EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016920 (Gene tree)
Gene ID: 102019321
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 17741 bases
Position: chrJH721897.1:2813296-2831036
Accession: 102019321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000024638	zf-U1	PF06220.12	9.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024876	SNRPC-201	965	XM_013516970	ENSCLAP00000024638	159 (aa)	XP_013372424	UPI00001352E7

Gene Model

Click here to download ENSCLAG00000016920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016920	SNRPC	99	81.529	ENSCLAG00000010242	-	96	81.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016920	SNRPC	100	100.000	ENSG00000124562	SNRPC	100	100.000	Homo_sapiens
ENSCLAG00000016920	SNRPC	100	98.113	ENSAMEG00000000963	SNRPC	88	98.113	Ailuropoda_melanoleuca
ENSCLAG00000016920	SNRPC	99	96.815	ENSACAG00000015721	SNRPC	87	96.815	Anolis_carolinensis
ENSCLAG00000016920	SNRPC	100	99.371	ENSANAG00000007843	-	100	99.371	Aotus_nancymaae
ENSCLAG00000016920	SNRPC	100	100.000	ENSANAG00000019696	-	100	100.000	Aotus_nancymaae
ENSCLAG00000016920	SNRPC	100	89.308	ENSANAG00000019726	-	92	89.937	Aotus_nancymaae
ENSCLAG00000016920	SNRPC	100	87.421	ENSANAG00000021026	-	100	80.503	Aotus_nancymaae
ENSCLAG00000016920	SNRPC	100	76.101	ENSANAG00000021444	-	61	83.333	Aotus_nancymaae
ENSCLAG00000016920	SNRPC	99	91.772	ENSANAG00000020588	-	92	91.772	Aotus_nancymaae
ENSCLAG00000016920	SNRPC	100	95.597	ENSANAG00000019157	-	100	95.597	Aotus_nancymaae
ENSCLAG00000016920	SNRPC	100	84.906	ENSAMXG00000032641	snrpc	100	72.956	Astyanax_mexicanus
ENSCLAG00000016920	SNRPC	100	100.000	ENSBTAG00000024549	SNRPC	100	100.000	Bos_taurus
ENSCLAG00000016920	SNRPC	100	98.742	ENSCJAG00000043055	-	100	98.742	Callithrix_jacchus
ENSCLAG00000016920	SNRPC	100	97.484	ENSCJAG00000041822	-	100	97.484	Callithrix_jacchus
ENSCLAG00000016920	SNRPC	100	100.000	ENSCJAG00000015321	-	100	100.000	Callithrix_jacchus
ENSCLAG00000016920	SNRPC	74	100.000	ENSCAFG00000001231	-	93	100.000	Canis_familiaris
ENSCLAG00000016920	SNRPC	100	95.597	ENSCAFG00000031775	-	100	95.597	Canis_familiaris
ENSCLAG00000016920	SNRPC	100	78.616	ENSCAFG00000025525	-	100	78.616	Canis_familiaris
ENSCLAG00000016920	SNRPC	100	97.500	ENSCAFG00000028988	-	100	97.500	Canis_familiaris
ENSCLAG00000016920	SNRPC	100	78.652	ENSCAFG00020026577	-	100	84.831	Canis_lupus_dingo
ENSCLAG00000016920	SNRPC	99	88.535	ENSCAFG00020009944	-	90	88.535	Canis_lupus_dingo
ENSCLAG00000016920	SNRPC	100	95.597	ENSCAFG00020017383	-	100	95.597	Canis_lupus_dingo
ENSCLAG00000016920	SNRPC	100	100.000	ENSCAFG00020005945	-	100	100.000	Canis_lupus_dingo
ENSCLAG00000016920	SNRPC	100	96.226	ENSCAFG00020005758	-	100	96.226	Canis_lupus_dingo
ENSCLAG00000016920	SNRPC	100	72.327	ENSCHIG00000005039	-	100	71.069	Capra_hircus
ENSCLAG00000016920	SNRPC	100	99.371	ENSCHIG00000012087	-	100	99.371	Capra_hircus
ENSCLAG00000016920	SNRPC	100	100.000	ENSTSYG00000011216	-	100	100.000	Carlito_syrichta
ENSCLAG00000016920	SNRPC	99	89.241	ENSTSYG00000029745	-	62	94.309	Carlito_syrichta
ENSCLAG00000016920	SNRPC	100	83.019	ENSTSYG00000025721	-	100	76.101	Carlito_syrichta
ENSCLAG00000016920	SNRPC	89	100.000	ENSCAPG00000005161	SNRPC	100	100.000	Cavia_aperea
ENSCLAG00000016920	SNRPC	100	100.000	ENSCPOG00000008563	SNRPC	100	100.000	Cavia_porcellus
ENSCLAG00000016920	SNRPC	100	69.811	ENSCCAG00000028293	-	59	89.610	Cebus_capucinus
ENSCLAG00000016920	SNRPC	98	80.128	ENSCCAG00000022209	-	95	80.128	Cebus_capucinus
ENSCLAG00000016920	SNRPC	100	94.340	ENSCCAG00000036059	-	89	94.340	Cebus_capucinus
ENSCLAG00000016920	SNRPC	99	81.529	ENSCCAG00000026624	-	66	75.796	Cebus_capucinus
ENSCLAG00000016920	SNRPC	98	91.667	ENSCCAG00000022751	-	95	91.667	Cebus_capucinus
ENSCLAG00000016920	SNRPC	100	100.000	ENSCATG00000035787	SNRPC	100	100.000	Cercocebus_atys
ENSCLAG00000016920	SNRPC	100	89.326	ENSCSAG00000009821	SNRPC	100	89.326	Chlorocebus_sabaeus
ENSCLAG00000016920	SNRPC	100	81.132	ENSCHOG00000011439	SNRPC	88	82.166	Choloepus_hoffmanni
ENSCLAG00000016920	SNRPC	100	97.484	ENSCPBG00000027142	SNRPC	100	97.484	Chrysemys_picta_bellii
ENSCLAG00000016920	SNRPC	97	49.351	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSCLAG00000016920	SNRPC	100	100.000	ENSCANG00000028035	SNRPC	100	100.000	Colobus_angolensis_palliatus
ENSCLAG00000016920	SNRPC	100	87.421	ENSCGRG00001021483	-	100	85.535	Cricetulus_griseus_chok1gshd
ENSCLAG00000016920	SNRPC	100	99.371	ENSCGRG00001009011	-	100	99.371	Cricetulus_griseus_chok1gshd
ENSCLAG00000016920	SNRPC	100	97.484	ENSCGRG00000005005	Snrpc	100	97.484	Cricetulus_griseus_crigri
ENSCLAG00000016920	SNRPC	100	84.906	ENSDARG00000009871	snrpc	100	84.906	Danio_rerio
ENSCLAG00000016920	SNRPC	100	98.742	ENSDNOG00000034699	-	99	98.742	Dasypus_novemcinctus
ENSCLAG00000016920	SNRPC	75	99.160	ENSDNOG00000042403	-	94	99.160	Dasypus_novemcinctus
ENSCLAG00000016920	SNRPC	95	79.470	ENSDORG00000029823	-	56	96.104	Dipodomys_ordii
ENSCLAG00000016920	SNRPC	100	81.132	ENSDORG00000005955	Snrpc	66	80.255	Dipodomys_ordii
ENSCLAG00000016920	SNRPC	98	96.154	ENSETEG00000008268	-	100	96.154	Echinops_telfairi
ENSCLAG00000016920	SNRPC	52	95.181	ENSETEG00000008756	-	75	94.805	Echinops_telfairi
ENSCLAG00000016920	SNRPC	98	92.308	ENSETEG00000011265	-	100	92.308	Echinops_telfairi
ENSCLAG00000016920	SNRPC	100	100.000	ENSEASG00005021007	SNRPC	100	100.000	Equus_asinus_asinus
ENSCLAG00000016920	SNRPC	100	100.000	ENSECAG00000026848	SNRPC	100	100.000	Equus_caballus
ENSCLAG00000016920	SNRPC	99	79.747	ENSEEUG00000014633	SNRPC	90	79.747	Erinaceus_europaeus
ENSCLAG00000016920	SNRPC	100	78.616	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSCLAG00000016920	SNRPC	100	100.000	ENSFCAG00000044077	-	100	100.000	Felis_catus
ENSCLAG00000016920	SNRPC	100	93.082	ENSFCAG00000031775	-	88	93.082	Felis_catus
ENSCLAG00000016920	SNRPC	100	98.742	ENSFALG00000003756	SNRPC	100	98.742	Ficedula_albicollis
ENSCLAG00000016920	SNRPC	100	100.000	ENSFDAG00000018111	SNRPC	100	100.000	Fukomys_damarensis
ENSCLAG00000016920	SNRPC	100	96.875	ENSGALG00000002773	SNRPC	100	96.875	Gallus_gallus
ENSCLAG00000016920	SNRPC	100	97.484	ENSGAGG00000003063	SNRPC	100	97.484	Gopherus_agassizii
ENSCLAG00000016920	SNRPC	100	100.000	ENSGGOG00000012499	SNRPC	100	100.000	Gorilla_gorilla
ENSCLAG00000016920	SNRPC	81	75.194	ENSHGLG00000005871	-	100	75.472	Heterocephalus_glaber_female
ENSCLAG00000016920	SNRPC	100	100.000	ENSHGLG00000013981	SNRPC	100	100.000	Heterocephalus_glaber_female
ENSCLAG00000016920	SNRPC	100	81.132	ENSHGLG00000017741	-	100	78.616	Heterocephalus_glaber_female
ENSCLAG00000016920	SNRPC	100	100.000	ENSHGLG00100009478	SNRPC	100	100.000	Heterocephalus_glaber_male
ENSCLAG00000016920	SNRPC	100	94.969	ENSHGLG00100017764	-	100	94.969	Heterocephalus_glaber_male
ENSCLAG00000016920	SNRPC	100	81.132	ENSHGLG00100010786	-	100	78.616	Heterocephalus_glaber_male
ENSCLAG00000016920	SNRPC	100	85.535	ENSIPUG00000024851	snrpc	100	85.535	Ictalurus_punctatus
ENSCLAG00000016920	SNRPC	100	100.000	ENSSTOG00000013786	SNRPC	100	100.000	Ictidomys_tridecemlineatus
ENSCLAG00000016920	SNRPC	100	99.371	ENSJJAG00000021741	Snrpc	100	99.371	Jaculus_jaculus
ENSCLAG00000016920	SNRPC	100	88.125	ENSLACG00000013753	SNRPC	88	91.139	Latimeria_chalumnae
ENSCLAG00000016920	SNRPC	100	100.000	ENSLAFG00000013534	SNRPC	100	100.000	Loxodonta_africana
ENSCLAG00000016920	SNRPC	100	99.371	ENSMFAG00000030525	-	100	99.371	Macaca_fascicularis
ENSCLAG00000016920	SNRPC	100	100.000	ENSMFAG00000031764	-	100	100.000	Macaca_fascicularis
ENSCLAG00000016920	SNRPC	100	98.742	ENSMMUG00000000869	-	97	98.742	Macaca_mulatta
ENSCLAG00000016920	SNRPC	100	89.937	ENSMMUG00000045425	-	100	89.937	Macaca_mulatta
ENSCLAG00000016920	SNRPC	100	98.742	ENSMMUG00000039415	-	100	98.742	Macaca_mulatta
ENSCLAG00000016920	SNRPC	100	100.000	ENSMNEG00000032731	SNRPC	100	100.000	Macaca_nemestrina
ENSCLAG00000016920	SNRPC	100	100.000	ENSMLEG00000033916	-	100	100.000	Mandrillus_leucophaeus
ENSCLAG00000016920	SNRPC	97	90.968	ENSMLEG00000040224	-	89	90.968	Mandrillus_leucophaeus
ENSCLAG00000016920	SNRPC	100	96.855	ENSMGAG00000006054	SNRPC	100	96.855	Meleagris_gallopavo
ENSCLAG00000016920	SNRPC	100	84.906	ENSMICG00000036552	-	87	80.128	Microcebus_murinus
ENSCLAG00000016920	SNRPC	100	99.371	ENSMICG00000007339	-	100	99.371	Microcebus_murinus
ENSCLAG00000016920	SNRPC	100	99.371	ENSMICG00000032183	-	100	99.371	Microcebus_murinus
ENSCLAG00000016920	SNRPC	100	88.050	ENSMICG00000009130	-	100	88.679	Microcebus_murinus
ENSCLAG00000016920	SNRPC	100	99.371	ENSMOCG00000017609	Snrpc	100	99.371	Microtus_ochrogaster
ENSCLAG00000016920	SNRPC	100	98.742	ENSMODG00000013904	-	100	98.742	Monodelphis_domestica
ENSCLAG00000016920	SNRPC	100	99.371	MGP_CAROLIEiJ_G0021308	Snrpc	100	99.371	Mus_caroli
ENSCLAG00000016920	SNRPC	100	99.371	ENSMUSG00000024217	Snrpc	100	99.371	Mus_musculus
ENSCLAG00000016920	SNRPC	74	99.153	MGP_SPRETEiJ_G0022221	-	98	99.153	Mus_spretus
ENSCLAG00000016920	SNRPC	100	98.113	ENSMPUG00000003210	SNRPC	100	98.113	Mustela_putorius_furo
ENSCLAG00000016920	SNRPC	100	98.113	ENSMLUG00000002488	SNRPC	100	98.113	Myotis_lucifugus
ENSCLAG00000016920	SNRPC	100	99.371	ENSNGAG00000019686	Snrpc	100	99.371	Nannospalax_galili
ENSCLAG00000016920	SNRPC	100	100.000	ENSNLEG00000034810	SNRPC	100	100.000	Nomascus_leucogenys
ENSCLAG00000016920	SNRPC	89	99.296	ENSMEUG00000009300	SNRPC	100	99.296	Notamacropus_eugenii
ENSCLAG00000016920	SNRPC	100	98.742	ENSODEG00000019633	-	100	98.742	Octodon_degus
ENSCLAG00000016920	SNRPC	77	94.309	ENSODEG00000006008	-	88	94.309	Octodon_degus
ENSCLAG00000016920	SNRPC	100	100.000	ENSODEG00000017080	-	100	100.000	Octodon_degus
ENSCLAG00000016920	SNRPC	100	100.000	ENSODEG00000020370	-	100	100.000	Octodon_degus
ENSCLAG00000016920	SNRPC	100	100.000	ENSODEG00000018985	-	100	100.000	Octodon_degus
ENSCLAG00000016920	SNRPC	100	99.371	ENSODEG00000020201	-	100	99.371	Octodon_degus
ENSCLAG00000016920	SNRPC	91	95.270	ENSOANG00000003405	SNRPC	100	95.270	Ornithorhynchus_anatinus
ENSCLAG00000016920	SNRPC	100	97.484	ENSOCUG00000023292	-	100	97.484	Oryctolagus_cuniculus
ENSCLAG00000016920	SNRPC	100	100.000	ENSOCUG00000026668	-	100	100.000	Oryctolagus_cuniculus
ENSCLAG00000016920	SNRPC	100	98.742	ENSOCUG00000026430	-	99	98.742	Oryctolagus_cuniculus
ENSCLAG00000016920	SNRPC	97	84.416	ENSOGAG00000028405	-	99	81.818	Otolemur_garnettii
ENSCLAG00000016920	SNRPC	100	98.113	ENSOGAG00000026269	-	100	98.113	Otolemur_garnettii
ENSCLAG00000016920	SNRPC	99	99.363	ENSOGAG00000008755	-	88	99.363	Otolemur_garnettii
ENSCLAG00000016920	SNRPC	100	100.000	ENSOARG00000010823	SNRPC	100	100.000	Ovis_aries
ENSCLAG00000016920	SNRPC	100	100.000	ENSPPAG00000043871	SNRPC	100	100.000	Pan_paniscus
ENSCLAG00000016920	SNRPC	96	60.390	ENSPPRG00000016017	-	86	54.902	Panthera_pardus
ENSCLAG00000016920	SNRPC	100	100.000	ENSPPRG00000008647	-	100	100.000	Panthera_pardus
ENSCLAG00000016920	SNRPC	100	100.000	ENSPTIG00000021867	-	100	100.000	Panthera_tigris_altaica
ENSCLAG00000016920	SNRPC	97	60.000	ENSPTIG00000013329	-	50	83.117	Panthera_tigris_altaica
ENSCLAG00000016920	SNRPC	100	100.000	ENSPTRG00000018070	SNRPC	100	100.000	Pan_troglodytes
ENSCLAG00000016920	SNRPC	100	100.000	ENSPANG00000022802	-	100	100.000	Papio_anubis
ENSCLAG00000016920	SNRPC	100	88.679	ENSPANG00000018228	-	94	88.679	Papio_anubis
ENSCLAG00000016920	SNRPC	99	96.178	ENSPSIG00000004876	SNRPC	77	96.178	Pelodiscus_sinensis
ENSCLAG00000016920	SNRPC	100	99.371	ENSPEMG00000010773	Snrpc	100	99.371	Peromyscus_maniculatus_bairdii
ENSCLAG00000016920	SNRPC	100	87.421	ENSPEMG00000002763	-	100	85.535	Peromyscus_maniculatus_bairdii
ENSCLAG00000016920	SNRPC	52	100.000	ENSPPYG00000029902	-	84	100.000	Pongo_abelii
ENSCLAG00000016920	SNRPC	99	99.363	ENSPCAG00000016885	SNRPC	90	99.363	Procavia_capensis
ENSCLAG00000016920	SNRPC	100	100.000	ENSPCOG00000004904	SNRPC	100	100.000	Propithecus_coquereli
ENSCLAG00000016920	SNRPC	99	98.726	ENSPVAG00000015597	SNRPC	87	98.726	Pteropus_vampyrus
ENSCLAG00000016920	SNRPC	100	99.371	ENSRNOG00000000493	Snrpc	100	99.371	Rattus_norvegicus
ENSCLAG00000016920	SNRPC	100	99.371	ENSRBIG00000022998	-	100	99.371	Rhinopithecus_bieti
ENSCLAG00000016920	SNRPC	100	100.000	ENSRBIG00000037567	-	100	100.000	Rhinopithecus_bieti
ENSCLAG00000016920	SNRPC	100	89.308	ENSRBIG00000036353	-	83	89.308	Rhinopithecus_bieti
ENSCLAG00000016920	SNRPC	100	99.371	ENSRBIG00000014819	-	100	99.371	Rhinopithecus_bieti
ENSCLAG00000016920	SNRPC	100	100.000	ENSRROG00000041300	SNRPC	100	100.000	Rhinopithecus_roxellana
ENSCLAG00000016920	SNRPC	98	81.410	ENSSBOG00000032882	-	93	81.410	Saimiri_boliviensis_boliviensis
ENSCLAG00000016920	SNRPC	95	82.781	ENSSBOG00000032361	-	66	81.250	Saimiri_boliviensis_boliviensis
ENSCLAG00000016920	SNRPC	98	82.692	ENSSBOG00000023189	-	91	82.692	Saimiri_boliviensis_boliviensis
ENSCLAG00000016920	SNRPC	100	100.000	ENSSBOG00000031528	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000016920	SNRPC	99	98.726	ENSSHAG00000000945	-	87	98.726	Sarcophilus_harrisii
ENSCLAG00000016920	SNRPC	100	81.132	ENSSFOG00015019150	snrpc	100	81.132	Scleropages_formosus
ENSCLAG00000016920	SNRPC	100	76.101	ENSSARG00000008970	SNRPC	89	76.101	Sorex_araneus
ENSCLAG00000016920	SNRPC	100	98.113	ENSSPUG00000002502	SNRPC	100	98.113	Sphenodon_punctatus
ENSCLAG00000016920	SNRPC	100	100.000	ENSSSCG00000001531	SNRPC	100	100.000	Sus_scrofa
ENSCLAG00000016920	SNRPC	100	97.484	ENSTGUG00000001773	SNRPC	100	97.484	Taeniopygia_guttata
ENSCLAG00000016920	SNRPC	98	73.718	ENSTBEG00000015356	-	68	91.667	Tupaia_belangeri
ENSCLAG00000016920	SNRPC	89	72.535	ENSTBEG00000016759	-	79	72.535	Tupaia_belangeri
ENSCLAG00000016920	SNRPC	98	92.308	ENSTBEG00000013022	-	100	92.308	Tupaia_belangeri
ENSCLAG00000016920	SNRPC	100	98.113	ENSTTRG00000007827	SNRPC	87	98.113	Tursiops_truncatus
ENSCLAG00000016920	SNRPC	75	99.160	ENSUAMG00000014125	SNRPC	80	99.160	Ursus_americanus
ENSCLAG00000016920	SNRPC	100	89.326	ENSUMAG00000010869	SNRPC	100	89.326	Ursus_maritimus
ENSCLAG00000016920	SNRPC	89	74.648	ENSVPAG00000003106	SNRPC	79	74.648	Vicugna_pacos
ENSCLAG00000016920	SNRPC	97	94.805	ENSVVUG00000010467	-	87	94.872	Vulpes_vulpes
ENSCLAG00000016920	SNRPC	100	98.742	ENSVVUG00000021947	-	100	98.742	Vulpes_vulpes
ENSCLAG00000016920	SNRPC	100	89.937	ENSXETG00000024721	snrpc	100	89.937	Xenopus_tropicalis