EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016615 (Gene tree)
Gene ID: 102026962
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3H
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 3063 bases
Position: chrJH721873.1:25057717-25060779
Accession: 102026962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000024206	APOBEC_N	PF08210.11	1.1e-38	1	1
ENSCLAP00000024206	APOBEC_C	PF05240.14	2.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024439	-	1861	XM_013511480	ENSCLAP00000024206	202 (aa)	XP_013366934	UPI00038F0DA4

Gene Model

Click here to download ENSCLAG00000016615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016615	-	54	36.752	ENSCLAG00000014645	APOBEC1	51	36.752

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016615	-	88	53.333	ENSG00000100298	APOBEC3H	98	53.333	Homo_sapiens
ENSCLAG00000016615	-	96	48.990	ENSAMEG00000010818	-	80	48.990	Ailuropoda_melanoleuca
ENSCLAG00000016615	-	96	51.980	ENSANAG00000025410	APOBEC3H	92	52.657	Aotus_nancymaae
ENSCLAG00000016615	-	88	53.672	ENSBTAG00000007755	APOBEC3H	91	54.286	Bos_taurus
ENSCLAG00000016615	-	87	51.111	ENSCJAG00000012524	APOBEC3H	90	51.111	Callithrix_jacchus
ENSCLAG00000016615	-	96	49.223	ENSCAFG00000001361	APOBEC3Z3	99	49.223	Canis_familiaris
ENSCLAG00000016615	-	89	48.889	ENSCAFG00020002584	-	91	49.153	Canis_lupus_dingo
ENSCLAG00000016615	-	88	53.333	ENSCHIG00000026580	-	95	53.333	Capra_hircus
ENSCLAG00000016615	-	86	50.575	ENSTSYG00000032894	-	99	50.575	Carlito_syrichta
ENSCLAG00000016615	-	99	74.500	ENSCPOG00000009257	-	90	74.500	Cavia_porcellus
ENSCLAG00000016615	-	95	48.485	ENSCCAG00000008525	APOBEC3H	95	49.261	Cebus_capucinus
ENSCLAG00000016615	-	86	55.367	ENSCATG00000030302	APOBEC3H	98	55.367	Cercocebus_atys
ENSCLAG00000016615	-	98	54.000	ENSCSAG00000006371	APOBEC3H	95	54.000	Chlorocebus_sabaeus
ENSCLAG00000016615	-	96	53.030	ENSCGRG00001022976	Apobec3	90	53.030	Cricetulus_griseus_chok1gshd
ENSCLAG00000016615	-	96	53.030	ENSCGRG00000005621	Apobec3	90	53.030	Cricetulus_griseus_crigri
ENSCLAG00000016615	-	86	56.983	ENSDORG00000027271	-	87	56.983	Dipodomys_ordii
ENSCLAG00000016615	-	97	50.761	ENSECAG00000007726	APOBEC3H	85	50.761	Equus_caballus
ENSCLAG00000016615	-	96	52.850	ENSFCAG00000005251	APOBEC3Z3	98	52.850	Felis_catus
ENSCLAG00000016615	-	87	54.545	ENSSTOG00000007125	-	84	54.545	Ictidomys_tridecemlineatus
ENSCLAG00000016615	-	97	44.670	ENSJJAG00000016840	-	88	44.670	Jaculus_jaculus
ENSCLAG00000016615	-	88	53.977	ENSLAFG00000027404	-	94	53.977	Loxodonta_africana
ENSCLAG00000016615	-	98	53.500	ENSMFAG00000031827	APOBEC3H	95	53.500	Macaca_fascicularis
ENSCLAG00000016615	-	98	53.000	ENSMMUG00000001016	APOBEC3H	95	53.000	Macaca_mulatta
ENSCLAG00000016615	-	98	53.500	ENSMNEG00000039259	APOBEC3H	95	53.500	Macaca_nemestrina
ENSCLAG00000016615	-	98	53.500	ENSMLEG00000033417	APOBEC3H	95	53.500	Mandrillus_leucophaeus
ENSCLAG00000016615	-	96	50.505	ENSMAUG00000011683	Apobec3	86	50.505	Mesocricetus_auratus
ENSCLAG00000016615	-	96	50.515	ENSMOCG00000021576	Apobec3	83	51.546	Microtus_ochrogaster
ENSCLAG00000016615	-	96	48.980	MGP_CAROLIEiJ_G0020029	Apobec3	99	48.485	Mus_caroli
ENSCLAG00000016615	-	97	49.239	ENSMUSG00000009585	Apobec3	97	51.546	Mus_musculus
ENSCLAG00000016615	-	96	48.744	MGP_PahariEiJ_G0020031	-	90	48.744	Mus_pahari
ENSCLAG00000016615	-	96	48.469	MGP_SPRETEiJ_G0020927	Apobec3	92	47.980	Mus_spretus
ENSCLAG00000016615	-	96	51.813	ENSMPUG00000013239	-	91	51.813	Mustela_putorius_furo
ENSCLAG00000016615	-	98	50.254	ENSNGAG00000018998	Apobec3	99	50.254	Nannospalax_galili
ENSCLAG00000016615	-	99	53.695	ENSNLEG00000015218	-	96	53.695	Nomascus_leucogenys
ENSCLAG00000016615	-	96	44.262	ENSOCUG00000023913	-	90	44.262	Oryctolagus_cuniculus
ENSCLAG00000016615	-	88	54.237	ENSOARG00000016290	APOBEC3F	95	54.237	Ovis_aries
ENSCLAG00000016615	-	88	52.222	ENSPPAG00000036522	APOBEC3H	98	52.222	Pan_paniscus
ENSCLAG00000016615	-	87	35.714	ENSPPRG00000003675	-	93	35.714	Panthera_pardus
ENSCLAG00000016615	-	96	53.093	ENSPPRG00000003941	-	98	53.093	Panthera_pardus
ENSCLAG00000016615	-	96	53.093	ENSPTIG00000010283	-	98	53.093	Panthera_tigris_altaica
ENSCLAG00000016615	-	88	52.222	ENSPTRG00000014390	APOBEC3H	98	52.222	Pan_troglodytes
ENSCLAG00000016615	-	98	53.000	ENSPANG00000010774	APOBEC3H	95	53.000	Papio_anubis
ENSCLAG00000016615	-	98	49.000	ENSPEMG00000000456	Apobec3	82	49.000	Peromyscus_maniculatus_bairdii
ENSCLAG00000016615	-	97	51.515	ENSPPYG00000011834	-	96	50.739	Pongo_abelii
ENSCLAG00000016615	-	86	48.555	ENSPCAG00000015655	-	97	48.555	Procavia_capensis
ENSCLAG00000016615	-	87	51.705	ENSPVAG00000009462	-	99	51.705	Pteropus_vampyrus
ENSCLAG00000016615	-	64	38.760	ENSPVAG00000024267	-	97	38.760	Pteropus_vampyrus
ENSCLAG00000016615	-	63	40.157	ENSPVAG00000024161	-	95	40.157	Pteropus_vampyrus
ENSCLAG00000016615	-	89	50.543	ENSRNOG00000016852	Apobec3	90	50.543	Rattus_norvegicus
ENSCLAG00000016615	-	98	54.500	ENSRBIG00000029088	APOBEC3H	95	54.500	Rhinopithecus_bieti
ENSCLAG00000016615	-	98	54.500	ENSRROG00000024699	APOBEC3H	95	54.500	Rhinopithecus_roxellana
ENSCLAG00000016615	-	97	51.244	ENSSBOG00000030005	APOBEC3H	98	53.631	Saimiri_boliviensis_boliviensis
ENSCLAG00000016615	-	96	50.259	ENSSSCG00000000091	APOBEC3B	89	50.254	Sus_scrofa
ENSCLAG00000016615	-	84	54.118	ENSTBEG00000001532	-	99	54.118	Tupaia_belangeri
ENSCLAG00000016615	-	87	53.714	ENSTTRG00000001266	-	98	53.714	Tursiops_truncatus
ENSCLAG00000016615	-	93	50.256	ENSUAMG00000004427	-	88	50.256	Ursus_americanus
ENSCLAG00000016615	-	96	52.850	ENSUMAG00000014435	-	98	52.850	Ursus_maritimus
ENSCLAG00000016615	-	63	52.344	ENSVPAG00000011108	-	99	52.344	Vicugna_pacos
ENSCLAG00000016615	-	87	57.500	ENSVVUG00000014624	-	58	57.500	Vulpes_vulpes