EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016342 (Gene tree)
Gene ID: 102023849
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 67632 bases
Position: chrJH721898.1:18267517-18335148
Accession: 102023849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000023807	PAP_RNA-bind	PF04926.15	5.3e-25	1	1
ENSCLAP00000023806	PAP_RNA-bind	PF04926.15	4.8e-23	1	1
ENSCLAP00000023808	PAP_RNA-bind	PF04926.15	5.3e-23	1	1
ENSCLAP00000023805	PAP_RNA-bind	PF04926.15	5.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024034	PAPOLA-204	2214	-	ENSCLAP00000023808	737 (aa)	-	-
ENSCLAT00000024033	PAPOLA-203	2082	-	ENSCLAP00000023807	693 (aa)	-	-
ENSCLAT00000024032	PAPOLA-202	6251	XM_005390404	ENSCLAP00000023806	718 (aa)	XP_005390461	-
ENSCLAT00000024031	PAPOLA-201	6499	XM_005390400	ENSCLAP00000023805	739 (aa)	XP_005390457	UPI00038EC168

Gene Model

Click here to download ENSCLAG00000016342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016342	PAPOLA	93	81.960	ENSCLAG00000004689	PAPOLB	100	81.960
ENSCLAG00000016342	PAPOLA	99	61.015	ENSCLAG00000008603	PAPOLG	99	61.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016342	PAPOLA	100	97.790	ENSG00000090060	PAPOLA	99	99.091	Homo_sapiens
ENSCLAG00000016342	PAPOLA	99	97.290	ENSAMEG00000014142	PAPOLA	99	97.290	Ailuropoda_melanoleuca
ENSCLAG00000016342	PAPOLA	99	91.599	ENSAPLG00000006645	PAPOLA	99	91.045	Anas_platyrhynchos
ENSCLAG00000016342	PAPOLA	99	91.588	ENSACAG00000013474	PAPOLA	99	95.144	Anolis_carolinensis
ENSCLAG00000016342	PAPOLA	77	91.573	ENSANAG00000027941	-	98	91.573	Aotus_nancymaae
ENSCLAG00000016342	PAPOLA	100	97.514	ENSANAG00000018274	PAPOLA	99	99.449	Aotus_nancymaae
ENSCLAG00000016342	PAPOLA	100	73.534	ENSAMXG00000018141	papola	99	85.099	Astyanax_mexicanus
ENSCLAG00000016342	PAPOLA	100	97.691	ENSBTAG00000004054	PAPOLA	100	97.691	Bos_taurus
ENSCLAG00000016342	PAPOLA	100	97.711	ENSCJAG00000006512	PAPOLA	99	99.449	Callithrix_jacchus
ENSCLAG00000016342	PAPOLA	100	96.644	ENSCAFG00000017783	PAPOLA	100	96.644	Canis_familiaris
ENSCLAG00000016342	PAPOLA	100	97.354	ENSCAFG00020011550	PAPOLA	100	97.354	Canis_lupus_dingo
ENSCLAG00000016342	PAPOLA	100	96.879	ENSCHIG00000025004	-	100	96.752	Capra_hircus
ENSCLAG00000016342	PAPOLA	99	96.957	ENSTSYG00000012384	PAPOLA	99	96.957	Carlito_syrichta
ENSCLAG00000016342	PAPOLA	100	95.670	ENSCPOG00000002648	PAPOLA	100	95.670	Cavia_porcellus
ENSCLAG00000016342	PAPOLA	100	97.514	ENSCCAG00000025120	PAPOLA	100	97.514	Cebus_capucinus
ENSCLAG00000016342	PAPOLA	100	97.652	ENSCATG00000018815	PAPOLA	99	99.628	Cercocebus_atys
ENSCLAG00000016342	PAPOLA	100	97.584	ENSCSAG00000010516	PAPOLA	100	97.584	Chlorocebus_sabaeus
ENSCLAG00000016342	PAPOLA	72	82.834	ENSCHOG00000001115	PAPOLA	72	82.834	Choloepus_hoffmanni
ENSCLAG00000016342	PAPOLA	100	92.973	ENSCPBG00000024125	PAPOLA	100	92.973	Chrysemys_picta_bellii
ENSCLAG00000016342	PAPOLA	100	92.328	ENSCANG00000000159	PAPOLA	100	92.328	Colobus_angolensis_palliatus
ENSCLAG00000016342	PAPOLA	100	97.258	ENSCGRG00001022693	-	100	97.258	Cricetulus_griseus_chok1gshd
ENSCLAG00000016342	PAPOLA	99	84.011	ENSCGRG00001002732	-	99	84.011	Cricetulus_griseus_chok1gshd
ENSCLAG00000016342	PAPOLA	100	87.957	ENSCGRG00001000229	-	99	89.550	Cricetulus_griseus_chok1gshd
ENSCLAG00000016342	PAPOLA	98	80.992	ENSCGRG00000001888	-	96	80.992	Cricetulus_griseus_crigri
ENSCLAG00000016342	PAPOLA	100	84.278	ENSCGRG00000000257	-	100	84.278	Cricetulus_griseus_crigri
ENSCLAG00000016342	PAPOLA	99	97.246	ENSCGRG00000003664	-	100	97.246	Cricetulus_griseus_crigri
ENSCLAG00000016342	PAPOLA	70	53.734	ENSCSEG00000001841	-	71	53.958	Cynoglossus_semilaevis
ENSCLAG00000016342	PAPOLA	100	71.562	ENSDARG00000009585	papola	100	71.350	Danio_rerio
ENSCLAG00000016342	PAPOLA	65	89.407	ENSDORG00000013415	-	100	90.678	Dipodomys_ordii
ENSCLAG00000016342	PAPOLA	99	84.396	ENSETEG00000004889	PAPOLA	100	84.261	Echinops_telfairi
ENSCLAG00000016342	PAPOLA	100	69.374	ENSELUG00000018972	papola	100	69.374	Esox_lucius
ENSCLAG00000016342	PAPOLA	100	98.268	ENSFCAG00000006784	PAPOLA	100	98.268	Felis_catus
ENSCLAG00000016342	PAPOLA	99	93.750	ENSFALG00000002547	PAPOLA	98	87.763	Ficedula_albicollis
ENSCLAG00000016342	PAPOLA	99	97.681	ENSFDAG00000010370	PAPOLA	100	97.681	Fukomys_damarensis
ENSCLAG00000016342	PAPOLA	73	66.179	ENSGMOG00000010209	papola	100	67.420	Gadus_morhua
ENSCLAG00000016342	PAPOLA	100	90.676	ENSGALG00000033099	PAPOLA	100	90.257	Gallus_gallus
ENSCLAG00000016342	PAPOLA	69	54.375	ENSGACG00000006142	-	100	53.958	Gasterosteus_aculeatus
ENSCLAG00000016342	PAPOLA	96	95.166	ENSGAGG00000020500	PAPOLA	99	95.166	Gopherus_agassizii
ENSCLAG00000016342	PAPOLA	100	97.790	ENSGGOG00000006287	PAPOLA	100	97.790	Gorilla_gorilla
ENSCLAG00000016342	PAPOLA	99	86.512	ENSHGLG00000017457	-	100	85.695	Heterocephalus_glaber_female
ENSCLAG00000016342	PAPOLA	100	98.846	ENSHGLG00000007909	-	100	98.846	Heterocephalus_glaber_female
ENSCLAG00000016342	PAPOLA	100	80.108	ENSHGLG00000007467	-	100	80.379	Heterocephalus_glaber_female
ENSCLAG00000016342	PAPOLA	100	98.701	ENSHGLG00100017273	PAPOLA	100	98.701	Heterocephalus_glaber_male
ENSCLAG00000016342	PAPOLA	100	67.970	ENSIPUG00000005919	papola	100	68.182	Ictalurus_punctatus
ENSCLAG00000016342	PAPOLA	100	98.124	ENSSTOG00000011471	PAPOLA	100	98.124	Ictidomys_tridecemlineatus
ENSCLAG00000016342	PAPOLA	99	97.101	ENSJJAG00000024340	Papola	100	97.101	Jaculus_jaculus
ENSCLAG00000016342	PAPOLA	99	77.193	ENSLACG00000018136	PAPOLA	99	77.193	Latimeria_chalumnae
ENSCLAG00000016342	PAPOLA	99	66.220	ENSLOCG00000008632	papola	99	66.488	Lepisosteus_oculatus
ENSCLAG00000016342	PAPOLA	99	96.739	ENSLAFG00000000946	PAPOLA	99	96.739	Loxodonta_africana
ENSCLAG00000016342	PAPOLA	100	97.652	ENSMFAG00000001792	PAPOLA	99	99.630	Macaca_fascicularis
ENSCLAG00000016342	PAPOLA	100	97.584	ENSMMUG00000018610	PAPOLA	100	97.704	Macaca_mulatta
ENSCLAG00000016342	PAPOLA	100	97.652	ENSMNEG00000043747	PAPOLA	100	97.704	Macaca_nemestrina
ENSCLAG00000016342	PAPOLA	100	97.652	ENSMLEG00000032066	PAPOLA	100	97.652	Mandrillus_leucophaeus
ENSCLAG00000016342	PAPOLA	84	89.871	ENSMGAG00000013228	-	100	89.372	Meleagris_gallopavo
ENSCLAG00000016342	PAPOLA	100	97.691	ENSMAUG00000017178	Papola	100	97.691	Mesocricetus_auratus
ENSCLAG00000016342	PAPOLA	100	98.050	ENSMICG00000010347	PAPOLA	100	98.050	Microcebus_murinus
ENSCLAG00000016342	PAPOLA	100	97.691	ENSMOCG00000021670	Papola	100	97.691	Microtus_ochrogaster
ENSCLAG00000016342	PAPOLA	99	81.667	ENSMODG00000001969	-	99	81.806	Monodelphis_domestica
ENSCLAG00000016342	PAPOLA	100	95.940	ENSMODG00000012887	-	100	95.940	Monodelphis_domestica
ENSCLAG00000016342	PAPOLA	100	96.392	MGP_CAROLIEiJ_G0018093	Papola	100	96.392	Mus_caroli
ENSCLAG00000016342	PAPOLA	100	96.681	ENSMUSG00000021111	Papola	100	96.681	Mus_musculus
ENSCLAG00000016342	PAPOLA	100	96.681	MGP_PahariEiJ_G0029850	Papola	100	96.681	Mus_pahari
ENSCLAG00000016342	PAPOLA	100	96.825	MGP_SPRETEiJ_G0018943	Papola	100	96.825	Mus_spretus
ENSCLAG00000016342	PAPOLA	100	97.564	ENSMPUG00000003054	PAPOLA	100	97.564	Mustela_putorius_furo
ENSCLAG00000016342	PAPOLA	100	95.535	ENSMLUG00000010922	PAPOLA	100	95.535	Myotis_lucifugus
ENSCLAG00000016342	PAPOLA	100	96.681	ENSNGAG00000022172	Papola	100	96.681	Nannospalax_galili
ENSCLAG00000016342	PAPOLA	100	92.420	ENSNLEG00000000625	PAPOLA	100	92.420	Nomascus_leucogenys
ENSCLAG00000016342	PAPOLA	67	87.879	ENSMEUG00000007831	-	74	87.879	Notamacropus_eugenii
ENSCLAG00000016342	PAPOLA	98	91.678	ENSOPRG00000007625	PAPOLA	100	91.678	Ochotona_princeps
ENSCLAG00000016342	PAPOLA	69	54.202	ENSONIG00000001062	-	96	54.202	Oreochromis_niloticus
ENSCLAG00000016342	PAPOLA	99	96.527	ENSOANG00000013812	PAPOLA	99	96.527	Ornithorhynchus_anatinus
ENSCLAG00000016342	PAPOLA	99	94.437	ENSOCUG00000011531	PAPOLA	99	94.437	Oryctolagus_cuniculus
ENSCLAG00000016342	PAPOLA	100	97.432	ENSOGAG00000004611	PAPOLA	100	97.432	Otolemur_garnettii
ENSCLAG00000016342	PAPOLA	100	97.023	ENSOARG00000016579	-	100	97.023	Ovis_aries
ENSCLAG00000016342	PAPOLA	100	97.790	ENSPPAG00000030505	PAPOLA	100	97.790	Pan_paniscus
ENSCLAG00000016342	PAPOLA	100	98.050	ENSPPRG00000008616	PAPOLA	100	98.050	Panthera_pardus
ENSCLAG00000016342	PAPOLA	99	98.042	ENSPTIG00000018852	PAPOLA	99	98.042	Panthera_tigris_altaica
ENSCLAG00000016342	PAPOLA	100	97.790	ENSPTRG00000006704	PAPOLA	100	97.790	Pan_troglodytes
ENSCLAG00000016342	PAPOLA	100	97.652	ENSPANG00000025582	PAPOLA	100	97.704	Papio_anubis
ENSCLAG00000016342	PAPOLA	96	74.811	ENSPKIG00000014471	papola	100	70.850	Paramormyrops_kingsleyae
ENSCLAG00000016342	PAPOLA	100	93.243	ENSPSIG00000014157	PAPOLA	87	92.838	Pelodiscus_sinensis
ENSCLAG00000016342	PAPOLA	100	97.547	ENSPEMG00000000043	Papola	100	97.547	Peromyscus_maniculatus_bairdii
ENSCLAG00000016342	PAPOLA	100	95.541	ENSPCIG00000013234	PAPOLA	100	95.541	Phascolarctos_cinereus
ENSCLAG00000016342	PAPOLA	100	95.302	ENSPPYG00000006128	PAPOLA	100	95.302	Pongo_abelii
ENSCLAG00000016342	PAPOLA	89	90.244	ENSPCAG00000004199	PAPOLA	100	90.244	Procavia_capensis
ENSCLAG00000016342	PAPOLA	100	94.437	ENSPCOG00000022117	PAPOLA	99	94.693	Propithecus_coquereli
ENSCLAG00000016342	PAPOLA	100	96.211	ENSPVAG00000013925	PAPOLA	100	96.211	Pteropus_vampyrus
ENSCLAG00000016342	PAPOLA	100	71.932	ENSPNAG00000010467	papola	100	72.521	Pygocentrus_nattereri
ENSCLAG00000016342	PAPOLA	100	94.993	ENSRNOG00000004827	Papola	100	94.993	Rattus_norvegicus
ENSCLAG00000016342	PAPOLA	99	96.844	ENSRBIG00000038490	PAPOLA	100	96.844	Rhinopithecus_bieti
ENSCLAG00000016342	PAPOLA	100	97.514	ENSRROG00000025545	PAPOLA	100	97.514	Rhinopithecus_roxellana
ENSCLAG00000016342	PAPOLA	100	97.174	ENSSBOG00000024061	PAPOLA	100	97.561	Saimiri_boliviensis_boliviensis
ENSCLAG00000016342	PAPOLA	99	95.788	ENSSHAG00000015211	PAPOLA	99	95.788	Sarcophilus_harrisii
ENSCLAG00000016342	PAPOLA	100	70.959	ENSSFOG00015004431	papola	99	84.991	Scleropages_formosus
ENSCLAG00000016342	PAPOLA	98	47.507	ENSSDUG00000018247	-	97	47.584	Seriola_dumerili
ENSCLAG00000016342	PAPOLA	100	92.703	ENSSPUG00000005835	PAPOLA	100	92.703	Sphenodon_punctatus
ENSCLAG00000016342	PAPOLA	100	97.980	ENSSSCG00000002505	-	100	97.980	Sus_scrofa
ENSCLAG00000016342	PAPOLA	99	91.180	ENSTGUG00000012687	PAPOLA	99	90.625	Taeniopygia_guttata
ENSCLAG00000016342	PAPOLA	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSCLAG00000016342	PAPOLA	79	96.875	ENSTTRG00000005717	PAPOLA	80	94.805	Tursiops_truncatus
ENSCLAG00000016342	PAPOLA	61	99.052	ENSUAMG00000025737	PAPOLA	98	99.052	Ursus_americanus
ENSCLAG00000016342	PAPOLA	99	96.739	ENSVPAG00000006464	PAPOLA	100	96.739	Vicugna_pacos
ENSCLAG00000016342	PAPOLA	100	97.980	ENSVVUG00000028340	PAPOLA	100	97.980	Vulpes_vulpes
ENSCLAG00000016342	PAPOLA	100	83.424	ENSXETG00000013949	papola	100	83.152	Xenopus_tropicalis