EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016269 (Gene tree)
Gene ID: 102019061
Gene Symbol: -
Alias: DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 124752 bases
Position: chrJH721876.1:21085570-21210321
Accession: 102019061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000023710	ResIII	PF04851.15	5.1e-08	1	1
ENSCLAP00000023711	ResIII	PF04851.15	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000023938	-	360	-	ENSCLAP00000023712	120 (aa)	-	-
ENSCLAT00000023937	-	5487	-	ENSCLAP00000023711	1828 (aa)	-	UPI00038F007C
ENSCLAT00000023936	-	9062	XM_005381599	ENSCLAP00000023710	1828 (aa)	XP_005381656	UPI00038F007C

Gene Model

Click here to download ENSCLAG00000016269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016269	-	52	34.874	ENSCLAG00000007137	CHD9	75	39.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016269	-	100	97.538	ENSG00000173575	CHD2	100	98.246	Homo_sapiens
ENSCLAG00000016269	-	96	72.188	ENSAPOG00000008913	chd2	100	71.444	Acanthochromis_polyacanthus
ENSCLAG00000016269	-	63	97.743	ENSAMEG00000010805	-	100	97.743	Ailuropoda_melanoleuca
ENSCLAG00000016269	-	96	69.916	ENSAOCG00000016332	chd2	100	69.086	Amphiprion_ocellaris
ENSCLAG00000016269	-	96	72.213	ENSAPEG00000016676	chd2	100	71.297	Amphiprion_percula
ENSCLAG00000016269	-	96	71.801	ENSATEG00000005246	chd2	100	71.030	Anabas_testudineus
ENSCLAG00000016269	-	100	87.127	ENSAPLG00000011141	-	100	86.475	Anas_platyrhynchos
ENSCLAG00000016269	-	98	80.462	ENSACAG00000000088	-	99	80.033	Anolis_carolinensis
ENSCLAG00000016269	-	100	97.484	ENSANAG00000024017	-	100	97.484	Aotus_nancymaae
ENSCLAG00000016269	-	100	97.265	ENSCJAG00000020444	-	100	97.265	Callithrix_jacchus
ENSCLAG00000016269	-	99	97.456	ENSCAFG00000010998	CHD2	100	97.462	Canis_familiaris
ENSCLAG00000016269	-	99	94.673	ENSCHIG00000022261	-	99	94.673	Capra_hircus
ENSCLAG00000016269	-	100	97.648	ENSTSYG00000003272	-	100	97.648	Carlito_syrichta
ENSCLAG00000016269	-	93	98.596	ENSCPOG00000005800	-	100	98.596	Cavia_porcellus
ENSCLAG00000016269	-	100	97.484	ENSCCAG00000035304	-	100	97.484	Cebus_capucinus
ENSCLAG00000016269	-	100	97.538	ENSCATG00000031069	-	100	97.538	Cercocebus_atys
ENSCLAG00000016269	-	100	97.593	ENSCSAG00000017007	-	100	97.593	Chlorocebus_sabaeus
ENSCLAG00000016269	-	78	98.182	ENSCHOG00000000608	-	81	98.182	Choloepus_hoffmanni
ENSCLAG00000016269	-	73	95.745	ENSCPBG00000018049	-	97	95.745	Chrysemys_picta_bellii
ENSCLAG00000016269	-	74	54.342	ENSCSAVG00000007580	-	93	60.314	Ciona_savignyi
ENSCLAG00000016269	-	100	97.484	ENSCANG00000038126	-	100	97.484	Colobus_angolensis_palliatus
ENSCLAG00000016269	-	100	96.116	ENSCGRG00001006649	Chd2	100	96.116	Cricetulus_griseus_chok1gshd
ENSCLAG00000016269	-	100	96.116	ENSCGRG00000018154	Chd2	100	96.116	Cricetulus_griseus_crigri
ENSCLAG00000016269	-	93	66.215	ENSCSEG00000003646	chd2	94	65.581	Cynoglossus_semilaevis
ENSCLAG00000016269	-	100	63.412	ENSCVAG00000002427	chd2	100	62.359	Cyprinodon_variegatus
ENSCLAG00000016269	-	96	69.978	ENSDARG00000060687	chd2	100	71.486	Danio_rerio
ENSCLAG00000016269	-	99	96.663	ENSDNOG00000009796	-	100	96.663	Dasypus_novemcinctus
ENSCLAG00000016269	-	50	74.468	ENSEBUG00000014994	chd2	83	74.468	Eptatretus_burgeri
ENSCLAG00000016269	-	99	97.456	ENSEASG00005015526	-	99	97.938	Equus_asinus_asinus
ENSCLAG00000016269	-	95	71.808	ENSELUG00000017981	chd2	100	70.885	Esox_lucius
ENSCLAG00000016269	-	100	88.526	ENSFALG00000010369	-	100	88.309	Ficedula_albicollis
ENSCLAG00000016269	-	100	98.304	ENSFDAG00000020651	-	100	98.304	Fukomys_damarensis
ENSCLAG00000016269	-	88	71.262	ENSFHEG00000002119	chd2	97	71.508	Fundulus_heteroclitus
ENSCLAG00000016269	-	94	68.995	ENSGMOG00000002890	chd2	99	70.208	Gadus_morhua
ENSCLAG00000016269	-	100	87.466	ENSGALG00000006949	CHD2	100	86.761	Gallus_gallus
ENSCLAG00000016269	-	99	68.952	ENSGAFG00000001905	chd2	98	69.151	Gambusia_affinis
ENSCLAG00000016269	-	91	70.634	ENSGACG00000013246	chd2	99	69.926	Gasterosteus_aculeatus
ENSCLAG00000016269	-	79	89.671	ENSGAGG00000013176	-	95	96.629	Gopherus_agassizii
ENSCLAG00000016269	-	100	96.007	ENSGGOG00000015677	CHD2	100	96.007	Gorilla_gorilla
ENSCLAG00000016269	-	96	72.391	ENSHBUG00000017947	chd2	100	71.329	Haplochromis_burtoni
ENSCLAG00000016269	-	100	98.085	ENSHGLG00000004435	CHD2	100	98.085	Heterocephalus_glaber_female
ENSCLAG00000016269	-	100	97.429	ENSHGLG00100016376	-	100	97.429	Heterocephalus_glaber_male
ENSCLAG00000016269	-	71	74.281	ENSIPUG00000000488	chd2	100	68.534	Ictalurus_punctatus
ENSCLAG00000016269	-	100	97.593	ENSSTOG00000001270	-	100	97.593	Ictidomys_tridecemlineatus
ENSCLAG00000016269	-	100	96.171	ENSJJAG00000000213	Chd2	100	96.171	Jaculus_jaculus
ENSCLAG00000016269	-	84	72.463	ENSKMAG00000015849	chd2	99	73.497	Kryptolebias_marmoratus
ENSCLAG00000016269	-	75	96.809	ENSLAFG00000016885	-	100	96.809	Loxodonta_africana
ENSCLAG00000016269	-	100	97.538	ENSMFAG00000033343	-	100	97.538	Macaca_fascicularis
ENSCLAG00000016269	-	100	97.538	ENSMMUG00000011782	-	100	97.538	Macaca_mulatta
ENSCLAG00000016269	-	100	97.158	ENSMNEG00000036875	-	100	97.158	Macaca_nemestrina
ENSCLAG00000016269	-	100	97.593	ENSMLEG00000035026	-	100	97.593	Mandrillus_leucophaeus
ENSCLAG00000016269	-	96	71.915	ENSMAMG00000009082	chd2	100	70.461	Mastacembelus_armatus
ENSCLAG00000016269	-	99	87.493	ENSMGAG00000008966	-	100	86.780	Meleagris_gallopavo
ENSCLAG00000016269	-	100	96.280	ENSMICG00000000332	-	100	96.280	Microcebus_murinus
ENSCLAG00000016269	-	100	96.063	ENSMOCG00000015124	Chd2	100	96.063	Microtus_ochrogaster
ENSCLAG00000016269	-	100	91.785	ENSMODG00000013158	-	100	91.893	Monodelphis_domestica
ENSCLAG00000016269	-	100	95.733	MGP_CAROLIEiJ_G0029860	Chd2	100	95.733	Mus_caroli
ENSCLAG00000016269	-	100	95.460	ENSMUSG00000078671	Chd2	100	95.460	Mus_musculus
ENSCLAG00000016269	-	100	95.899	MGP_PahariEiJ_G0013082	Chd2	100	95.899	Mus_pahari
ENSCLAG00000016269	-	100	95.569	MGP_SPRETEiJ_G0030962	Chd2	100	95.569	Mus_spretus
ENSCLAG00000016269	-	100	97.429	ENSMPUG00000017577	-	100	97.429	Mustela_putorius_furo
ENSCLAG00000016269	-	100	94.680	ENSMLUG00000009292	-	100	94.680	Myotis_lucifugus
ENSCLAG00000016269	-	100	96.882	ENSNGAG00000010792	Chd2	100	96.882	Nannospalax_galili
ENSCLAG00000016269	-	100	94.967	ENSNLEG00000012349	-	100	94.748	Nomascus_leucogenys
ENSCLAG00000016269	-	71	88.962	ENSMEUG00000001522	-	77	89.093	Notamacropus_eugenii
ENSCLAG00000016269	-	100	98.140	ENSODEG00000016028	-	100	98.140	Octodon_degus
ENSCLAG00000016269	-	96	72.278	ENSONIG00000015136	chd2	100	71.352	Oreochromis_niloticus
ENSCLAG00000016269	-	88	82.415	ENSOANG00000004385	-	100	82.291	Ornithorhynchus_anatinus
ENSCLAG00000016269	-	100	86.088	ENSOCUG00000001628	-	99	96.602	Oryctolagus_cuniculus
ENSCLAG00000016269	-	96	71.573	ENSORLG00000008403	chd2	100	70.516	Oryzias_latipes
ENSCLAG00000016269	-	96	71.822	ENSORLG00020004138	chd2	100	70.753	Oryzias_latipes_hni
ENSCLAG00000016269	-	100	64.052	ENSOMEG00000005831	chd2	100	64.263	Oryzias_melastigma
ENSCLAG00000016269	-	100	95.241	ENSOGAG00000010399	-	100	95.241	Otolemur_garnettii
ENSCLAG00000016269	-	99	96.302	ENSOARG00000010343	-	100	95.022	Ovis_aries
ENSCLAG00000016269	-	100	96.614	ENSPPAG00000030381	-	100	96.614	Pan_paniscus
ENSCLAG00000016269	-	100	97.593	ENSPTRG00000007478	CHD2	100	97.593	Pan_troglodytes
ENSCLAG00000016269	-	100	94.639	ENSPANG00000033355	-	100	94.639	Papio_anubis
ENSCLAG00000016269	-	99	69.868	ENSPKIG00000000495	chd2	100	71.336	Paramormyrops_kingsleyae
ENSCLAG00000016269	-	84	70.166	ENSPMGG00000009941	chd2	99	70.724	Periophthalmus_magnuspinnatus
ENSCLAG00000016269	-	100	96.061	ENSPEMG00000019507	Chd2	100	96.061	Peromyscus_maniculatus_bairdii
ENSCLAG00000016269	-	91	92.699	ENSPCIG00000009417	-	100	91.895	Phascolarctos_cinereus
ENSCLAG00000016269	-	96	72.443	ENSPFOG00000007050	chd2	100	71.436	Poecilia_formosa
ENSCLAG00000016269	-	96	72.722	ENSPLAG00000005067	chd2	100	71.521	Poecilia_latipinna
ENSCLAG00000016269	-	96	72.387	ENSPMEG00000019628	chd2	100	71.382	Poecilia_mexicana
ENSCLAG00000016269	-	100	96.280	ENSPPYG00000006799	-	100	96.280	Pongo_abelii
ENSCLAG00000016269	-	100	98.085	ENSPCOG00000028084	-	100	98.085	Propithecus_coquereli
ENSCLAG00000016269	-	68	73.600	ENSPNAG00000016719	chd2	99	69.244	Pygocentrus_nattereri
ENSCLAG00000016269	-	100	95.569	ENSRNOG00000012716	Chd2	100	95.569	Rattus_norvegicus
ENSCLAG00000016269	-	100	95.353	ENSRBIG00000036875	-	100	95.353	Rhinopithecus_bieti
ENSCLAG00000016269	-	100	97.374	ENSRROG00000041087	-	100	97.374	Rhinopithecus_roxellana
ENSCLAG00000016269	-	100	97.648	ENSSBOG00000023754	-	100	97.648	Saimiri_boliviensis_boliviensis
ENSCLAG00000016269	-	100	91.839	ENSSHAG00000012513	-	100	92.002	Sarcophilus_harrisii
ENSCLAG00000016269	-	100	72.845	ENSSFOG00015023759	chd2	100	72.806	Scleropages_formosus
ENSCLAG00000016269	-	96	70.964	ENSSMAG00000001726	chd2	100	69.861	Scophthalmus_maximus
ENSCLAG00000016269	-	77	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSCLAG00000016269	-	99	83.462	ENSSPUG00000011266	-	99	83.462	Sphenodon_punctatus
ENSCLAG00000016269	-	100	97.702	ENSSSCG00000002266	-	100	97.913	Sus_scrofa
ENSCLAG00000016269	-	100	88.222	ENSTGUG00000008540	-	100	88.113	Taeniopygia_guttata
ENSCLAG00000016269	-	80	69.884	ENSTRUG00000008842	chd2	87	68.312	Takifugu_rubripes
ENSCLAG00000016269	-	86	72.876	ENSTNIG00000010760	chd2	98	72.355	Tetraodon_nigroviridis
ENSCLAG00000016269	-	71	97.357	ENSTBEG00000017730	-	83	97.357	Tupaia_belangeri
ENSCLAG00000016269	-	95	97.273	ENSTTRG00000000430	-	90	97.273	Tursiops_truncatus
ENSCLAG00000016269	-	100	94.912	ENSUMAG00000000083	-	100	94.912	Ursus_maritimus
ENSCLAG00000016269	-	83	98.556	ENSVPAG00000009645	-	86	98.556	Vicugna_pacos
ENSCLAG00000016269	-	89	73.612	ENSXETG00000024129	chd2	72	81.250	Xenopus_tropicalis
ENSCLAG00000016269	-	98	69.235	ENSXCOG00000020255	chd2	100	68.952	Xiphophorus_couchianus
ENSCLAG00000016269	-	99	70.833	ENSXMAG00000002707	chd2	100	71.452	Xiphophorus_maculatus