EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000016942 (Gene tree)
Gene ID: 102007325
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 162470 bases
Position: chrJH721873.1:25886077-26048546
Accession: 102007325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000024675	Ago_hook	PF10427.9	7.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000024913	TNRC6B-201	5421	XM_005379308	ENSCLAP00000024675	1806 (aa)	XP_005379365	-

Gene Model

Click here to download ENSCLAG00000016942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000016942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000016942	TNRC6B	98	37.236	ENSCLAG00000010217	TNRC6A	96	36.730
ENSCLAG00000016942	TNRC6B	96	35.449	ENSCLAG00000011139	TNRC6C	98	34.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000016942	TNRC6B	98	93.576	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSCLAG00000016942	TNRC6B	99	91.321	ENSAMEG00000011025	TNRC6B	100	90.538	Ailuropoda_melanoleuca
ENSCLAG00000016942	TNRC6B	96	84.994	ENSAPLG00000009347	TNRC6B	99	84.593	Anas_platyrhynchos
ENSCLAG00000016942	TNRC6B	97	72.774	ENSACAG00000007281	TNRC6B	98	73.333	Anolis_carolinensis
ENSCLAG00000016942	TNRC6B	98	95.601	ENSANAG00000035042	TNRC6B	100	96.702	Aotus_nancymaae
ENSCLAG00000016942	TNRC6B	83	47.760	ENSAMXG00000008707	tnrc6b	82	46.140	Astyanax_mexicanus
ENSCLAG00000016942	TNRC6B	98	94.438	ENSBTAG00000021076	TNRC6B	99	94.633	Bos_taurus
ENSCLAG00000016942	TNRC6B	97	96.202	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSCLAG00000016942	TNRC6B	96	96.402	ENSCAFG00000001255	TNRC6B	100	93.483	Canis_familiaris
ENSCLAG00000016942	TNRC6B	99	96.988	ENSCAFG00020002189	TNRC6B	99	96.988	Canis_lupus_dingo
ENSCLAG00000016942	TNRC6B	99	94.376	ENSCHIG00000003491	TNRC6B	100	94.655	Capra_hircus
ENSCLAG00000016942	TNRC6B	97	96.034	ENSTSYG00000011836	TNRC6B	100	96.034	Carlito_syrichta
ENSCLAG00000016942	TNRC6B	100	98.673	ENSCPOG00000005705	TNRC6B	100	98.673	Cavia_porcellus
ENSCLAG00000016942	TNRC6B	97	95.529	ENSCCAG00000019912	TNRC6B	99	95.529	Cebus_capucinus
ENSCLAG00000016942	TNRC6B	96	96.963	ENSCATG00000029291	TNRC6B	99	96.963	Cercocebus_atys
ENSCLAG00000016942	TNRC6B	97	92.490	ENSCSAG00000006021	TNRC6B	99	92.490	Chlorocebus_sabaeus
ENSCLAG00000016942	TNRC6B	89	84.991	ENSCPBG00000022932	TNRC6B	99	84.753	Chrysemys_picta_bellii
ENSCLAG00000016942	TNRC6B	97	96.204	ENSCANG00000030776	TNRC6B	100	96.353	Colobus_angolensis_palliatus
ENSCLAG00000016942	TNRC6B	96	95.189	ENSCGRG00001020166	Tnrc6b	99	95.074	Cricetulus_griseus_chok1gshd
ENSCLAG00000016942	TNRC6B	100	95.477	ENSCGRG00000016696	Tnrc6b	99	95.130	Cricetulus_griseus_crigri
ENSCLAG00000016942	TNRC6B	100	94.994	ENSDNOG00000012744	TNRC6B	100	95.045	Dasypus_novemcinctus
ENSCLAG00000016942	TNRC6B	100	96.911	ENSDORG00000003386	Tnrc6b	100	96.911	Dipodomys_ordii
ENSCLAG00000016942	TNRC6B	97	84.333	ENSETEG00000006570	TNRC6B	99	84.842	Echinops_telfairi
ENSCLAG00000016942	TNRC6B	100	96.790	ENSEASG00005005306	TNRC6B	100	96.790	Equus_asinus_asinus
ENSCLAG00000016942	TNRC6B	100	96.863	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSCLAG00000016942	TNRC6B	55	97.070	ENSEEUG00000008690	-	58	97.070	Erinaceus_europaeus
ENSCLAG00000016942	TNRC6B	100	96.264	ENSFCAG00000004791	TNRC6B	100	96.264	Felis_catus
ENSCLAG00000016942	TNRC6B	94	88.059	ENSFALG00000012195	TNRC6B	100	87.882	Ficedula_albicollis
ENSCLAG00000016942	TNRC6B	100	98.397	ENSFDAG00000021368	TNRC6B	100	98.397	Fukomys_damarensis
ENSCLAG00000016942	TNRC6B	97	88.302	ENSGALG00000012050	TNRC6B	97	88.381	Gallus_gallus
ENSCLAG00000016942	TNRC6B	97	87.683	ENSGAGG00000025188	TNRC6B	98	87.345	Gopherus_agassizii
ENSCLAG00000016942	TNRC6B	97	96.701	ENSGGOG00000008444	TNRC6B	100	96.820	Gorilla_gorilla
ENSCLAG00000016942	TNRC6B	100	98.505	ENSHGLG00000009306	TNRC6B	100	98.505	Heterocephalus_glaber_female
ENSCLAG00000016942	TNRC6B	100	98.068	ENSHGLG00100018108	TNRC6B	100	98.489	Heterocephalus_glaber_male
ENSCLAG00000016942	TNRC6B	77	44.603	ENSIPUG00000001515	tnrc6b	91	46.148	Ictalurus_punctatus
ENSCLAG00000016942	TNRC6B	100	97.077	ENSSTOG00000008927	TNRC6B	100	97.077	Ictidomys_tridecemlineatus
ENSCLAG00000016942	TNRC6B	100	95.033	ENSJJAG00000015779	Tnrc6b	100	94.923	Jaculus_jaculus
ENSCLAG00000016942	TNRC6B	98	61.354	ENSLACG00000000628	-	98	61.693	Latimeria_chalumnae
ENSCLAG00000016942	TNRC6B	76	95.788	ENSLAFG00000014473	TNRC6B	99	95.788	Loxodonta_africana
ENSCLAG00000016942	TNRC6B	97	97.023	ENSMFAG00000003862	TNRC6B	99	97.077	Macaca_fascicularis
ENSCLAG00000016942	TNRC6B	100	96.920	ENSMMUG00000021345	TNRC6B	100	96.588	Macaca_mulatta
ENSCLAG00000016942	TNRC6B	97	96.966	ENSMNEG00000042745	TNRC6B	100	96.780	Macaca_nemestrina
ENSCLAG00000016942	TNRC6B	96	97.077	ENSMLEG00000041780	TNRC6B	100	96.588	Mandrillus_leucophaeus
ENSCLAG00000016942	TNRC6B	98	85.008	ENSMGAG00000012333	TNRC6B	99	90.741	Meleagris_gallopavo
ENSCLAG00000016942	TNRC6B	100	94.208	ENSMAUG00000016123	Tnrc6b	98	95.300	Mesocricetus_auratus
ENSCLAG00000016942	TNRC6B	99	95.616	ENSMICG00000014056	TNRC6B	100	96.778	Microcebus_murinus
ENSCLAG00000016942	TNRC6B	97	96.000	ENSMOCG00000020334	Tnrc6b	100	96.000	Microtus_ochrogaster
ENSCLAG00000016942	TNRC6B	100	95.532	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	95.532	Mus_caroli
ENSCLAG00000016942	TNRC6B	100	95.477	ENSMUSG00000047888	Tnrc6b	100	95.477	Mus_musculus
ENSCLAG00000016942	TNRC6B	100	95.309	MGP_PahariEiJ_G0020045	Tnrc6b	100	95.309	Mus_pahari
ENSCLAG00000016942	TNRC6B	100	95.698	MGP_SPRETEiJ_G0020941	Tnrc6b	100	95.698	Mus_spretus
ENSCLAG00000016942	TNRC6B	95	97.148	ENSMPUG00000016442	TNRC6B	99	86.413	Mustela_putorius_furo
ENSCLAG00000016942	TNRC6B	97	90.471	ENSMLUG00000008765	TNRC6B	99	89.368	Myotis_lucifugus
ENSCLAG00000016942	TNRC6B	100	96.309	ENSNGAG00000021294	Tnrc6b	100	96.309	Nannospalax_galili
ENSCLAG00000016942	TNRC6B	87	95.446	ENSNLEG00000015311	TNRC6B	100	97.055	Nomascus_leucogenys
ENSCLAG00000016942	TNRC6B	91	86.594	ENSOPRG00000012054	TNRC6B	88	91.703	Ochotona_princeps
ENSCLAG00000016942	TNRC6B	100	99.228	ENSODEG00000013146	TNRC6B	100	99.228	Octodon_degus
ENSCLAG00000016942	TNRC6B	100	95.212	ENSOCUG00000016128	TNRC6B	100	95.047	Oryctolagus_cuniculus
ENSCLAG00000016942	TNRC6B	98	91.852	ENSOGAG00000011096	TNRC6B	99	90.953	Otolemur_garnettii
ENSCLAG00000016942	TNRC6B	100	94.521	ENSOARG00000017238	TNRC6B	100	94.521	Ovis_aries
ENSCLAG00000016942	TNRC6B	97	96.540	ENSPPAG00000028514	TNRC6B	100	96.462	Pan_paniscus
ENSCLAG00000016942	TNRC6B	97	92.599	ENSPPRG00000017741	TNRC6B	100	96.475	Panthera_pardus
ENSCLAG00000016942	TNRC6B	97	87.944	ENSPTIG00000022064	TNRC6B	98	89.673	Panthera_tigris_altaica
ENSCLAG00000016942	TNRC6B	96	97.248	ENSPTRG00000047826	TNRC6B	100	96.820	Pan_troglodytes
ENSCLAG00000016942	TNRC6B	96	87.143	ENSPANG00000009271	TNRC6B	99	95.726	Papio_anubis
ENSCLAG00000016942	TNRC6B	97	87.845	ENSPSIG00000005318	TNRC6B	99	87.451	Pelodiscus_sinensis
ENSCLAG00000016942	TNRC6B	100	95.702	ENSPEMG00000011403	Tnrc6b	100	95.702	Peromyscus_maniculatus_bairdii
ENSCLAG00000016942	TNRC6B	97	86.201	ENSPCIG00000020347	TNRC6B	99	86.144	Phascolarctos_cinereus
ENSCLAG00000016942	TNRC6B	93	38.967	ENSPFOG00000006033	-	95	42.877	Poecilia_formosa
ENSCLAG00000016942	TNRC6B	97	91.037	ENSPPYG00000011849	TNRC6B	99	94.157	Pongo_abelii
ENSCLAG00000016942	TNRC6B	77	92.208	ENSPCAG00000008739	TNRC6B	77	92.150	Procavia_capensis
ENSCLAG00000016942	TNRC6B	99	96.038	ENSPCOG00000020790	TNRC6B	100	96.820	Propithecus_coquereli
ENSCLAG00000016942	TNRC6B	93	96.581	ENSPVAG00000004975	TNRC6B	94	96.581	Pteropus_vampyrus
ENSCLAG00000016942	TNRC6B	63	50.616	ENSPNAG00000011713	tnrc6b	71	46.892	Pygocentrus_nattereri
ENSCLAG00000016942	TNRC6B	100	94.454	ENSRNOG00000024907	Tnrc6b	100	94.289	Rattus_norvegicus
ENSCLAG00000016942	TNRC6B	97	95.973	ENSRBIG00000035576	TNRC6B	99	96.353	Rhinopithecus_bieti
ENSCLAG00000016942	TNRC6B	98	95.817	ENSRROG00000031135	TNRC6B	100	96.554	Rhinopithecus_roxellana
ENSCLAG00000016942	TNRC6B	98	93.277	ENSSBOG00000029743	TNRC6B	100	94.124	Saimiri_boliviensis_boliviensis
ENSCLAG00000016942	TNRC6B	97	82.388	ENSSHAG00000009692	TNRC6B	99	81.542	Sarcophilus_harrisii
ENSCLAG00000016942	TNRC6B	65	85.185	ENSSARG00000007971	-	70	84.746	Sorex_araneus
ENSCLAG00000016942	TNRC6B	100	96.037	ENSSSCG00000000078	TNRC6B	99	95.899	Sus_scrofa
ENSCLAG00000016942	TNRC6B	90	81.565	ENSTGUG00000010138	-	98	83.088	Taeniopygia_guttata
ENSCLAG00000016942	TNRC6B	100	90.094	ENSTTRG00000011465	TNRC6B	100	90.204	Tursiops_truncatus
ENSCLAG00000016942	TNRC6B	100	94.798	ENSUAMG00000007174	TNRC6B	99	95.302	Ursus_americanus
ENSCLAG00000016942	TNRC6B	97	96.213	ENSUMAG00000014336	TNRC6B	100	96.460	Ursus_maritimus
ENSCLAG00000016942	TNRC6B	68	90.688	ENSVPAG00000001467	TNRC6B	75	89.474	Vicugna_pacos
ENSCLAG00000016942	TNRC6B	100	96.478	ENSVVUG00000007064	TNRC6B	100	96.435	Vulpes_vulpes