EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000017218 (Gene tree)
Gene ID: 102009705
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 19739 bases
Position: chrJH721873.1:33736124-33755862
Accession: 102009705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000025074	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000025319	-	4893	XM_005379599	ENSCLAP00000025074	223 (aa)	XP_005379656	UPI00038EF6F6

Gene Model

Click here to download ENSCLAG00000017218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000017218	-	83	30.319	ENSCLAG00000015536	RAB6A	88	30.319
ENSCLAG00000017218	-	62	38.621	ENSCLAG00000003133	RAB33B	63	38.621
ENSCLAG00000017218	-	73	35.503	ENSCLAG00000014766	RAB1A	81	35.503
ENSCLAG00000017218	-	69	31.013	ENSCLAG00000006603	-	78	31.013
ENSCLAG00000017218	-	69	36.478	ENSCLAG00000003207	RAB11B	72	36.478
ENSCLAG00000017218	-	70	32.075	ENSCLAG00000006992	RAB31	82	32.075
ENSCLAG00000017218	-	67	37.419	ENSCLAG00000007435	RAB11A	71	37.419
ENSCLAG00000017218	-	67	32.680	ENSCLAG00000002400	RAB2B	77	32.886
ENSCLAG00000017218	-	67	37.419	ENSCLAG00000015776	RAB1B	76	37.419
ENSCLAG00000017218	-	67	35.294	ENSCLAG00000016650	RAB5C	71	35.294
ENSCLAG00000017218	-	65	33.333	ENSCLAG00000008913	RAB37	69	33.333
ENSCLAG00000017218	-	70	37.654	ENSCLAG00000005031	RAB33A	67	37.654
ENSCLAG00000017218	-	65	30.000	ENSCLAG00000002057	MRAS	77	31.056
ENSCLAG00000017218	-	69	32.500	ENSCLAG00000000113	RAB39B	75	32.500
ENSCLAG00000017218	-	53	31.746	ENSCLAG00000004200	ARFRP1	62	31.746
ENSCLAG00000017218	-	76	34.463	ENSCLAG00000014030	RAB30	86	34.463
ENSCLAG00000017218	-	76	30.814	ENSCLAG00000013339	RAB35	86	30.814
ENSCLAG00000017218	-	74	34.483	ENSCLAG00000000494	RAB9A	86	34.483
ENSCLAG00000017218	-	67	34.641	ENSCLAG00000006053	-	71	34.641
ENSCLAG00000017218	-	67	34.641	ENSCLAG00000005708	RAB2A	72	34.641
ENSCLAG00000017218	-	69	30.380	ENSCLAG00000003784	RAB25	74	30.380
ENSCLAG00000017218	-	88	33.333	ENSCLAG00000009500	RAB14	89	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017218	-	99	89.593	ENSG00000144134	RABL2A	100	94.737	Homo_sapiens
ENSCLAG00000017218	-	99	89.593	ENSG00000079974	RABL2B	100	94.949	Homo_sapiens
ENSCLAG00000017218	-	93	78.261	ENSAPOG00000023708	rabl2	93	78.261	Acanthochromis_polyacanthus
ENSCLAG00000017218	-	99	87.111	ENSAMEG00000003173	-	99	87.111	Ailuropoda_melanoleuca
ENSCLAG00000017218	-	95	74.408	ENSACIG00000000670	rabl2	95	74.408	Amphilophus_citrinellus
ENSCLAG00000017218	-	93	78.744	ENSAOCG00000008069	rabl2	93	78.744	Amphiprion_ocellaris
ENSCLAG00000017218	-	93	78.261	ENSAPEG00000003164	rabl2	93	78.261	Amphiprion_percula
ENSCLAG00000017218	-	93	78.261	ENSATEG00000001111	rabl2	93	78.261	Anabas_testudineus
ENSCLAG00000017218	-	74	87.195	ENSACAG00000000418	-	93	87.195	Anolis_carolinensis
ENSCLAG00000017218	-	99	89.140	ENSANAG00000021001	-	97	89.140	Aotus_nancymaae
ENSCLAG00000017218	-	95	76.303	ENSACLG00000025632	rabl2	95	76.303	Astatotilapia_calliptera
ENSCLAG00000017218	-	95	79.621	ENSAMXG00000040611	rabl2	95	79.621	Astyanax_mexicanus
ENSCLAG00000017218	-	99	86.161	ENSBTAG00000004876	RABL2B	99	86.161	Bos_taurus
ENSCLAG00000017218	-	99	89.140	ENSCJAG00000018414	-	97	89.140	Callithrix_jacchus
ENSCLAG00000017218	-	99	89.593	ENSCAFG00020006938	-	99	89.593	Canis_lupus_dingo
ENSCLAG00000017218	-	98	84.141	ENSCHIG00000000591	-	98	84.141	Capra_hircus
ENSCLAG00000017218	-	99	88.235	ENSTSYG00000004323	-	97	88.235	Carlito_syrichta
ENSCLAG00000017218	-	99	94.595	ENSCPOG00000026899	-	99	94.595	Cavia_porcellus
ENSCLAG00000017218	-	99	90.498	ENSCCAG00000025944	-	97	90.498	Cebus_capucinus
ENSCLAG00000017218	-	99	88.235	ENSCATG00000034307	-	97	88.235	Cercocebus_atys
ENSCLAG00000017218	-	95	92.891	ENSCSAG00000004698	-	91	92.891	Chlorocebus_sabaeus
ENSCLAG00000017218	-	89	86.364	ENSCPBG00000011715	-	88	86.364	Chrysemys_picta_bellii
ENSCLAG00000017218	-	84	67.553	ENSCING00000004961	-	87	67.553	Ciona_intestinalis
ENSCLAG00000017218	-	81	70.000	ENSCSAVG00000006042	-	87	70.000	Ciona_savignyi
ENSCLAG00000017218	-	100	87.444	ENSCANG00000030879	-	97	87.444	Colobus_angolensis_palliatus
ENSCLAG00000017218	-	99	89.593	ENSCGRG00001021894	Rabl2	99	89.593	Cricetulus_griseus_chok1gshd
ENSCLAG00000017218	-	91	76.847	ENSCSEG00000005479	rabl2	99	73.094	Cynoglossus_semilaevis
ENSCLAG00000017218	-	91	78.818	ENSCVAG00000011432	rabl2	93	78.818	Cyprinodon_variegatus
ENSCLAG00000017218	-	91	78.325	ENSDARG00000063321	rabl2	93	78.325	Danio_rerio
ENSCLAG00000017218	-	96	92.093	ENSDNOG00000035151	-	97	92.093	Dasypus_novemcinctus
ENSCLAG00000017218	-	99	93.665	ENSDORG00000000003	Rabl2	99	93.665	Dipodomys_ordii
ENSCLAG00000017218	-	99	88.688	ENSEASG00005008239	-	99	88.688	Equus_asinus_asinus
ENSCLAG00000017218	-	99	88.688	ENSECAG00000026942	-	99	88.688	Equus_caballus
ENSCLAG00000017218	-	99	90.950	ENSFCAG00000033642	-	99	90.950	Felis_catus
ENSCLAG00000017218	-	98	94.977	ENSFDAG00000002113	-	98	94.977	Fukomys_damarensis
ENSCLAG00000017218	-	93	78.261	ENSFHEG00000015015	rabl2	78	78.261	Fundulus_heteroclitus
ENSCLAG00000017218	-	88	77.157	ENSGMOG00000018928	rabl2	100	77.157	Gadus_morhua
ENSCLAG00000017218	-	96	78.972	ENSGALG00000032458	RABL2B	96	78.972	Gallus_gallus
ENSCLAG00000017218	-	90	78.109	ENSGAFG00000005188	rabl2	100	73.543	Gambusia_affinis
ENSCLAG00000017218	-	93	75.845	ENSGACG00000012474	rabl2	94	75.845	Gasterosteus_aculeatus
ENSCLAG00000017218	-	95	76.303	ENSHBUG00000010964	rabl2	95	76.303	Haplochromis_burtoni
ENSCLAG00000017218	-	100	92.825	ENSHGLG00000005750	-	100	92.825	Heterocephalus_glaber_female
ENSCLAG00000017218	-	100	92.825	ENSHGLG00100016281	-	100	92.825	Heterocephalus_glaber_male
ENSCLAG00000017218	-	99	92.760	ENSSTOG00000002723	-	99	92.760	Ictidomys_tridecemlineatus
ENSCLAG00000017218	-	99	89.140	ENSJJAG00000010792	Rabl2	99	89.140	Jaculus_jaculus
ENSCLAG00000017218	-	93	78.744	ENSKMAG00000012723	rabl2	93	78.744	Kryptolebias_marmoratus
ENSCLAG00000017218	-	93	78.744	ENSLBEG00000003644	rabl2	93	78.744	Labrus_bergylta
ENSCLAG00000017218	-	92	81.951	ENSLACG00000003722	rabl2	92	81.951	Latimeria_chalumnae
ENSCLAG00000017218	-	99	77.477	ENSLOCG00000016767	rabl2	98	77.477	Lepisosteus_oculatus
ENSCLAG00000017218	-	99	89.593	ENSMFAG00000044775	-	97	89.593	Macaca_fascicularis
ENSCLAG00000017218	-	99	89.593	ENSMMUG00000022914	RABL2B	97	89.593	Macaca_mulatta
ENSCLAG00000017218	-	99	89.140	ENSMNEG00000028460	-	96	89.140	Macaca_nemestrina
ENSCLAG00000017218	-	99	88.235	ENSMLEG00000032621	-	96	88.235	Mandrillus_leucophaeus
ENSCLAG00000017218	-	93	77.778	ENSMAMG00000008168	rabl2	93	77.778	Mastacembelus_armatus
ENSCLAG00000017218	-	92	76.214	ENSMZEG00005019758	rabl2	95	76.214	Maylandia_zebra
ENSCLAG00000017218	-	99	88.688	ENSMAUG00000010955	Rabl2	99	88.688	Mesocricetus_auratus
ENSCLAG00000017218	-	99	92.760	ENSMICG00000031301	-	97	92.760	Microcebus_murinus
ENSCLAG00000017218	-	99	88.235	ENSMOCG00000002775	Rabl2	99	88.235	Microtus_ochrogaster
ENSCLAG00000017218	-	87	93.333	ENSMODG00000010838	-	89	93.333	Monodelphis_domestica
ENSCLAG00000017218	-	93	77.778	ENSMALG00000005944	rabl2	93	77.778	Monopterus_albus
ENSCLAG00000017218	-	99	85.973	MGP_CAROLIEiJ_G0020176	Rabl2	98	85.973	Mus_caroli
ENSCLAG00000017218	-	99	85.973	ENSMUSG00000022621	Rabl2	99	85.973	Mus_musculus
ENSCLAG00000017218	-	99	86.878	MGP_PahariEiJ_G0020181	Rabl2	99	86.878	Mus_pahari
ENSCLAG00000017218	-	99	85.520	MGP_SPRETEiJ_G0021073	Rabl2	99	85.520	Mus_spretus
ENSCLAG00000017218	-	99	89.593	ENSMPUG00000001806	-	99	89.593	Mustela_putorius_furo
ENSCLAG00000017218	-	98	86.301	ENSNGAG00000012843	Rabl2	95	86.301	Nannospalax_galili
ENSCLAG00000017218	-	95	76.303	ENSNBRG00000000489	rabl2	95	76.303	Neolamprologus_brichardi
ENSCLAG00000017218	-	99	90.045	ENSNLEG00000030435	-	96	90.045	Nomascus_leucogenys
ENSCLAG00000017218	-	100	95.067	ENSODEG00000015650	-	100	95.067	Octodon_degus
ENSCLAG00000017218	-	95	76.777	ENSONIG00000014885	rabl2	95	76.777	Oreochromis_niloticus
ENSCLAG00000017218	-	93	74.396	ENSORLG00000009874	rabl2	92	74.396	Oryzias_latipes
ENSCLAG00000017218	-	93	74.396	ENSORLG00020001721	rabl2	92	74.396	Oryzias_latipes_hni
ENSCLAG00000017218	-	93	74.396	ENSORLG00015014268	rabl2	92	74.396	Oryzias_latipes_hsok
ENSCLAG00000017218	-	93	76.812	ENSOMEG00000008576	rabl2	95	76.812	Oryzias_melastigma
ENSCLAG00000017218	-	99	93.213	ENSOGAG00000009123	-	97	93.213	Otolemur_garnettii
ENSCLAG00000017218	-	98	89.091	ENSPPRG00000014642	-	96	89.091	Panthera_pardus
ENSCLAG00000017218	-	99	90.950	ENSPTIG00000018747	-	99	90.950	Panthera_tigris_altaica
ENSCLAG00000017218	-	96	85.778	ENSPTRG00000014555	-	95	85.778	Pan_troglodytes
ENSCLAG00000017218	-	98	85.153	ENSPANG00000036121	-	96	85.153	Papio_anubis
ENSCLAG00000017218	-	91	79.902	ENSPKIG00000025372	rabl2	91	79.902	Paramormyrops_kingsleyae
ENSCLAG00000017218	-	89	87.879	ENSPSIG00000014041	-	88	87.879	Pelodiscus_sinensis
ENSCLAG00000017218	-	88	76.650	ENSPMGG00000012946	rabl2	96	76.650	Periophthalmus_magnuspinnatus
ENSCLAG00000017218	-	99	90.045	ENSPEMG00000024045	Rabl2	99	90.045	Peromyscus_maniculatus_bairdii
ENSCLAG00000017218	-	89	91.919	ENSPCIG00000012436	-	81	91.919	Phascolarctos_cinereus
ENSCLAG00000017218	-	95	76.995	ENSPFOG00000017960	rabl2	96	76.995	Poecilia_formosa
ENSCLAG00000017218	-	95	77.725	ENSPLAG00000015685	rabl2	96	77.725	Poecilia_latipinna
ENSCLAG00000017218	-	95	77.725	ENSPMEG00000004703	rabl2	96	77.725	Poecilia_mexicana
ENSCLAG00000017218	-	88	78.680	ENSPREG00000014761	rabl2	94	80.952	Poecilia_reticulata
ENSCLAG00000017218	-	99	90.045	ENSPPYG00000012000	-	97	90.045	Pongo_abelii
ENSCLAG00000017218	-	99	92.308	ENSPCOG00000024865	-	97	92.308	Propithecus_coquereli
ENSCLAG00000017218	-	99	83.691	ENSPVAG00000004539	-	98	83.691	Pteropus_vampyrus
ENSCLAG00000017218	-	95	76.303	ENSPNYG00000004845	rabl2	95	76.303	Pundamilia_nyererei
ENSCLAG00000017218	-	90	81.592	ENSPNAG00000024254	rabl2	99	77.027	Pygocentrus_nattereri
ENSCLAG00000017218	-	99	88.235	ENSRNOG00000013947	Rabl2	88	88.235	Rattus_norvegicus
ENSCLAG00000017218	-	100	88.341	ENSRBIG00000033607	-	97	88.341	Rhinopithecus_bieti
ENSCLAG00000017218	-	99	89.140	ENSRROG00000031130	-	97	89.140	Rhinopithecus_roxellana
ENSCLAG00000017218	-	99	90.950	ENSSBOG00000033266	-	97	90.950	Saimiri_boliviensis_boliviensis
ENSCLAG00000017218	-	91	78.431	ENSSFOG00015020738	rabl2	92	78.641	Scleropages_formosus
ENSCLAG00000017218	-	100	74.439	ENSSMAG00000004606	rabl2	100	74.439	Scophthalmus_maximus
ENSCLAG00000017218	-	92	78.537	ENSSDUG00000014765	rabl2	92	78.537	Seriola_dumerili
ENSCLAG00000017218	-	76	90.588	ENSSSCG00000025041	-	100	90.588	Sus_scrofa
ENSCLAG00000017218	-	88	79.695	ENSTGUG00000016028	-	95	79.695	Taeniopygia_guttata
ENSCLAG00000017218	-	93	78.261	ENSTRUG00000012454	rabl2	93	78.261	Takifugu_rubripes
ENSCLAG00000017218	-	93	77.778	ENSTNIG00000017951	rabl2	93	77.778	Tetraodon_nigroviridis
ENSCLAG00000017218	-	91	90.594	ENSUAMG00000015761	-	90	90.594	Ursus_americanus
ENSCLAG00000017218	-	99	89.593	ENSUMAG00000017116	-	99	89.593	Ursus_maritimus
ENSCLAG00000017218	-	99	88.688	ENSVVUG00000025761	-	99	88.688	Vulpes_vulpes
ENSCLAG00000017218	-	93	78.846	ENSXETG00000015712	rabl2b	92	78.846	Xenopus_tropicalis
ENSCLAG00000017218	-	91	78.922	ENSXMAG00000004569	rabl2	100	74.439	Xiphophorus_maculatus