EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000016710 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 66304 bases
Position: chrJH721911.1:17397096-17463399
Accession: 102007398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000024334	zf-C2H2_jaz	PF12171.8	2.1e-06	1	1
ENSCLAP00000024334	G-patch	PF01585.23	3.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024569	GPATCH8-201	4068	XM_013519264	ENSCLAP00000024334	1355 (aa)	XP_013374718	-

Gene Model

Click here to download ENSCLAG00000016710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016710	GPATCH8	72	56.329	ENSAMXG00000041683	gpatch8	72	57.753	Astyanax_mexicanus
ENSCLAG00000016710	GPATCH8	74	57.692	ENSCSEG00000021277	gpatch8	73	58.741	Cynoglossus_semilaevis
ENSCLAG00000016710	GPATCH8	70	46.037	ENSEBUG00000005749	gpatch8	69	47.751	Eptatretus_burgeri
ENSCLAG00000016710	GPATCH8	81	83.833	ENSHGLG00100010738	GPATCH8	99	83.833	Heterocephalus_glaber_male
ENSCLAG00000016710	GPATCH8	50	77.885	ENSLOCG00000012265	gpatch8	67	75.000	Lepisosteus_oculatus
ENSCLAG00000016710	GPATCH8	51	71.274	ENSLAFG00000032250	GPATCH8	58	71.071	Loxodonta_africana
ENSCLAG00000016710	GPATCH8	60	93.919	ENSMLUG00000013840	GPATCH8	95	94.558	Myotis_lucifugus
ENSCLAG00000016710	GPATCH8	94	81.280	ENSOPRG00000008816	GPATCH8	83	85.009	Ochotona_princeps
ENSCLAG00000016710	GPATCH8	100	84.023	ENSODEG00000018121	GPATCH8	99	83.512	Octodon_degus
ENSCLAG00000016710	GPATCH8	56	100.000	ENSPCAG00000004441	GPATCH8	71	100.000	Procavia_capensis
ENSCLAG00000016710	GPATCH8	72	89.441	ENSTBEG00000009486	GPATCH8	86	89.441	Tupaia_belangeri