EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016426 (Gene tree)
Gene ID: -
Gene Symbol: OVOL1
Alias: HOVO1
Full Name: ovo like transcriptional repressor 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 12067 bases
Position: chrJH721882.1:19522384-19534450
Accession: 102028647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000023935	zf-C2H2	PF00096.26	9.2e-14	1	3
ENSCLAP00000023935	zf-C2H2	PF00096.26	9.2e-14	2	3
ENSCLAP00000023935	zf-C2H2	PF00096.26	9.2e-14	3	3
ENSCLAP00000023935	zf-met	PF12874.7	0.00025	1	2
ENSCLAP00000023935	zf-met	PF12874.7	0.00025	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024163	OVOL1-201	4761	XM_013513853	ENSCLAP00000023935	298 (aa)	XP_013369307	-

Gene Model

Click here to download ENSCLAG00000016426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016426	OVOL1	50	32.353	ENSCLAG00000000758	-	52	32.353
ENSCLAG00000016426	OVOL1	51	36.634	ENSCLAG00000010195	-	85	36.634
ENSCLAG00000016426	OVOL1	55	36.082	ENSCLAG00000003483	ZNF112	61	36.082
ENSCLAG00000016426	OVOL1	64	40.404	ENSCLAG00000012556	-	79	38.947
ENSCLAG00000016426	OVOL1	52	35.000	ENSCLAG00000014648	-	76	35.000
ENSCLAG00000016426	OVOL1	64	41.333	ENSCLAG00000000250	ZNF550	52	41.333
ENSCLAG00000016426	OVOL1	52	31.915	ENSCLAG00000005392	PRDM5	81	31.915
ENSCLAG00000016426	OVOL1	62	43.137	ENSCLAG00000007793	ZNF236	51	43.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016426	OVOL1	79	94.068	ENSG00000172818	OVOL1	100	94.634	Homo_sapiens
ENSCLAG00000016426	OVOL1	79	66.949	ENSCPBG00000023411	OVOL1	88	66.949	Chrysemys_picta_bellii
ENSCLAG00000016426	OVOL1	79	88.889	ENSDNOG00000024062	OVOL1	96	88.889	Dasypus_novemcinctus
ENSCLAG00000016426	OVOL1	79	94.915	ENSDORG00000028510	Ovol1	88	94.915	Dipodomys_ordii
ENSCLAG00000016426	OVOL1	53	96.815	ENSEEUG00000010161	OVOL1	98	96.815	Erinaceus_europaeus
ENSCLAG00000016426	OVOL1	74	70.455	ENSGAGG00000008199	OVOL1	82	70.455	Gopherus_agassizii
ENSCLAG00000016426	OVOL1	79	94.068	ENSJJAG00000024400	Ovol1	88	94.068	Jaculus_jaculus
ENSCLAG00000016426	OVOL1	79	94.492	MGP_CAROLIEiJ_G0022558	Ovol1	88	94.492	Mus_caroli
ENSCLAG00000016426	OVOL1	79	94.492	ENSMUSG00000024922	Ovol1	88	94.492	Mus_musculus
ENSCLAG00000016426	OVOL1	79	93.644	MGP_PahariEiJ_G0014055	Ovol1	88	93.644	Mus_pahari
ENSCLAG00000016426	OVOL1	79	94.068	MGP_SPRETEiJ_G0023472	Ovol1	88	94.068	Mus_spretus
ENSCLAG00000016426	OVOL1	79	94.068	ENSOGAG00000016496	OVOL1	88	94.068	Otolemur_garnettii
ENSCLAG00000016426	OVOL1	69	67.961	ENSPSIG00000002913	OVOL1	73	67.961	Pelodiscus_sinensis
ENSCLAG00000016426	OVOL1	80	93.277	ENSRNOG00000020669	Ovol1	89	93.277	Rattus_norvegicus