EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000016852 (Gene tree)
Gene ID: 102020130
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 16131 bases
Position: chrJH721882.1:19240974-19257104
Accession: 102020130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000024542	DUF382	PF04037.13	1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024778	SF3B2-201	4054	XM_005384431	ENSCLAP00000024542	878 (aa)	XP_005384488	UPI00038F1717

Gene Model

Click here to download ENSCLAG00000016852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016852	SF3B2	100	98.064	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
ENSCLAG00000016852	SF3B2	95	69.070	ENSAPOG00000001974	sf3b2	82	73.585	Acanthochromis_polyacanthus
ENSCLAG00000016852	SF3B2	100	96.000	ENSAMEG00000017206	SF3B2	100	96.000	Ailuropoda_melanoleuca
ENSCLAG00000016852	SF3B2	97	67.657	ENSACIG00000000624	sf3b2	87	74.308	Amphilophus_citrinellus
ENSCLAG00000016852	SF3B2	97	69.422	ENSAOCG00000009207	sf3b2	86	73.896	Amphiprion_ocellaris
ENSCLAG00000016852	SF3B2	97	69.024	ENSAPEG00000002762	sf3b2	87	72.179	Amphiprion_percula
ENSCLAG00000016852	SF3B2	100	65.680	ENSACAG00000008615	SF3B2	100	66.077	Anolis_carolinensis
ENSCLAG00000016852	SF3B2	100	98.180	ENSANAG00000029120	SF3B2	100	98.180	Aotus_nancymaae
ENSCLAG00000016852	SF3B2	86	71.613	ENSACLG00000014771	sf3b2	87	73.595	Astatotilapia_calliptera
ENSCLAG00000016852	SF3B2	84	70.511	ENSAMXG00000007929	sf3b2	86	77.429	Astyanax_mexicanus
ENSCLAG00000016852	SF3B2	100	95.662	ENSBTAG00000002778	SF3B2	100	95.662	Bos_taurus
ENSCLAG00000016852	SF3B2	60	50.532	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSCLAG00000016852	SF3B2	100	98.294	ENSCJAG00000001656	SF3B2	100	98.294	Callithrix_jacchus
ENSCLAG00000016852	SF3B2	100	96.102	ENSCAFG00000013033	SF3B2	100	96.102	Canis_familiaris
ENSCLAG00000016852	SF3B2	100	96.102	ENSCAFG00020015382	SF3B2	100	96.102	Canis_lupus_dingo
ENSCLAG00000016852	SF3B2	100	95.768	ENSCHIG00000011211	SF3B2	100	95.768	Capra_hircus
ENSCLAG00000016852	SF3B2	100	98.178	ENSTSYG00000000959	SF3B2	100	98.178	Carlito_syrichta
ENSCLAG00000016852	SF3B2	61	100.000	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSCLAG00000016852	SF3B2	91	98.995	ENSCPOG00000008294	SF3B2	100	98.995	Cavia_porcellus
ENSCLAG00000016852	SF3B2	100	98.294	ENSCCAG00000035256	SF3B2	100	98.294	Cebus_capucinus
ENSCLAG00000016852	SF3B2	100	98.178	ENSCATG00000042240	SF3B2	100	98.178	Cercocebus_atys
ENSCLAG00000016852	SF3B2	100	96.313	ENSCSAG00000008121	SF3B2	100	96.313	Chlorocebus_sabaeus
ENSCLAG00000016852	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	77	91.237	Choloepus_hoffmanni
ENSCLAG00000016852	SF3B2	85	80.339	ENSCPBG00000022465	SF3B2	87	88.558	Chrysemys_picta_bellii
ENSCLAG00000016852	SF3B2	74	59.447	ENSCING00000005665	-	99	60.063	Ciona_intestinalis
ENSCLAG00000016852	SF3B2	71	60.502	ENSCSAVG00000002029	-	99	59.528	Ciona_savignyi
ENSCLAG00000016852	SF3B2	100	98.178	ENSCANG00000039680	SF3B2	100	98.178	Colobus_angolensis_palliatus
ENSCLAG00000016852	SF3B2	100	98.519	ENSCGRG00001015741	Sf3b2	100	98.519	Cricetulus_griseus_chok1gshd
ENSCLAG00000016852	SF3B2	100	98.519	ENSCGRG00000018110	Sf3b2	100	98.519	Cricetulus_griseus_crigri
ENSCLAG00000016852	SF3B2	75	74.551	ENSCSEG00000000230	sf3b2	78	78.549	Cynoglossus_semilaevis
ENSCLAG00000016852	SF3B2	97	68.525	ENSCVAG00000003357	sf3b2	85	74.536	Cyprinodon_variegatus
ENSCLAG00000016852	SF3B2	82	73.124	ENSDARG00000018049	sf3b2	86	73.913	Danio_rerio
ENSCLAG00000016852	SF3B2	100	94.432	ENSDNOG00000009484	SF3B2	100	96.621	Dasypus_novemcinctus
ENSCLAG00000016852	SF3B2	100	97.725	ENSDORG00000002495	Sf3b2	100	97.725	Dipodomys_ordii
ENSCLAG00000016852	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSCLAG00000016852	SF3B2	98	57.638	ENSEBUG00000013703	sf3b2	99	59.802	Eptatretus_burgeri
ENSCLAG00000016852	SF3B2	100	95.773	ENSEASG00005004508	SF3B2	100	95.773	Equus_asinus_asinus
ENSCLAG00000016852	SF3B2	100	95.773	ENSECAG00000024461	SF3B2	100	95.773	Equus_caballus
ENSCLAG00000016852	SF3B2	62	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSCLAG00000016852	SF3B2	97	65.649	ENSELUG00000005586	sf3b2	84	72.520	Esox_lucius
ENSCLAG00000016852	SF3B2	100	98.070	ENSFCAG00000013289	SF3B2	100	98.070	Felis_catus
ENSCLAG00000016852	SF3B2	80	70.522	ENSFALG00000014653	SF3B2	98	69.058	Ficedula_albicollis
ENSCLAG00000016852	SF3B2	100	98.867	ENSFDAG00000019806	SF3B2	100	98.867	Fukomys_damarensis
ENSCLAG00000016852	SF3B2	84	71.522	ENSFHEG00000020968	sf3b2	86	73.483	Fundulus_heteroclitus
ENSCLAG00000016852	SF3B2	74	78.168	ENSGMOG00000012131	sf3b2	96	80.818	Gadus_morhua
ENSCLAG00000016852	SF3B2	97	68.565	ENSGAFG00000001675	sf3b2	86	72.727	Gambusia_affinis
ENSCLAG00000016852	SF3B2	74	79.231	ENSGACG00000019012	sf3b2	96	80.159	Gasterosteus_aculeatus
ENSCLAG00000016852	SF3B2	100	78.038	ENSGAGG00000023916	SF3B2	86	86.078	Gopherus_agassizii
ENSCLAG00000016852	SF3B2	100	97.055	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSCLAG00000016852	SF3B2	86	71.742	ENSHBUG00000017349	sf3b2	87	73.595	Haplochromis_burtoni
ENSCLAG00000016852	SF3B2	100	99.658	ENSHGLG00000010807	SF3B2	100	99.658	Heterocephalus_glaber_female
ENSCLAG00000016852	SF3B2	100	99.658	ENSHGLG00100006361	SF3B2	100	99.658	Heterocephalus_glaber_male
ENSCLAG00000016852	SF3B2	97	65.411	ENSHCOG00000016203	sf3b2	97	65.222	Hippocampus_comes
ENSCLAG00000016852	SF3B2	97	65.203	ENSIPUG00000009383	sf3b2	83	71.640	Ictalurus_punctatus
ENSCLAG00000016852	SF3B2	100	98.975	ENSSTOG00000028892	SF3B2	100	98.975	Ictidomys_tridecemlineatus
ENSCLAG00000016852	SF3B2	100	98.297	ENSJJAG00000018193	Sf3b2	100	98.297	Jaculus_jaculus
ENSCLAG00000016852	SF3B2	60	87.970	ENSKMAG00000020181	sf3b2	86	72.716	Kryptolebias_marmoratus
ENSCLAG00000016852	SF3B2	97	68.993	ENSLBEG00000027739	sf3b2	88	79.467	Labrus_bergylta
ENSCLAG00000016852	SF3B2	79	81.034	ENSLACG00000010429	SF3B2	98	72.278	Latimeria_chalumnae
ENSCLAG00000016852	SF3B2	100	97.276	ENSLAFG00000002128	SF3B2	100	97.276	Loxodonta_africana
ENSCLAG00000016852	SF3B2	100	98.066	ENSMFAG00000003064	SF3B2	100	98.066	Macaca_fascicularis
ENSCLAG00000016852	SF3B2	100	93.736	ENSMMUG00000011743	SF3B2	100	93.736	Macaca_mulatta
ENSCLAG00000016852	SF3B2	100	96.836	ENSMNEG00000034437	SF3B2	100	96.836	Macaca_nemestrina
ENSCLAG00000016852	SF3B2	100	96.723	ENSMLEG00000029373	SF3B2	100	96.723	Mandrillus_leucophaeus
ENSCLAG00000016852	SF3B2	84	73.325	ENSMAMG00000014103	sf3b2	86	73.718	Mastacembelus_armatus
ENSCLAG00000016852	SF3B2	86	71.613	ENSMZEG00005020789	sf3b2	86	73.595	Maylandia_zebra
ENSCLAG00000016852	SF3B2	64	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSCLAG00000016852	SF3B2	100	92.531	ENSMICG00000016942	-	97	92.419	Microcebus_murinus
ENSCLAG00000016852	SF3B2	100	97.950	ENSMICG00000008565	-	100	97.950	Microcebus_murinus
ENSCLAG00000016852	SF3B2	100	98.405	ENSMOCG00000003136	Sf3b2	100	98.405	Microtus_ochrogaster
ENSCLAG00000016852	SF3B2	97	66.061	ENSMMOG00000012928	sf3b2	86	71.765	Mola_mola
ENSCLAG00000016852	SF3B2	72	88.031	ENSMODG00000025020	-	99	87.087	Monodelphis_domestica
ENSCLAG00000016852	SF3B2	85	90.993	ENSMODG00000008490	-	92	92.838	Monodelphis_domestica
ENSCLAG00000016852	SF3B2	86	70.443	ENSMALG00000015137	sf3b2	85	72.074	Monopterus_albus
ENSCLAG00000016852	SF3B2	100	97.608	MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.608	Mus_caroli
ENSCLAG00000016852	SF3B2	100	98.178	ENSMUSG00000024853	Sf3b2	100	98.178	Mus_musculus
ENSCLAG00000016852	SF3B2	100	98.178	MGP_PahariEiJ_G0014036	Sf3b2	100	98.178	Mus_pahari
ENSCLAG00000016852	SF3B2	100	98.064	MGP_SPRETEiJ_G0023453	Sf3b2	100	98.064	Mus_spretus
ENSCLAG00000016852	SF3B2	100	95.991	ENSMPUG00000011349	SF3B2	100	95.991	Mustela_putorius_furo
ENSCLAG00000016852	SF3B2	100	94.994	ENSMLUG00000011136	SF3B2	100	94.994	Myotis_lucifugus
ENSCLAG00000016852	SF3B2	100	98.633	ENSNGAG00000012103	Sf3b2	100	98.633	Nannospalax_galili
ENSCLAG00000016852	SF3B2	100	92.108	ENSNLEG00000006007	SF3B2	100	91.246	Nomascus_leucogenys
ENSCLAG00000016852	SF3B2	76	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
ENSCLAG00000016852	SF3B2	100	95.786	ENSODEG00000017764	SF3B2	100	95.786	Octodon_degus
ENSCLAG00000016852	SF3B2	97	67.120	ENSONIG00000013068	sf3b2	87	75.494	Oreochromis_niloticus
ENSCLAG00000016852	SF3B2	87	81.386	ENSOANG00000012482	SF3B2	97	81.600	Ornithorhynchus_anatinus
ENSCLAG00000016852	SF3B2	62	65.619	ENSOCUG00000024154	-	100	65.804	Oryctolagus_cuniculus
ENSCLAG00000016852	SF3B2	100	90.838	ENSOCUG00000015722	-	100	90.726	Oryctolagus_cuniculus
ENSCLAG00000016852	SF3B2	97	66.403	ENSORLG00000008235	sf3b2	85	73.553	Oryzias_latipes
ENSCLAG00000016852	SF3B2	97	66.403	ENSORLG00020005357	sf3b2	88	73.553	Oryzias_latipes_hni
ENSCLAG00000016852	SF3B2	97	67.698	ENSORLG00015022454	sf3b2	82	78.006	Oryzias_latipes_hsok
ENSCLAG00000016852	SF3B2	97	65.672	ENSOMEG00000017480	sf3b2	88	73.087	Oryzias_melastigma
ENSCLAG00000016852	SF3B2	100	90.056	ENSOGAG00000005799	SF3B2	100	90.615	Otolemur_garnettii
ENSCLAG00000016852	SF3B2	100	93.764	ENSOARG00000002125	SF3B2	100	95.393	Ovis_aries
ENSCLAG00000016852	SF3B2	100	96.201	ENSPPAG00000007359	SF3B2	100	96.201	Pan_paniscus
ENSCLAG00000016852	SF3B2	100	98.070	ENSPPRG00000013334	SF3B2	100	98.070	Panthera_pardus
ENSCLAG00000016852	SF3B2	100	97.957	ENSPTIG00000015022	SF3B2	100	97.957	Panthera_tigris_altaica
ENSCLAG00000016852	SF3B2	100	96.201	ENSPTRG00000003912	SF3B2	100	96.201	Pan_troglodytes
ENSCLAG00000016852	SF3B2	100	98.178	ENSPANG00000008593	SF3B2	100	98.178	Papio_anubis
ENSCLAG00000016852	SF3B2	97	66.854	ENSPKIG00000016576	sf3b2	86	80.222	Paramormyrops_kingsleyae
ENSCLAG00000016852	SF3B2	93	80.476	ENSPSIG00000003158	SF3B2	100	88.493	Pelodiscus_sinensis
ENSCLAG00000016852	SF3B2	84	66.886	ENSPMGG00000000819	sf3b2	81	68.370	Periophthalmus_magnuspinnatus
ENSCLAG00000016852	SF3B2	100	98.747	ENSPEMG00000015437	Sf3b2	100	98.747	Peromyscus_maniculatus_bairdii
ENSCLAG00000016852	SF3B2	93	83.558	ENSPEMG00000015451	-	100	83.436	Peromyscus_maniculatus_bairdii
ENSCLAG00000016852	SF3B2	85	90.451	ENSPCIG00000008381	SF3B2	100	89.778	Phascolarctos_cinereus
ENSCLAG00000016852	SF3B2	97	68.950	ENSPFOG00000002552	sf3b2	86	72.596	Poecilia_formosa
ENSCLAG00000016852	SF3B2	97	69.064	ENSPLAG00000001471	sf3b2	86	72.464	Poecilia_latipinna
ENSCLAG00000016852	SF3B2	97	67.580	ENSPMEG00000013180	sf3b2	86	73.913	Poecilia_mexicana
ENSCLAG00000016852	SF3B2	84	72.523	ENSPREG00000002665	sf3b2	86	73.587	Poecilia_reticulata
ENSCLAG00000016852	SF3B2	74	93.443	ENSPPYG00000003034	-	99	93.443	Pongo_abelii
ENSCLAG00000016852	SF3B2	100	94.989	ENSPCAG00000005129	SF3B2	100	94.989	Procavia_capensis
ENSCLAG00000016852	SF3B2	100	98.064	ENSPCOG00000025375	SF3B2	100	98.064	Propithecus_coquereli
ENSCLAG00000016852	SF3B2	54	99.561	ENSPVAG00000005466	-	80	99.561	Pteropus_vampyrus
ENSCLAG00000016852	SF3B2	56	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSCLAG00000016852	SF3B2	83	71.968	ENSPNYG00000023594	sf3b2	92	73.029	Pundamilia_nyererei
ENSCLAG00000016852	SF3B2	97	67.117	ENSPNAG00000001891	sf3b2	81	74.387	Pygocentrus_nattereri
ENSCLAG00000016852	SF3B2	100	98.178	ENSRNOG00000020412	Sf3b2	100	98.178	Rattus_norvegicus
ENSCLAG00000016852	SF3B2	100	98.064	ENSRBIG00000034065	SF3B2	100	98.064	Rhinopithecus_bieti
ENSCLAG00000016852	SF3B2	100	98.064	ENSRROG00000034496	SF3B2	100	98.064	Rhinopithecus_roxellana
ENSCLAG00000016852	SF3B2	100	93.466	ENSSBOG00000026337	SF3B2	100	94.020	Saimiri_boliviensis_boliviensis
ENSCLAG00000016852	SF3B2	85	85.509	ENSSHAG00000010933	-	100	83.628	Sarcophilus_harrisii
ENSCLAG00000016852	SF3B2	96	69.454	ENSSHAG00000018043	-	100	70.116	Sarcophilus_harrisii
ENSCLAG00000016852	SF3B2	97	66.408	ENSSFOG00015021125	sf3b2	97	67.797	Scleropages_formosus
ENSCLAG00000016852	SF3B2	97	67.299	ENSSMAG00000004079	sf3b2	88	73.377	Scophthalmus_maximus
ENSCLAG00000016852	SF3B2	60	87.666	ENSSDUG00000008499	sf3b2	85	70.801	Seriola_dumerili
ENSCLAG00000016852	SF3B2	60	88.235	ENSSLDG00000006838	sf3b2	86	75.163	Seriola_lalandi_dorsalis
ENSCLAG00000016852	SF3B2	52	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
ENSCLAG00000016852	SF3B2	100	80.846	ENSSPUG00000009198	SF3B2	85	84.043	Sphenodon_punctatus
ENSCLAG00000016852	SF3B2	97	66.851	ENSSPAG00000004406	sf3b2	86	73.384	Stegastes_partitus
ENSCLAG00000016852	SF3B2	100	95.434	ENSSSCG00000012957	SF3B2	100	95.434	Sus_scrofa
ENSCLAG00000016852	SF3B2	97	54.566	ENSTRUG00000007611	sf3b2	88	72.231	Takifugu_rubripes
ENSCLAG00000016852	SF3B2	86	69.895	ENSTNIG00000007441	sf3b2	88	69.344	Tetraodon_nigroviridis
ENSCLAG00000016852	SF3B2	91	95.349	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSCLAG00000016852	SF3B2	100	95.768	ENSTTRG00000014339	SF3B2	100	95.768	Tursiops_truncatus
ENSCLAG00000016852	SF3B2	100	94.216	ENSUAMG00000020754	SF3B2	99	95.360	Ursus_americanus
ENSCLAG00000016852	SF3B2	100	96.214	ENSUMAG00000010994	SF3B2	100	96.214	Ursus_maritimus
ENSCLAG00000016852	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	63	99.153	Vicugna_pacos
ENSCLAG00000016852	SF3B2	100	95.991	ENSVVUG00000027029	SF3B2	100	95.991	Vulpes_vulpes
ENSCLAG00000016852	SF3B2	87	71.263	ENSXETG00000008422	sf3b2	87	78.102	Xenopus_tropicalis
ENSCLAG00000016852	SF3B2	72	79.048	ENSXCOG00000008943	sf3b2	84	77.619	Xiphophorus_couchianus
ENSCLAG00000016852	SF3B2	60	87.736	ENSXMAG00000008467	sf3b2	86	71.953	Xiphophorus_maculatus