EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000016298 (Gene tree)
Gene ID: 102007011
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 90535 bases
Position: chrJH721939.1:9740805-9831339
Accession: 102007011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000023753	Xpo1	PF08389.12	1.9e-28	1	1
ENSCLAP00000023751	Xpo1	PF08389.12	5.8e-18	1	1
ENSCLAP00000023752	Xpo1	PF08389.12	5.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000023977	TNPO3-201	5113	-	ENSCLAP00000023751	885 (aa)	-	-
ENSCLAT00000023979	TNPO3-203	2784	XM_005402403	ENSCLAP00000023753	927 (aa)	XP_005402460	-
ENSCLAT00000023978	TNPO3-202	3355	-	ENSCLAP00000023752	885 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000016298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016298	TNPO3	100	98.706	ENSG00000064419	TNPO3	100	98.706	Homo_sapiens
ENSCLAG00000016298	TNPO3	100	85.437	ENSAPOG00000018347	tnpo3	100	85.437	Acanthochromis_polyacanthus
ENSCLAG00000016298	TNPO3	99	95.293	ENSAMEG00000005135	TNPO3	98	95.293	Ailuropoda_melanoleuca
ENSCLAG00000016298	TNPO3	96	83.352	ENSACIG00000005897	tnpo3	99	83.352	Amphilophus_citrinellus
ENSCLAG00000016298	TNPO3	100	85.545	ENSAOCG00000008264	tnpo3	100	85.545	Amphiprion_ocellaris
ENSCLAG00000016298	TNPO3	96	85.457	ENSAPEG00000024300	tnpo3	100	85.457	Amphiprion_percula
ENSCLAG00000016298	TNPO3	100	84.466	ENSATEG00000003197	tnpo3	100	84.466	Anabas_testudineus
ENSCLAG00000016298	TNPO3	72	92.453	ENSAPLG00000005946	TNPO3	91	92.453	Anas_platyrhynchos
ENSCLAG00000016298	TNPO3	83	91.634	ENSACAG00000013470	TNPO3	95	91.634	Anolis_carolinensis
ENSCLAG00000016298	TNPO3	100	98.490	ENSANAG00000037940	TNPO3	100	98.490	Aotus_nancymaae
ENSCLAG00000016298	TNPO3	100	84.790	ENSACLG00000005561	tnpo3	100	84.790	Astatotilapia_calliptera
ENSCLAG00000016298	TNPO3	100	85.329	ENSAMXG00000016236	tnpo3	100	85.329	Astyanax_mexicanus
ENSCLAG00000016298	TNPO3	100	98.058	ENSBTAG00000004992	TNPO3	100	98.058	Bos_taurus
ENSCLAG00000016298	TNPO3	100	98.490	ENSCJAG00000018085	TNPO3	100	98.490	Callithrix_jacchus
ENSCLAG00000016298	TNPO3	100	98.813	ENSCAFG00000001543	TNPO3	100	98.813	Canis_familiaris
ENSCLAG00000016298	TNPO3	100	98.813	ENSCAFG00020022462	TNPO3	99	98.385	Canis_lupus_dingo
ENSCLAG00000016298	TNPO3	100	98.058	ENSCHIG00000011721	TNPO3	100	98.058	Capra_hircus
ENSCLAG00000016298	TNPO3	100	98.598	ENSTSYG00000002989	TNPO3	100	98.598	Carlito_syrichta
ENSCLAG00000016298	TNPO3	71	97.849	ENSCAPG00000005843	TNPO3	91	97.849	Cavia_aperea
ENSCLAG00000016298	TNPO3	100	98.382	ENSCPOG00000039784	TNPO3	100	98.382	Cavia_porcellus
ENSCLAG00000016298	TNPO3	100	98.598	ENSCCAG00000033826	TNPO3	100	98.598	Cebus_capucinus
ENSCLAG00000016298	TNPO3	100	98.706	ENSCATG00000030018	TNPO3	100	98.706	Cercocebus_atys
ENSCLAG00000016298	TNPO3	100	98.598	ENSCSAG00000009966	TNPO3	100	98.598	Chlorocebus_sabaeus
ENSCLAG00000016298	TNPO3	99	70.157	ENSCHOG00000011547	TNPO3	99	70.157	Choloepus_hoffmanni
ENSCLAG00000016298	TNPO3	93	93.612	ENSCPBG00000017497	TNPO3	100	93.612	Chrysemys_picta_bellii
ENSCLAG00000016298	TNPO3	99	48.265	ENSCING00000005042	-	99	48.265	Ciona_intestinalis
ENSCLAG00000016298	TNPO3	99	46.688	ENSCSAVG00000008623	-	94	54.182	Ciona_savignyi
ENSCLAG00000016298	TNPO3	100	98.706	ENSCANG00000033070	TNPO3	100	98.706	Colobus_angolensis_palliatus
ENSCLAG00000016298	TNPO3	100	98.382	ENSCGRG00001015925	Tnpo3	100	98.382	Cricetulus_griseus_chok1gshd
ENSCLAG00000016298	TNPO3	100	98.382	ENSCGRG00000010379	Tnpo3	100	98.382	Cricetulus_griseus_crigri
ENSCLAG00000016298	TNPO3	100	84.035	ENSCSEG00000005952	tnpo3	100	84.035	Cynoglossus_semilaevis
ENSCLAG00000016298	TNPO3	100	84.574	ENSCVAG00000020285	tnpo3	100	84.574	Cyprinodon_variegatus
ENSCLAG00000016298	TNPO3	100	84.898	ENSDARG00000045680	tnpo3	100	84.898	Danio_rerio
ENSCLAG00000016298	TNPO3	100	98.706	ENSDNOG00000002556	TNPO3	100	98.706	Dasypus_novemcinctus
ENSCLAG00000016298	TNPO3	62	97.582	ENSDORG00000002433	Tnpo3	95	97.582	Dipodomys_ordii
ENSCLAG00000016298	TNPO3	99	42.015	FBgn0031456	Tnpo-SR	99	42.015	Drosophila_melanogaster
ENSCLAG00000016298	TNPO3	95	99.560	ENSETEG00000002101	TNPO3	90	99.560	Echinops_telfairi
ENSCLAG00000016298	TNPO3	100	70.442	ENSEBUG00000016931	tnpo3	100	70.442	Eptatretus_burgeri
ENSCLAG00000016298	TNPO3	100	98.598	ENSEASG00005008677	TNPO3	100	98.598	Equus_asinus_asinus
ENSCLAG00000016298	TNPO3	100	98.598	ENSECAG00000012815	TNPO3	100	98.598	Equus_caballus
ENSCLAG00000016298	TNPO3	99	92.585	ENSEEUG00000005178	TNPO3	98	92.585	Erinaceus_europaeus
ENSCLAG00000016298	TNPO3	61	32.701	ENSEEUG00000011681	IPO13	73	30.493	Erinaceus_europaeus
ENSCLAG00000016298	TNPO3	82	34.314	ENSELUG00000003341	si:ch73-182a11.2	76	34.314	Esox_lucius
ENSCLAG00000016298	TNPO3	99	86.024	ENSELUG00000012153	tnpo3	99	86.024	Esox_lucius
ENSCLAG00000016298	TNPO3	100	98.813	ENSFCAG00000018186	TNPO3	100	98.813	Felis_catus
ENSCLAG00000016298	TNPO3	96	88.457	ENSFALG00000010667	TNPO3	100	88.457	Ficedula_albicollis
ENSCLAG00000016298	TNPO3	100	98.278	ENSFDAG00000019578	TNPO3	100	98.278	Fukomys_damarensis
ENSCLAG00000016298	TNPO3	100	84.574	ENSFHEG00000012859	tnpo3	100	84.574	Fundulus_heteroclitus
ENSCLAG00000016298	TNPO3	100	84.466	ENSGMOG00000007324	tnpo3	100	84.466	Gadus_morhua
ENSCLAG00000016298	TNPO3	61	94.306	ENSGALG00000039420	TNPO3	98	94.306	Gallus_gallus
ENSCLAG00000016298	TNPO3	100	84.682	ENSGACG00000000699	tnpo3	100	84.682	Gasterosteus_aculeatus
ENSCLAG00000016298	TNPO3	93	93.496	ENSGAGG00000006777	TNPO3	100	93.496	Gopherus_agassizii
ENSCLAG00000016298	TNPO3	100	98.706	ENSGGOG00000008339	TNPO3	100	98.706	Gorilla_gorilla
ENSCLAG00000016298	TNPO3	100	84.790	ENSHBUG00000008351	tnpo3	100	84.790	Haplochromis_burtoni
ENSCLAG00000016298	TNPO3	100	98.813	ENSHGLG00000004463	TNPO3	100	98.813	Heterocephalus_glaber_female
ENSCLAG00000016298	TNPO3	100	98.813	ENSHGLG00100005509	TNPO3	100	98.813	Heterocephalus_glaber_male
ENSCLAG00000016298	TNPO3	100	84.142	ENSHCOG00000007221	tnpo3	100	84.142	Hippocampus_comes
ENSCLAG00000016298	TNPO3	100	84.250	ENSIPUG00000014979	TNPO3	99	84.250	Ictalurus_punctatus
ENSCLAG00000016298	TNPO3	100	98.706	ENSSTOG00000004885	TNPO3	100	98.706	Ictidomys_tridecemlineatus
ENSCLAG00000016298	TNPO3	100	91.300	ENSJJAG00000013530	Tnpo3	100	91.006	Jaculus_jaculus
ENSCLAG00000016298	TNPO3	100	84.790	ENSKMAG00000010497	tnpo3	100	84.790	Kryptolebias_marmoratus
ENSCLAG00000016298	TNPO3	96	83.202	ENSLBEG00000016595	tnpo3	100	83.202	Labrus_bergylta
ENSCLAG00000016298	TNPO3	96	80.609	ENSLBEG00000011988	-	99	80.609	Labrus_bergylta
ENSCLAG00000016298	TNPO3	84	90.270	ENSLACG00000002351	TNPO3	99	90.270	Latimeria_chalumnae
ENSCLAG00000016298	TNPO3	100	86.839	ENSLOCG00000015556	tnpo3	100	86.839	Lepisosteus_oculatus
ENSCLAG00000016298	TNPO3	100	98.067	ENSLAFG00000002738	TNPO3	100	98.067	Loxodonta_africana
ENSCLAG00000016298	TNPO3	100	98.706	ENSMFAG00000032385	TNPO3	100	98.706	Macaca_fascicularis
ENSCLAG00000016298	TNPO3	100	98.706	ENSMMUG00000004311	TNPO3	100	98.706	Macaca_mulatta
ENSCLAG00000016298	TNPO3	100	98.706	ENSMNEG00000045277	TNPO3	100	98.706	Macaca_nemestrina
ENSCLAG00000016298	TNPO3	100	98.706	ENSMLEG00000037881	TNPO3	100	98.706	Mandrillus_leucophaeus
ENSCLAG00000016298	TNPO3	100	85.113	ENSMAMG00000021096	tnpo3	100	85.113	Mastacembelus_armatus
ENSCLAG00000016298	TNPO3	100	84.790	ENSMZEG00005015084	tnpo3	100	84.790	Maylandia_zebra
ENSCLAG00000016298	TNPO3	79	88.066	ENSMGAG00000002839	TNPO3	99	88.066	Meleagris_gallopavo
ENSCLAG00000016298	TNPO3	100	98.274	ENSMAUG00000013463	Tnpo3	100	98.274	Mesocricetus_auratus
ENSCLAG00000016298	TNPO3	68	35.659	ENSMICG00000011003	IPO13	77	33.136	Microcebus_murinus
ENSCLAG00000016298	TNPO3	100	98.813	ENSMICG00000000140	TNPO3	100	98.813	Microcebus_murinus
ENSCLAG00000016298	TNPO3	100	98.382	ENSMOCG00000013264	Tnpo3	100	98.382	Microtus_ochrogaster
ENSCLAG00000016298	TNPO3	100	84.250	ENSMMOG00000005887	tnpo3	100	84.250	Mola_mola
ENSCLAG00000016298	TNPO3	100	96.548	ENSMODG00000014700	TNPO3	100	96.548	Monodelphis_domestica
ENSCLAG00000016298	TNPO3	100	84.574	ENSMALG00000006675	tnpo3	100	84.574	Monopterus_albus
ENSCLAG00000016298	TNPO3	100	98.382	MGP_CAROLIEiJ_G0028176	Tnpo3	100	98.382	Mus_caroli
ENSCLAG00000016298	TNPO3	100	98.382	ENSMUSG00000012535	Tnpo3	100	98.382	Mus_musculus
ENSCLAG00000016298	TNPO3	100	98.274	MGP_PahariEiJ_G0021934	Tnpo3	100	98.274	Mus_pahari
ENSCLAG00000016298	TNPO3	100	98.274	MGP_SPRETEiJ_G0029176	Tnpo3	100	98.274	Mus_spretus
ENSCLAG00000016298	TNPO3	100	98.813	ENSMPUG00000006021	TNPO3	100	98.813	Mustela_putorius_furo
ENSCLAG00000016298	TNPO3	100	88.242	ENSMLUG00000000947	TNPO3	100	88.242	Myotis_lucifugus
ENSCLAG00000016298	TNPO3	100	98.706	ENSNGAG00000008722	Tnpo3	100	98.706	Nannospalax_galili
ENSCLAG00000016298	TNPO3	100	83.172	ENSNBRG00000019001	tnpo3	100	84.400	Neolamprologus_brichardi
ENSCLAG00000016298	TNPO3	100	95.005	ENSNLEG00000012491	TNPO3	100	95.005	Nomascus_leucogenys
ENSCLAG00000016298	TNPO3	92	80.704	ENSMEUG00000002445	TNPO3	91	80.704	Notamacropus_eugenii
ENSCLAG00000016298	TNPO3	91	99.457	ENSOPRG00000006163	TNPO3	90	99.457	Ochotona_princeps
ENSCLAG00000016298	TNPO3	98	98.565	ENSODEG00000012826	TNPO3	100	98.565	Octodon_degus
ENSCLAG00000016298	TNPO3	100	85.005	ENSONIG00000007604	tnpo3	100	85.005	Oreochromis_niloticus
ENSCLAG00000016298	TNPO3	95	92.108	ENSOANG00000011451	TNPO3	100	92.108	Ornithorhynchus_anatinus
ENSCLAG00000016298	TNPO3	99	94.874	ENSOCUG00000010105	TNPO3	99	94.874	Oryctolagus_cuniculus
ENSCLAG00000016298	TNPO3	100	83.711	ENSORLG00000029369	tnpo3	100	83.711	Oryzias_latipes
ENSCLAG00000016298	TNPO3	100	83.711	ENSORLG00020003464	tnpo3	100	83.711	Oryzias_latipes_hni
ENSCLAG00000016298	TNPO3	100	83.819	ENSORLG00015002610	tnpo3	100	83.819	Oryzias_latipes_hsok
ENSCLAG00000016298	TNPO3	100	84.142	ENSOMEG00000021006	tnpo3	100	84.142	Oryzias_melastigma
ENSCLAG00000016298	TNPO3	100	98.598	ENSOGAG00000015340	TNPO3	100	98.598	Otolemur_garnettii
ENSCLAG00000016298	TNPO3	100	97.843	ENSOARG00000004026	TNPO3	100	97.843	Ovis_aries
ENSCLAG00000016298	TNPO3	100	98.706	ENSPPAG00000034975	TNPO3	100	98.706	Pan_paniscus
ENSCLAG00000016298	TNPO3	100	98.813	ENSPPRG00000002050	TNPO3	100	98.813	Panthera_pardus
ENSCLAG00000016298	TNPO3	100	98.813	ENSPTIG00000016167	TNPO3	100	98.813	Panthera_tigris_altaica
ENSCLAG00000016298	TNPO3	100	98.706	ENSPTRG00000019676	TNPO3	100	98.706	Pan_troglodytes
ENSCLAG00000016298	TNPO3	98	98.570	ENSPANG00000022226	TNPO3	99	98.570	Papio_anubis
ENSCLAG00000016298	TNPO3	100	79.570	ENSPKIG00000008628	-	100	79.570	Paramormyrops_kingsleyae
ENSCLAG00000016298	TNPO3	100	82.848	ENSPKIG00000023234	tnpo3	100	82.848	Paramormyrops_kingsleyae
ENSCLAG00000016298	TNPO3	61	79.577	ENSPMGG00000009763	tnpo3	99	79.577	Periophthalmus_magnuspinnatus
ENSCLAG00000016298	TNPO3	100	98.274	ENSPEMG00000000422	Tnpo3	100	98.274	Peromyscus_maniculatus_bairdii
ENSCLAG00000016298	TNPO3	95	71.928	ENSPMAG00000008621	tnpo3	100	71.928	Petromyzon_marinus
ENSCLAG00000016298	TNPO3	100	96.009	ENSPCIG00000011366	TNPO3	100	96.009	Phascolarctos_cinereus
ENSCLAG00000016298	TNPO3	100	84.466	ENSPFOG00000013592	tnpo3	99	84.466	Poecilia_formosa
ENSCLAG00000016298	TNPO3	100	84.466	ENSPLAG00000010188	tnpo3	100	84.466	Poecilia_latipinna
ENSCLAG00000016298	TNPO3	100	84.574	ENSPMEG00000022731	tnpo3	100	84.574	Poecilia_mexicana
ENSCLAG00000016298	TNPO3	100	98.706	ENSPPYG00000017990	TNPO3	100	98.706	Pongo_abelii
ENSCLAG00000016298	TNPO3	95	98.507	ENSPCAG00000010158	TNPO3	98	88.297	Procavia_capensis
ENSCLAG00000016298	TNPO3	88	99.342	ENSPCOG00000023901	TNPO3	97	99.342	Propithecus_coquereli
ENSCLAG00000016298	TNPO3	99	91.736	ENSPVAG00000015757	TNPO3	98	91.736	Pteropus_vampyrus
ENSCLAG00000016298	TNPO3	100	84.790	ENSPNYG00000002349	tnpo3	100	84.790	Pundamilia_nyererei
ENSCLAG00000016298	TNPO3	100	86.084	ENSPNAG00000001142	tnpo3	100	86.084	Pygocentrus_nattereri
ENSCLAG00000016298	TNPO3	100	98.274	ENSRNOG00000021758	Tnpo3	100	98.274	Rattus_norvegicus
ENSCLAG00000016298	TNPO3	100	98.598	ENSRBIG00000042549	TNPO3	100	98.598	Rhinopithecus_bieti
ENSCLAG00000016298	TNPO3	100	98.598	ENSRROG00000039264	TNPO3	100	98.598	Rhinopithecus_roxellana
ENSCLAG00000016298	TNPO3	100	79.396	ENSSBOG00000029642	TNPO3	100	79.396	Saimiri_boliviensis_boliviensis
ENSCLAG00000016298	TNPO3	96	96.731	ENSSHAG00000006837	TNPO3	100	96.731	Sarcophilus_harrisii
ENSCLAG00000016298	TNPO3	100	83.927	ENSSFOG00015001474	tnpo3	100	83.927	Scleropages_formosus
ENSCLAG00000016298	TNPO3	100	80.106	ENSSFOG00015004256	tnpo3	100	80.106	Scleropages_formosus
ENSCLAG00000016298	TNPO3	100	85.329	ENSSMAG00000010422	tnpo3	97	85.329	Scophthalmus_maximus
ENSCLAG00000016298	TNPO3	100	85.545	ENSSDUG00000004850	tnpo3	100	85.545	Seriola_dumerili
ENSCLAG00000016298	TNPO3	100	85.545	ENSSLDG00000016927	tnpo3	100	85.545	Seriola_lalandi_dorsalis
ENSCLAG00000016298	TNPO3	95	85.433	ENSSARG00000013893	TNPO3	98	85.433	Sorex_araneus
ENSCLAG00000016298	TNPO3	99	87.135	ENSSPUG00000007457	TNPO3	99	87.055	Sphenodon_punctatus
ENSCLAG00000016298	TNPO3	79	86.438	ENSSPAG00000014209	tnpo3	99	86.438	Stegastes_partitus
ENSCLAG00000016298	TNPO3	100	98.706	ENSSSCG00000016572	TNPO3	100	98.722	Sus_scrofa
ENSCLAG00000016298	TNPO3	100	83.011	ENSTNIG00000003347	tnpo3	100	83.011	Tetraodon_nigroviridis
ENSCLAG00000016298	TNPO3	87	99.353	ENSTBEG00000007220	TNPO3	90	99.353	Tupaia_belangeri
ENSCLAG00000016298	TNPO3	95	99.074	ENSTTRG00000014618	TNPO3	90	99.074	Tursiops_truncatus
ENSCLAG00000016298	TNPO3	100	98.813	ENSUAMG00000021281	TNPO3	100	98.813	Ursus_americanus
ENSCLAG00000016298	TNPO3	100	98.813	ENSUMAG00000006882	TNPO3	100	98.813	Ursus_maritimus
ENSCLAG00000016298	TNPO3	80	100.000	ENSVPAG00000006166	TNPO3	80	100.000	Vicugna_pacos
ENSCLAG00000016298	TNPO3	100	98.813	ENSVVUG00000011004	TNPO3	100	99.729	Vulpes_vulpes
ENSCLAG00000016298	TNPO3	100	82.151	ENSXETG00000015009	tnpo3	100	82.151	Xenopus_tropicalis
ENSCLAG00000016298	TNPO3	100	84.250	ENSXMAG00000013062	tnpo3	100	84.250	Xiphophorus_maculatus