EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000017067 (Gene tree)
Gene ID: 106146269
Gene Symbol: LSM11
Alias: FLJ38273
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 8518 bases
Position: chrJH721868.1:11870524-11879041
Accession: 106146269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000024864	LSM	PF01423.22	6.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000025104	LSM11-201	6383	XM_013508827	ENSCLAP00000024864	233 (aa)	XP_013364281	-

Gene Model

Click here to download ENSCLAG00000017067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017067	LSM11	90	98.571	ENSCAPG00000009739	LSM11	100	98.571	Cavia_aperea
ENSCLAG00000017067	LSM11	91	97.183	ENSCPOG00000000906	LSM11	100	97.183	Cavia_porcellus
ENSCLAG00000017067	LSM11	90	93.810	ENSCHOG00000010946	LSM11	100	93.810	Choloepus_hoffmanni
ENSCLAG00000017067	LSM11	90	98.095	ENSCANG00000040781	LSM11	100	98.095	Colobus_angolensis_palliatus
ENSCLAG00000017067	LSM11	92	97.674	ENSCGRG00000000197	Lsm11	97	97.674	Cricetulus_griseus_crigri
ENSCLAG00000017067	LSM11	88	40.488	ENSCSEG00000019951	lsm11	50	41.463	Cynoglossus_semilaevis
ENSCLAG00000017067	LSM11	90	97.143	ENSEEUG00000010814	LSM11	100	97.143	Erinaceus_europaeus
ENSCLAG00000017067	LSM11	90	97.619	ENSMLEG00000027420	LSM11	100	97.619	Mandrillus_leucophaeus
ENSCLAG00000017067	LSM11	91	39.810	ENSMMOG00000009365	lsm11	51	39.336	Mola_mola
ENSCLAG00000017067	LSM11	94	72.018	ENSMLUG00000015930	LSM11	100	72.018	Myotis_lucifugus
ENSCLAG00000017067	LSM11	91	97.156	ENSOGAG00000009059	LSM11	100	97.156	Otolemur_garnettii
ENSCLAG00000017067	LSM11	91	61.468	ENSPSIG00000005234	LSM11	100	61.468	Pelodiscus_sinensis
ENSCLAG00000017067	LSM11	97	39.738	ENSPMGG00000020709	lsm11	57	39.301	Periophthalmus_magnuspinnatus
ENSCLAG00000017067	LSM11	91	92.958	ENSPCAG00000016360	LSM11	100	92.958	Procavia_capensis
ENSCLAG00000017067	LSM11	90	98.095	ENSTBEG00000000992	LSM11	100	98.095	Tupaia_belangeri