EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016650 (Gene tree)
Gene ID: 106146228
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 15142 bases
Position: chrJH721911.1:16200442-16215583
Accession: 106146228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000024254	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024489	RAB5C-201	1543	XM_005394449	ENSCLAP00000024254	216 (aa)	XP_005394506	UPI00038EEA24

Gene Model

Click here to download ENSCLAG00000016650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016650's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016650	RAB5C	75	39.759	ENSCLAG00000005031	RAB33A	70	39.759
ENSCLAG00000016650	RAB5C	89	42.289	ENSCLAG00000003784	RAB25	93	42.289
ENSCLAG00000016650	RAB5C	90	43.750	ENSCLAG00000003207	RAB11B	94	43.750
ENSCLAG00000016650	RAB5C	77	32.934	ENSCLAG00000016519	KRAS	95	30.387
ENSCLAG00000016650	RAB5C	80	36.416	ENSCLAG00000000797	RAB23	73	36.416
ENSCLAG00000016650	RAB5C	73	30.625	ENSCLAG00000009672	RAB34	61	30.625
ENSCLAG00000016650	RAB5C	81	34.254	ENSCLAG00000002823	HRAS	94	34.254
ENSCLAG00000016650	RAB5C	94	39.806	ENSCLAG00000015536	RAB6A	98	39.806
ENSCLAG00000016650	RAB5C	81	37.143	ENSCLAG00000004324	RAB15	83	37.143
ENSCLAG00000016650	RAB5C	83	40.000	ENSCLAG00000014030	RAB30	91	40.000
ENSCLAG00000016650	RAB5C	77	33.333	ENSCLAG00000016162	RERG	84	33.333
ENSCLAG00000016650	RAB5C	100	86.111	ENSCLAG00000006053	-	100	86.111
ENSCLAG00000016650	RAB5C	75	36.585	ENSCLAG00000000113	RAB39B	77	36.585
ENSCLAG00000016650	RAB5C	89	37.949	ENSCLAG00000013339	RAB35	96	37.949
ENSCLAG00000016650	RAB5C	77	34.731	ENSCLAG00000006333	RAB7A	78	34.731
ENSCLAG00000016650	RAB5C	86	40.323	ENSCLAG00000009500	RAB14	87	40.323
ENSCLAG00000016650	RAB5C	94	40.291	ENSCLAG00000008913	RAB37	93	40.291
ENSCLAG00000016650	RAB5C	75	44.720	ENSCLAG00000005708	RAB2A	76	44.720
ENSCLAG00000016650	RAB5C	90	41.748	ENSCLAG00000007435	RAB11A	94	41.748
ENSCLAG00000016650	RAB5C	90	47.959	ENSCLAG00000006992	RAB31	98	47.959
ENSCLAG00000016650	RAB5C	89	44.330	ENSCLAG00000015776	RAB1B	96	44.330
ENSCLAG00000016650	RAB5C	78	36.416	ENSCLAG00000000494	RAB9A	86	36.416
ENSCLAG00000016650	RAB5C	93	38.164	ENSCLAG00000003133	RAB33B	89	38.164
ENSCLAG00000016650	RAB5C	77	44.311	ENSCLAG00000002400	RAB2B	79	46.053
ENSCLAG00000016650	RAB5C	89	36.979	ENSCLAG00000006603	-	95	36.979
ENSCLAG00000016650	RAB5C	75	30.539	ENSCLAG00000008212	DNAJC27	61	30.539
ENSCLAG00000016650	RAB5C	71	35.294	ENSCLAG00000017218	-	67	35.294
ENSCLAG00000016650	RAB5C	75	31.902	ENSCLAG00000005888	NRAS	85	31.902
ENSCLAG00000016650	RAB5C	89	43.590	ENSCLAG00000014766	RAB1A	95	43.590
ENSCLAG00000016650	RAB5C	90	40.500	ENSCLAG00000015766	RAB24	96	41.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016650	RAB5C	100	97.222	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSCLAG00000016650	RAB5C	99	88.372	ENSAPOG00000016864	rab5c	98	90.698	Acanthochromis_polyacanthus
ENSCLAG00000016650	RAB5C	100	97.222	ENSAMEG00000006003	RAB5C	100	97.222	Ailuropoda_melanoleuca
ENSCLAG00000016650	RAB5C	99	88.426	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSCLAG00000016650	RAB5C	99	88.426	ENSAOCG00000016614	rab5c	98	90.741	Amphiprion_ocellaris
ENSCLAG00000016650	RAB5C	97	88.152	ENSAPEG00000017868	-	97	90.521	Amphiprion_percula
ENSCLAG00000016650	RAB5C	100	88.991	ENSATEG00000001937	rab5c	100	90.367	Anabas_testudineus
ENSCLAG00000016650	RAB5C	94	98.529	ENSANAG00000025390	RAB5C	100	98.529	Aotus_nancymaae
ENSCLAG00000016650	RAB5C	95	88.517	ENSACLG00000008615	-	99	87.215	Astatotilapia_calliptera
ENSCLAG00000016650	RAB5C	99	87.500	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSCLAG00000016650	RAB5C	95	89.423	ENSAMXG00000037267	-	99	91.827	Astyanax_mexicanus
ENSCLAG00000016650	RAB5C	99	89.401	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSCLAG00000016650	RAB5C	100	98.148	ENSBTAG00000006982	RAB5C	100	98.148	Bos_taurus
ENSCLAG00000016650	RAB5C	99	77.209	WBGene00004268	rab-5	99	77.209	Caenorhabditis_elegans
ENSCLAG00000016650	RAB5C	100	97.685	ENSCAFG00000015629	RAB5C	100	97.685	Canis_familiaris
ENSCLAG00000016650	RAB5C	100	97.685	ENSCAFG00020013537	RAB5C	100	97.685	Canis_lupus_dingo
ENSCLAG00000016650	RAB5C	100	98.148	ENSCHIG00000012960	RAB5C	100	98.148	Capra_hircus
ENSCLAG00000016650	RAB5C	100	97.685	ENSTSYG00000030531	RAB5C	100	97.685	Carlito_syrichta
ENSCLAG00000016650	RAB5C	100	97.685	ENSCCAG00000025940	RAB5C	100	97.685	Cebus_capucinus
ENSCLAG00000016650	RAB5C	100	97.222	ENSCATG00000040873	RAB5C	100	97.222	Cercocebus_atys
ENSCLAG00000016650	RAB5C	82	98.315	ENSCHOG00000009886	RAB5C	100	98.315	Choloepus_hoffmanni
ENSCLAG00000016650	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSCLAG00000016650	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.951	Ciona_savignyi
ENSCLAG00000016650	RAB5C	100	97.222	ENSCGRG00001014226	Rab5c	100	97.222	Cricetulus_griseus_chok1gshd
ENSCLAG00000016650	RAB5C	100	97.222	ENSCGRG00000007534	Rab5c	100	97.222	Cricetulus_griseus_crigri
ENSCLAG00000016650	RAB5C	99	90.278	ENSCSEG00000017024	rab5c	98	90.278	Cynoglossus_semilaevis
ENSCLAG00000016650	RAB5C	99	88.426	ENSCVAG00000009550	rab5c	98	90.278	Cyprinodon_variegatus
ENSCLAG00000016650	RAB5C	100	96.759	ENSDNOG00000038853	RAB5C	100	96.759	Dasypus_novemcinctus
ENSCLAG00000016650	RAB5C	100	97.685	ENSDORG00000006819	Rab5c	100	97.685	Dipodomys_ordii
ENSCLAG00000016650	RAB5C	99	73.709	FBgn0014010	Rab5	95	73.709	Drosophila_melanogaster
ENSCLAG00000016650	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSCLAG00000016650	RAB5C	100	97.222	ENSEASG00005009281	RAB5C	100	97.222	Equus_asinus_asinus
ENSCLAG00000016650	RAB5C	100	97.685	ENSECAG00000025054	RAB5C	100	97.685	Equus_caballus
ENSCLAG00000016650	RAB5C	100	97.222	ENSEEUG00000002790	RAB5C	100	97.222	Erinaceus_europaeus
ENSCLAG00000016650	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSCLAG00000016650	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSCLAG00000016650	RAB5C	100	98.148	ENSFCAG00000002148	RAB5C	100	98.148	Felis_catus
ENSCLAG00000016650	RAB5C	100	97.222	ENSFDAG00000021541	RAB5C	100	97.222	Fukomys_damarensis
ENSCLAG00000016650	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSCLAG00000016650	RAB5C	99	88.426	ENSFHEG00000012117	rab5c	98	90.278	Fundulus_heteroclitus
ENSCLAG00000016650	RAB5C	78	87.574	ENSGMOG00000001876	-	98	87.574	Gadus_morhua
ENSCLAG00000016650	RAB5C	99	87.037	ENSGMOG00000015096	rab5c	98	89.815	Gadus_morhua
ENSCLAG00000016650	RAB5C	99	89.352	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSCLAG00000016650	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSCLAG00000016650	RAB5C	87	94.149	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSCLAG00000016650	RAB5C	100	97.222	ENSGGOG00000005472	RAB5C	100	97.222	Gorilla_gorilla
ENSCLAG00000016650	RAB5C	95	88.517	ENSHBUG00000006823	-	99	87.215	Haplochromis_burtoni
ENSCLAG00000016650	RAB5C	99	87.500	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSCLAG00000016650	RAB5C	100	95.833	ENSHGLG00000012067	RAB5C	100	95.833	Heterocephalus_glaber_female
ENSCLAG00000016650	RAB5C	96	81.517	ENSHCOG00000020238	-	100	79.545	Hippocampus_comes
ENSCLAG00000016650	RAB5C	99	88.940	ENSHCOG00000004662	rab5c	97	90.323	Hippocampus_comes
ENSCLAG00000016650	RAB5C	95	87.500	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSCLAG00000016650	RAB5C	100	96.759	ENSSTOG00000006620	RAB5C	100	96.759	Ictidomys_tridecemlineatus
ENSCLAG00000016650	RAB5C	100	97.222	ENSJJAG00000021181	Rab5c	100	97.222	Jaculus_jaculus
ENSCLAG00000016650	RAB5C	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSCLAG00000016650	RAB5C	99	87.963	ENSKMAG00000020038	rab5c	98	90.278	Kryptolebias_marmoratus
ENSCLAG00000016650	RAB5C	100	87.156	ENSLBEG00000010408	-	99	87.156	Labrus_bergylta
ENSCLAG00000016650	RAB5C	99	89.815	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSCLAG00000016650	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSCLAG00000016650	RAB5C	100	97.222	ENSMFAG00000039627	RAB5C	100	97.222	Macaca_fascicularis
ENSCLAG00000016650	RAB5C	100	97.222	ENSMNEG00000000355	RAB5C	100	97.222	Macaca_nemestrina
ENSCLAG00000016650	RAB5C	99	87.963	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSCLAG00000016650	RAB5C	99	87.558	ENSMAMG00000016207	-	99	87.558	Mastacembelus_armatus
ENSCLAG00000016650	RAB5C	99	87.500	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSCLAG00000016650	RAB5C	95	88.517	ENSMZEG00005021090	-	99	87.215	Maylandia_zebra
ENSCLAG00000016650	RAB5C	100	98.148	ENSMAUG00000015005	Rab5c	100	98.148	Mesocricetus_auratus
ENSCLAG00000016650	RAB5C	100	97.222	ENSMICG00000041608	RAB5C	100	97.222	Microcebus_murinus
ENSCLAG00000016650	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSCLAG00000016650	RAB5C	99	90.278	ENSMMOG00000020621	rab5c	98	90.278	Mola_mola
ENSCLAG00000016650	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSCLAG00000016650	RAB5C	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSCLAG00000016650	RAB5C	100	97.685	MGP_CAROLIEiJ_G0017184	Rab5c	100	97.685	Mus_caroli
ENSCLAG00000016650	RAB5C	100	97.685	ENSMUSG00000019173	Rab5c	100	97.685	Mus_musculus
ENSCLAG00000016650	RAB5C	100	97.685	MGP_PahariEiJ_G0018314	Rab5c	100	97.685	Mus_pahari
ENSCLAG00000016650	RAB5C	100	97.685	MGP_SPRETEiJ_G0018027	Rab5c	100	97.685	Mus_spretus
ENSCLAG00000016650	RAB5C	100	97.222	ENSMPUG00000010554	RAB5C	100	97.222	Mustela_putorius_furo
ENSCLAG00000016650	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSCLAG00000016650	RAB5C	99	88.426	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSCLAG00000016650	RAB5C	95	88.517	ENSNBRG00000016922	-	99	87.215	Neolamprologus_brichardi
ENSCLAG00000016650	RAB5C	82	92.135	ENSOPRG00000008255	RAB5C	100	92.135	Ochotona_princeps
ENSCLAG00000016650	RAB5C	100	99.074	ENSODEG00000017920	RAB5C	100	99.074	Octodon_degus
ENSCLAG00000016650	RAB5C	99	88.426	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSCLAG00000016650	RAB5C	100	87.615	ENSORLG00000003882	rab5c	100	88.991	Oryzias_latipes
ENSCLAG00000016650	RAB5C	100	88.532	ENSORLG00020008388	rab5c	100	88.532	Oryzias_latipes_hni
ENSCLAG00000016650	RAB5C	100	87.615	ENSORLG00015021900	rab5c	100	88.991	Oryzias_latipes_hsok
ENSCLAG00000016650	RAB5C	100	87.615	ENSOMEG00000023078	rab5c	100	88.991	Oryzias_melastigma
ENSCLAG00000016650	RAB5C	100	98.148	ENSOGAG00000009456	RAB5C	100	98.148	Otolemur_garnettii
ENSCLAG00000016650	RAB5C	100	98.148	ENSOARG00000018768	RAB5C	100	98.148	Ovis_aries
ENSCLAG00000016650	RAB5C	100	97.222	ENSPPAG00000037206	RAB5C	100	97.222	Pan_paniscus
ENSCLAG00000016650	RAB5C	100	98.148	ENSPPRG00000005745	RAB5C	100	98.148	Panthera_pardus
ENSCLAG00000016650	RAB5C	100	98.148	ENSPTIG00000008177	RAB5C	100	98.148	Panthera_tigris_altaica
ENSCLAG00000016650	RAB5C	100	97.222	ENSPTRG00000009194	RAB5C	100	97.222	Pan_troglodytes
ENSCLAG00000016650	RAB5C	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSCLAG00000016650	RAB5C	99	88.318	ENSPKIG00000001237	-	99	88.318	Paramormyrops_kingsleyae
ENSCLAG00000016650	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSCLAG00000016650	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSCLAG00000016650	RAB5C	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSCLAG00000016650	RAB5C	99	79.070	ENSPMAG00000001399	rab5c	100	79.070	Petromyzon_marinus
ENSCLAG00000016650	RAB5C	99	78.140	ENSPMAG00000007867	rab5c	100	78.140	Petromyzon_marinus
ENSCLAG00000016650	RAB5C	100	96.296	ENSPCIG00000020225	-	100	96.296	Phascolarctos_cinereus
ENSCLAG00000016650	RAB5C	99	89.352	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSCLAG00000016650	RAB5C	99	89.401	ENSPLAG00000016333	-	99	89.401	Poecilia_latipinna
ENSCLAG00000016650	RAB5C	97	88.208	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSCLAG00000016650	RAB5C	99	89.352	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSCLAG00000016650	RAB5C	87	92.063	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSCLAG00000016650	RAB5C	99	89.352	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSCLAG00000016650	RAB5C	100	97.222	ENSPPYG00000008398	RAB5C	100	97.222	Pongo_abelii
ENSCLAG00000016650	RAB5C	100	96.296	ENSPCAG00000016412	RAB5C	100	96.296	Procavia_capensis
ENSCLAG00000016650	RAB5C	100	96.296	ENSPCOG00000026327	RAB5C	100	96.296	Propithecus_coquereli
ENSCLAG00000016650	RAB5C	100	97.685	ENSPVAG00000003867	RAB5C	100	97.685	Pteropus_vampyrus
ENSCLAG00000016650	RAB5C	95	88.517	ENSPNYG00000015851	-	99	87.215	Pundamilia_nyererei
ENSCLAG00000016650	RAB5C	99	87.500	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSCLAG00000016650	RAB5C	99	90.783	ENSPNAG00000028138	rab5c	98	90.783	Pygocentrus_nattereri
ENSCLAG00000016650	RAB5C	96	87.619	ENSPNAG00000002218	-	99	90.000	Pygocentrus_nattereri
ENSCLAG00000016650	RAB5C	100	98.148	ENSRNOG00000018568	Rab5c	100	98.148	Rattus_norvegicus
ENSCLAG00000016650	RAB5C	100	97.222	ENSRBIG00000031376	RAB5C	100	97.222	Rhinopithecus_bieti
ENSCLAG00000016650	RAB5C	100	97.222	ENSRROG00000032895	RAB5C	100	97.222	Rhinopithecus_roxellana
ENSCLAG00000016650	RAB5C	100	97.685	ENSSBOG00000032552	-	100	97.685	Saimiri_boliviensis_boliviensis
ENSCLAG00000016650	RAB5C	100	96.759	ENSSHAG00000005267	-	100	96.759	Sarcophilus_harrisii
ENSCLAG00000016650	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSCLAG00000016650	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSCLAG00000016650	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSCLAG00000016650	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSCLAG00000016650	RAB5C	100	95.370	ENSSPUG00000012950	-	100	95.370	Sphenodon_punctatus
ENSCLAG00000016650	RAB5C	99	89.352	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSCLAG00000016650	RAB5C	100	98.148	ENSSSCG00000032467	RAB5C	100	98.148	Sus_scrofa
ENSCLAG00000016650	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSCLAG00000016650	RAB5C	96	90.431	ENSTNIG00000011711	rab5c	95	90.431	Tetraodon_nigroviridis
ENSCLAG00000016650	RAB5C	100	97.222	ENSTBEG00000007092	RAB5C	100	97.222	Tupaia_belangeri
ENSCLAG00000016650	RAB5C	100	97.222	ENSTTRG00000006673	RAB5C	100	97.222	Tursiops_truncatus
ENSCLAG00000016650	RAB5C	100	97.222	ENSUAMG00000024343	RAB5C	100	97.222	Ursus_americanus
ENSCLAG00000016650	RAB5C	100	97.222	ENSUMAG00000023270	RAB5C	100	97.222	Ursus_maritimus
ENSCLAG00000016650	RAB5C	99	88.889	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSCLAG00000016650	RAB5C	96	91.429	ENSXCOG00000006300	-	99	89.091	Xiphophorus_couchianus
ENSCLAG00000016650	RAB5C	99	89.352	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus
ENSCLAG00000016650	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus