00000026371	SRL	95	89.849	Chrysemys_picta_bellii
ENSCLAG00000016242	SRL	88	60.671	ENSCING00000005231	-	91	61.084	Ciona_intestinalis
ENSCLAG00000016242	SRL	100	96.406	ENSCANG00000035872	SRL	100	97.680	Colobus_angolensis_palliatus
ENSCLAG00000016242	SRL	100	97.881	ENSCGRG00001016630	Srl	100	97.881	Cricetulus_griseus_chok1gshd
ENSCLAG00000016242	SRL	100	97.881	ENSCGRG00000005458	Srl	100	97.881	Cricetulus_griseus_crigri
ENSCLAG00000016242	SRL	100	81.356	ENSCSEG00000016151	srl	97	82.379	Cynoglossus_semilaevis
ENSCLAG00000016242	SRL	99	70.253	ENSCSEG00000011866	SRL	92	71.711	Cynoglossus_semilaevis
ENSCLAG00000016242	SRL	94	75.000	ENSCVAG00000022465	SRL	60	74.115	Cyprinodon_variegatus
ENSCLAG00000016242	SRL	100	80.508	ENSCVAG00000003513	srl	96	83.258	Cyprinodon_variegatus
ENSCLAG00000016242	SRL	80	77.083	ENSDARG00000112959	CABZ01072309.1	100	77.083	Danio_rerio
ENSCLAG00000016242	SRL	100	81.780	ENSDARG00000104587	srl	96	83.556	Danio_rerio
ENSCLAG00000016242	SRL	96	96.696	ENSDNOG00000011643	SRL	54	96.696	Dasypus_novemcinctus
ENSCLAG00000016242	SRL	100	97.034	ENSDORG00000014807	Srl	100	97.034	Dipodomys_ordii
ENSCLAG00000016242	SRL	78	65.241	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSCLAG00000016242	SRL	96	96.468	ENSEASG00005000942	SRL	55	96.468	Equus_asinus_asinus
ENSCLAG00000016242	SRL	99	95.975	ENSECAG00000024219	SRL	96	96.484	Equus_caballus
ENSCLAG00000016242	SRL	100	77.823	ENSELUG00000015616	srl	97	78.936	Esox_lucius
ENSCLAG00000016242	SRL	100	96.406	ENSFCAG00000022075	SRL	100	96.406	Felis_catus
ENSCLAG00000016242	SRL	96	90.508	ENSFALG00000004328	SRL	64	90.909	Ficedula_albicollis
ENSCLAG00000016242	SRL	100	98.305	ENSFDAG00000006199	SRL	100	98.305	Fukomys_damarensis
ENSCLAG00000016242	SRL	100	70.697	ENSFHEG00000011854	SRL	98	76.471	Fundulus_heteroclitus
ENSCLAG00000016242	SRL	100	80.085	ENSFHEG00000011239	srl	97	81.498	Fundulus_heteroclitus
ENSCLAG00000016242	SRL	93	80.574	ENSGMOG00000014954	srl	99	80.574	Gadus_morhua
ENSCLAG00000016242	SRL	99	89.384	ENSGALG00000038884	SRL	96	90.308	Gallus_gallus
ENSCLAG00000016242	SRL	94	76.471	ENSGAFG00000016984	SRL	98	76.471	Gambusia_affinis
ENSCLAG00000016242	SRL	100	80.085	ENSGAFG00000000010	srl	97	82.697	Gambusia_affinis
ENSCLAG00000016242	SRL	93	81.236	ENSGACG00000011332	srl	99	81.236	Gasterosteus_aculeatus
ENSCLAG00000016242	SRL	100	95.983	ENSGGOG00000011312	-	97	96.937	Gorilla_gorilla
ENSCLAG00000016242	SRL	94	72.747	ENSHBUG00000015710	SRL	57	72.747	Haplochromis_burtoni
ENSCLAG00000016242	SRL	98	81.720	ENSHBUG00000007581	srl	98	82.667	Haplochromis_burtoni
ENSCLAG00000016242	SRL	100	98.729	ENSHGLG00000015271	SRL	100	98.729	Heterocephalus_glaber_female
ENSCLAG00000016242	SRL	100	98.729	ENSHGLG00100019378	SRL	100	98.729	Heterocephalus_glaber_male
ENSCLAG00000016242	SRL	99	80.213	ENSHCOG00000008687	srl	98	83.258	Hippocampus_comes
ENSCLAG00000016242	SRL	94	72.848	ENSHCOG00000001012	SRL	50	71.744	Hippocampus_comes
ENSCLAG00000016242	SRL	92	70.413	ENSIPUG00000011609	SRL	95	69.266	Ictalurus_punctatus
ENSCLAG00000016242	SRL	100	79.025	ENSIPUG00000012513	srl	96	80.574	Ictalurus_punctatus
ENSCLAG00000016242	SRL	100	97.881	ENSSTOG00000021151	-	100	97.881	Ictidomys_tridecemlineatus
ENSCLAG00000016242	SRL	100	97.458	ENSJJAG00000016400	Srl	100	97.458	Jaculus_jaculus
ENSCLAG00000016242	SRL	93	76.644	ENSKMAG00000019537	SRL	100	76.644	Kryptolebias_marmoratus
ENSCLAG00000016242	SRL	98	81.385	ENSKMAG00000014115	srl	93	85.986	Kryptolebias_marmoratus
ENSCLAG00000016242	SRL	96	74.561	ENSLBEG00000013811	SRL	98	74.342	Labrus_bergylta
ENSCLAG00000016242	SRL	100	80.720	ENSLBEG00000026643	srl	96	81.758	Labrus_bergylta
ENSCLAG00000016242	SRL	96	85.841	ENSLACG00000002825	SRL	99	85.841	Latimeria_chalumnae
ENSCLAG00000016242	SRL	99	82.303	ENSLOCG00000002644	srl	96	84.071	Lepisosteus_oculatus
ENSCLAG00000016242	SRL	96	96.681	ENSLAFG00000006329	SRL	51	96.681	Loxodonta_africana
ENSCLAG00000016242	SRL	91	97.680	ENSMFAG00000037383	SRL	100	97.680	Macaca_fascicularis
ENSCLAG00000016242	SRL	98	95.879	ENSMNEG00000019236	-	97	95.879	Macaca_nemestrina
ENSCLAG00000016242	SRL	100	88.584	ENSMLEG00000032156	SRL	96	88.840	Mandrillus_leucophaeus
ENSCLAG00000016242	SRL	99	80.000	ENSMAMG00000023322	srl	94	83.937	Mastacembelus_armatus
ENSCLAG00000016242	SRL	93	74.009	ENSMAMG00000013756	SRL	53	73.904	Mastacembelus_armatus
ENSCLAG00000016242	SRL	98	81.720	ENSMZEG00005004548	srl	98	82.667	Maylandia_zebra
ENSCLAG00000016242	SRL	94	72.967	ENSMZEG00005004010	SRL	57	71.868	Maylandia_zebra
ENSCLAG00000016242	SRL	96	91.131	ENSMGAG00000009342	SRL	95	92.819	Meleagris_gallopavo
ENSCLAG00000016242	SRL	96	96.053	ENSMICG00000032307	SRL	97	96.061	Microcebus_murinus
ENSCLAG00000016242	SRL	100	97.034	ENSMOCG00000008208	Srl	100	97.034	Microtus_ochrogaster
ENSCLAG00000016242	SRL	94	83.710	ENSMMOG00000013970	srl	98	83.710	Mola_mola
ENSCLAG00000016242	SRL	93	72.747	ENSMMOG00000021572	SRL	99	72.747	Mola_mola
ENSCLAG00000016242	SRL	96	96.689	ENSMODG00000016380	-	51	96.689	Monodelphis_domestica
ENSCLAG00000016242	SRL	100	81.184	ENSMALG00000005039	srl	98	83.484	Monopterus_albus
ENSCLAG00000016242	SRL	89	76.134	ENSMALG00000000670	SRL	98	75.179	Monopterus_albus
ENSCLAG00000016242	SRL	100	97.246	MGP_CAROLIEiJ_G0020400	Srl	100	97.246	Mus_caroli
ENSCLAG00000016242	SRL	100	97.246	ENSMUSG00000022519	Srl	100	97.246	Mus_musculus
ENSCLAG00000016242	SRL	100	97.246	MGP_SPRETEiJ_G0021294	Srl	100	97.246	Mus_spretus
ENSCLAG00000016242	SRL	96	97.566	ENSMPUG00000015025	SRL	55	97.566	Mustela_putorius_furo
ENSCLAG00000016242	SRL	98	95.445	ENSMLUG00000030733	SRL	58	95.445	Myotis_lucifugus
ENSCLAG00000016242	SRL	100	97.246	ENSNGAG00000019741	Srl	100	97.246	Nannospalax_galili
ENSCLAG00000016242	SRL	98	81.720	ENSNBRG00000023775	srl	96	82.522	Neolamprologus_brichardi
ENSCLAG00000016242	SRL	94	72.967	ENSNBRG00000002422	SRL	62	68.421	Neolamprologus_brichardi
ENSCLAG00000016242	SRL	100	89.641	ENSNLEG00000029051	SRL	96	90.153	Nomascus_leucogenys
ENSCLAG00000016242	SRL	97	90.000	ENSOPRG00000000477	-	53	90.749	Ochotona_princeps
ENSCLAG00000016242	SRL	100	98.517	ENSODEG00000013256	SRL	100	98.517	Octodon_degus
ENSCLAG00000016242	SRL	97	82.135	ENSONIG00000005192	srl	96	82.743	Oreochromis_niloticus
ENSCLAG00000016242	SRL	97	96.739	ENSOCUG00000025140	SRL	51	96.739	Oryctolagus_cuniculus
ENSCLAG00000016242	SRL	96	74.501	ENSORLG00000015064	SRL	98	74.501	Oryzias_latipes
ENSCLAG00000016242	SRL	100	79.661	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSCLAG00000016242	SRL	96	74.723	ENSORLG00020018173	SRL	98	74.723	Oryzias_latipes_hni
ENSCLAG00000016242	SRL	100	79.873	ENSORLG00020019784	srl	79	85.052	Oryzias_latipes_hni
ENSCLAG00000016242	SRL	96	74.945	ENSORLG00015019063	SRL	98	74.945	Oryzias_latipes_hsok
ENSCLAG00000016242	SRL	100	79.449	ENSORLG00015009342	srl	93	80.837	Oryzias_latipes_hsok
ENSCLAG00000016242	SRL	94	73.085	ENSOMEG00000005682	SRL	53	73.085	Oryzias_melastigma
ENSCLAG00000016242	SRL	100	80.085	ENSOMEG00000010006	srl	98	83.182	Oryzias_melastigma
ENSCLAG00000016242	SRL	96	96.256	ENSOGAG00000029266	SRL	55	96.256	Otolemur_garnettii
ENSCLAG00000016242	SRL	99	95.699	ENSOARG00000003074	SRL	57	97.118	Ovis_aries
ENSCLAG00000016242	SRL	100	96.195	ENSPPAG00000024919	-	100	97.680	Pan_paniscus
ENSCLAG00000016242	SRL	100	96.617	ENSPPRG00000010274	SRL	100	97.912	Panthera_pardus
ENSCLAG00000016242	SRL	100	96.617	ENSPTIG00000015162	SRL	100	97.912	Panthera_tigris_altaica
ENSCLAG00000016242	SRL	100	96.195	ENSPTRG00000007712	SRL	100	97.680	Pan_troglodytes
ENSCLAG00000016242	SRL	98	96.095	ENSPANG00000013804	SRL	99	96.095	Papio_anubis
ENSCLAG00000016242	SRL	100	73.729	ENSPKIG00000024974	SRL	88	76.244	Paramormyrops_kingsleyae
ENSCLAG00000016242	SRL	100	80.338	ENSPKIG00000006405	srl	93	83.710	Paramormyrops_kingsleyae
ENSCLAG00000016242	SRL	96	90.969	ENSPSIG00000008586	SRL	51	90.969	Pelodiscus_sinensis
ENSCLAG00000016242	SRL	96	82.561	ENSPMGG00000021081	srl	97	82.561	Periophthalmus_magnuspinnatus
ENSCLAG00000016242	SRL	94	73.303	ENSPMGG00000023505	-	99	72.584	Periophthalmus_magnuspinnatus
ENSCLAG00000016242	SRL	100	97.458	ENSPEMG00000015842	Srl	100	97.458	Peromyscus_maniculatus_bairdii
ENSCLAG00000016242	SRL	89	68.119	ENSPMAG00000004786	srl	99	67.890	Petromyzon_marinus
ENSCLAG00000016242	SRL	96	96.452	ENSPCIG00000012128	SRL	98	96.452	Phascolarctos_cinereus
ENSCLAG00000016242	SRL	100	78.512	ENSPFOG00000011408	srl	94	81.140	Poecilia_formosa
ENSCLAG00000016242	SRL	97	81.264	ENSPLAG00000008017	srl	97	82.921	Poecilia_latipinna
ENSCLAG00000016242	SRL	94	76.018	ENSPLAG00000002932	SRL	98	74.887	Poecilia_latipinna
ENSCLAG00000016242	SRL	94	73.742	ENSPMEG00000005890	SRL	59	72.967	Poecilia_mexicana
ENSCLAG00000016242	SRL	100	80.297	ENSPMEG00000006745	srl	97	82.921	Poecilia_mexicana
ENSCLAG00000016242	SRL	94	77.149	ENSPREG00000000315	SRL	98	76.018	Poecilia_reticulata
ENSCLAG00000016242	SRL	100	79.873	ENSPREG00000007751	srl	99	82.697	Poecilia_reticulata
ENSCLAG00000016242	SRL	89	98.329	ENSPPYG00000007053	SRL	98	98.329	Pongo_abelii
ENSCLAG00000016242	SRL	96	95.143	ENSPCAG00000003378	-	51	95.143	Procavia_capensis
ENSCLAG00000016242	SRL	97	96.507	ENSPCOG00000023135	SRL	100	97.448	Propithecus_coquereli
ENSCLAG00000016242	SRL	96	97.345	ENSPVAG00000006586	SRL	56	97.345	Pteropus_vampyrus
ENSCLAG00000016242	SRL	94	72.967	ENSPNYG00000003423	SRL	57	71.868	Pundamilia_nyererei
ENSCLAG00000016242	SRL	98	81.720	ENSPNYG00000001200	srl	98	82.667	Pundamilia_nyererei
ENSCLAG00000016242	SRL	100	78.390	ENSPNAG00000023106	srl	94	81.674	Pygocentrus_nattereri
ENSCLAG00000016242	SRL	97	74.459	ENSPNAG00000007361	-	93	74.670	Pygocentrus_nattereri
ENSCLAG00000016242	SRL	97	97.162	ENSRNOG00000005269	Srl	51	97.162	Rattus_norvegicus
ENSCLAG00000016242	SRL	97	95.870	ENSRBIG00000042358	SRL	51	96.491	Rhinopithecus_bieti
ENSCLAG00000016242	SRL	94	97.291	ENSSBOG00000029273	SRL	97	96.499	Saimiri_boliviensis_boliviensis
ENSCLAG00000016242	SRL	97	96.053	ENSSHAG00000011715	-	51	96.053	Sarcophilus_harrisii
ENSCLAG00000016242	SRL	100	79.132	ENSSFOG00015009773	srl	97	83.480	Scleropages_formosus
ENSCLAG00000016242	SRL	94	76.471	ENSSFOG00015021327	SRL	51	74.891	Scleropages_formosus
ENSCLAG00000016242	SRL	100	80.338	ENSSMAG00000016274	srl	99	81.798	Scophthalmus_maximus
ENSCLAG00000016242	SRL	93	73.085	ENSSMAG00000002232	SRL	50	71.868	Scophthalmus_maximus
ENSCLAG00000016242	SRL	94	83.937	ENSSDUG00000010808	srl	97	83.937	Seriola_dumerili
ENSCLAG00000016242	SRL	94	74.833	ENSSDUG00000009161	SRL	98	74.833	Seriola_dumerili
ENSCLAG00000016242	SRL	94	74.398	ENSSLDG00000014601	SRL	99	74.505	Seriola_lalandi_dorsalis
ENSCLAG00000016242	SRL	96	82.781	ENSSLDG00000022024	srl	95	83.937	Seriola_lalandi_dorsalis
ENSCLAG00000016242	SRL	96	90.265	ENSSPUG00000016859	SRL	99	90.265	Sphenodon_punctatus
ENSCLAG00000016242	SRL	93	75.964	ENSSPAG00000014254	SRL	98	74.830	Stegastes_partitus
ENSCLAG00000016242	SRL	100	81.144	ENSSPAG00000019105	srl	96	82.781	Stegastes_partitus
ENSCLAG00000016242	SRL	96	96.689	ENSSSCG00000007949	SRL	99	97.098	Sus_scrofa
ENSCLAG00000016242	SRL	77	92.541	ENSTGUG00000016121	-	96	93.391	Taeniopygia_guttata
ENSCLAG00000016242	SRL	96	90.110	ENSTGUG00000003951	-	99	90.110	Taeniopygia_guttata
ENSCLAG00000016242	SRL	89	75.418	ENSTRUG00000013310	SRL	55	75.418	Takifugu_rubripes
ENSCLAG00000016242	SRL	100	81.144	ENSTRUG00000006005	srl	97	82.159	Takifugu_rubripes
ENSCLAG00000016242	SRL	96	81.938	ENSTNIG00000009739	srl	97	81.938	Tetraodon_nigroviridis
ENSCLAG00000016242	SRL	96	98.009	ENSUAMG00000005701	SRL	56	98.009	Ursus_americanus
ENSCLAG00000016242	SRL	96	97.788	ENSUMAG00000002574	SRL	56	97.788	Ursus_maritimus
ENSCLAG00000016242	SRL	96	97.357	ENSVVUG00000016331	-	50	97.357	Vulpes_vulpes
ENSCLAG00000016242	SRL	96	88.717	ENSXETG00000017313	srl	100	88.717	Xenopus_tropicalis
ENSCLAG00000016242	SRL	96	75.166	ENSXCOG00000014584	SRL	100	75.166	Xiphophorus_couchianus
ENSCLAG00000016242	SRL	89	85.036	ENSXCOG00000010424	srl	97	85.036	Xiphophorus_couchianus
ENSCLAG00000016242	SRL	100	80.085	ENSXMAG00000004625	srl	92	81.718	Xiphophorus_maculatus
ENSCLAG00000016242	SRL	94	74.066	ENSXMAG00000027598	SRL	62	73.626	Xiphophorus_maculatus