EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000017230 (Gene tree)
Gene ID: 102007441
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 13116 bases
Position: chrJH721882.1:25793841-25806956
Accession: 102007441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000025089	RRM_1	PF00076.22	4.4e-30	1	3
ENSCLAP00000025089	RRM_1	PF00076.22	4.4e-30	2	3
ENSCLAP00000025089	RRM_1	PF00076.22	4.4e-30	3	3
ENSCLAP00000025088	RRM_1	PF00076.22	6e-30	1	3
ENSCLAP00000025088	RRM_1	PF00076.22	6e-30	2	3
ENSCLAP00000025088	RRM_1	PF00076.22	6e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000025334	RBM12-202	2778	-	ENSCLAP00000025089	925 (aa)	-	-
ENSCLAT00000025333	RBM12-201	3918	XM_013514123	ENSCLAP00000025088	972 (aa)	XP_013369577	UPI000698B577

Gene Model

Click here to download ENSCLAG00000017230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000017230	RBM12	57	71.264	ENSCLAG00000017617	RBM12B	54	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017230	RBM12	100	93.240	ENSG00000244462	RBM12	100	97.761	Homo_sapiens
ENSCLAG00000017230	RBM12	100	93.790	ENSAMEG00000019189	RBM12	100	95.254	Ailuropoda_melanoleuca
ENSCLAG00000017230	RBM12	100	76.420	ENSACAG00000006330	RBM12	98	76.206	Anolis_carolinensis
ENSCLAG00000017230	RBM12	100	93.985	ENSANAG00000032596	RBM12	98	94.307	Aotus_nancymaae
ENSCLAG00000017230	RBM12	100	92.197	ENSBTAG00000044015	RBM12	100	92.608	Bos_taurus
ENSCLAG00000017230	RBM12	100	94.606	ENSCAFG00000008256	RBM12	98	95.038	Canis_familiaris
ENSCLAG00000017230	RBM12	100	94.391	ENSCAFG00020005650	RBM12	100	94.606	Canis_lupus_dingo
ENSCLAG00000017230	RBM12	100	94.067	ENSCHIG00000024592	RBM12	100	94.498	Capra_hircus
ENSCLAG00000017230	RBM12	98	95.710	ENSTSYG00000030563	RBM12	98	93.730	Carlito_syrichta
ENSCLAG00000017230	RBM12	85	93.861	ENSCAPG00000006176	RBM12	96	93.373	Cavia_aperea
ENSCLAG00000017230	RBM12	100	93.687	ENSCPOG00000035170	RBM12	100	93.487	Cavia_porcellus
ENSCLAG00000017230	RBM12	96	92.672	ENSCCAG00000036056	-	98	92.672	Cebus_capucinus
ENSCLAG00000017230	RBM12	87	90.957	ENSCCAG00000035899	-	100	91.803	Cebus_capucinus
ENSCLAG00000017230	RBM12	100	93.348	ENSCATG00000030934	RBM12	98	93.348	Cercocebus_atys
ENSCLAG00000017230	RBM12	100	93.240	ENSCANG00000030552	RBM12	98	93.240	Colobus_angolensis_palliatus
ENSCLAG00000017230	RBM12	100	90.404	ENSCGRG00001021144	Rbm12	100	90.404	Cricetulus_griseus_chok1gshd
ENSCLAG00000017230	RBM12	100	90.404	ENSCGRG00000012719	Rbm12	100	90.404	Cricetulus_griseus_crigri
ENSCLAG00000017230	RBM12	100	85.729	ENSDORG00000000606	-	100	85.425	Dipodomys_ordii
ENSCLAG00000017230	RBM12	100	91.313	ENSDORG00000028509	-	100	93.355	Dipodomys_ordii
ENSCLAG00000017230	RBM12	56	66.412	ENSEBUG00000016806	rbm12	89	60.390	Eptatretus_burgeri
ENSCLAG00000017230	RBM12	100	94.080	ENSECAG00000021997	RBM12	100	94.510	Equus_caballus
ENSCLAG00000017230	RBM12	58	95.699	ENSEEUG00000008858	-	56	95.699	Erinaceus_europaeus
ENSCLAG00000017230	RBM12	100	73.297	ENSFALG00000012516	RBM12	50	93.370	Ficedula_albicollis
ENSCLAG00000017230	RBM12	100	95.064	ENSFDAG00000014663	RBM12	100	95.494	Fukomys_damarensis
ENSCLAG00000017230	RBM12	100	78.942	ENSGALG00000030253	RBM12	100	79.266	Gallus_gallus
ENSCLAG00000017230	RBM12	100	93.240	ENSGGOG00000028500	RBM12	98	93.240	Gorilla_gorilla
ENSCLAG00000017230	RBM12	100	95.923	ENSHGLG00000013208	RBM12	100	95.923	Heterocephalus_glaber_female
ENSCLAG00000017230	RBM12	90	98.433	ENSHGLG00100019158	RBM12	90	98.433	Heterocephalus_glaber_male
ENSCLAG00000017230	RBM12	100	91.763	ENSSTOG00000019739	RBM12	100	91.341	Ictidomys_tridecemlineatus
ENSCLAG00000017230	RBM12	100	93.003	ENSLAFG00000010341	RBM12	100	93.434	Loxodonta_africana
ENSCLAG00000017230	RBM12	100	93.348	ENSMFAG00000032583	RBM12	98	93.348	Macaca_fascicularis
ENSCLAG00000017230	RBM12	100	93.455	ENSMMUG00000020960	CPNE1	100	93.455	Macaca_mulatta
ENSCLAG00000017230	RBM12	100	93.455	ENSMNEG00000045365	RBM12	98	93.455	Macaca_nemestrina
ENSCLAG00000017230	RBM12	100	93.455	ENSMLEG00000032492	RBM12	98	93.455	Mandrillus_leucophaeus
ENSCLAG00000017230	RBM12	100	78.186	ENSMGAG00000001502	RBM12	100	79.322	Meleagris_gallopavo
ENSCLAG00000017230	RBM12	100	91.010	ENSMAUG00000012800	Rbm12	100	91.010	Mesocricetus_auratus
ENSCLAG00000017230	RBM12	100	94.054	ENSMICG00000032761	-	98	94.162	Microcebus_murinus
ENSCLAG00000017230	RBM12	100	81.584	ENSMICG00000029540	-	74	84.884	Microcebus_murinus
ENSCLAG00000017230	RBM12	100	89.648	ENSMOCG00000012950	Rbm12	100	92.514	Microtus_ochrogaster
ENSCLAG00000017230	RBM12	100	85.189	ENSMODG00000001591	RBM12	98	90.701	Monodelphis_domestica
ENSCLAG00000017230	RBM12	100	87.885	MGP_CAROLIEiJ_G0024551	Rbm12	100	91.226	Mus_caroli
ENSCLAG00000017230	RBM12	100	87.964	ENSMUSG00000089824	Rbm12	100	88.810	Mus_musculus
ENSCLAG00000017230	RBM12	100	88.779	MGP_PahariEiJ_G0025996	Rbm12	100	91.783	Mus_pahari
ENSCLAG00000017230	RBM12	100	86.759	MGP_SPRETEiJ_G0025473	Rbm12	100	88.922	Mus_spretus
ENSCLAG00000017230	RBM12	100	93.743	ENSMPUG00000017789	-	100	94.175	Mustela_putorius_furo
ENSCLAG00000017230	RBM12	100	93.972	ENSMLUG00000011217	RBM12	98	94.403	Myotis_lucifugus
ENSCLAG00000017230	RBM12	100	91.633	ENSNGAG00000015846	Rbm12	100	91.532	Nannospalax_galili
ENSCLAG00000017230	RBM12	100	93.133	ENSNLEG00000010268	RBM12	98	93.133	Nomascus_leucogenys
ENSCLAG00000017230	RBM12	100	84.649	ENSMEUG00000007621	RBM12	100	84.324	Notamacropus_eugenii
ENSCLAG00000017230	RBM12	100	91.161	ENSOPRG00000005687	RBM12	100	91.587	Ochotona_princeps
ENSCLAG00000017230	RBM12	100	94.058	ENSODEG00000013870	RBM12	100	89.318	Octodon_degus
ENSCLAG00000017230	RBM12	100	93.240	ENSPPAG00000040719	RBM12	98	93.240	Pan_paniscus
ENSCLAG00000017230	RBM12	100	93.240	ENSPTRG00000040708	-	98	93.240	Pan_troglodytes
ENSCLAG00000017230	RBM12	100	93.240	ENSPTRG00000013446	RBM12	98	93.240	Pan_troglodytes
ENSCLAG00000017230	RBM12	100	93.455	ENSPANG00000020003	CPNE1	98	93.455	Papio_anubis
ENSCLAG00000017230	RBM12	91	86.000	ENSPSIG00000007369	RBM12	98	86.000	Pelodiscus_sinensis
ENSCLAG00000017230	RBM12	100	89.920	ENSPEMG00000017769	Rbm12	100	93.371	Peromyscus_maniculatus_bairdii
ENSCLAG00000017230	RBM12	60	79.365	ENSPFOG00000023551	rbm12	98	78.873	Poecilia_formosa
ENSCLAG00000017230	RBM12	100	93.148	ENSPPYG00000010960	RBM12	100	93.469	Pongo_abelii
ENSCLAG00000017230	RBM12	99	93.497	ENSPCAG00000008653	RBM12	100	92.233	Procavia_capensis
ENSCLAG00000017230	RBM12	100	93.972	ENSPCOG00000023724	RBM12	98	94.295	Propithecus_coquereli
ENSCLAG00000017230	RBM12	100	89.538	ENSPVAG00000014937	RBM12	100	94.187	Pteropus_vampyrus
ENSCLAG00000017230	RBM12	76	92.319	ENSRNOG00000049913	LOC100910990	98	92.319	Rattus_norvegicus
ENSCLAG00000017230	RBM12	76	92.319	ENSRNOG00000019723	Rbm12	98	92.319	Rattus_norvegicus
ENSCLAG00000017230	RBM12	100	93.455	ENSRBIG00000042965	RBM12	98	93.455	Rhinopithecus_bieti
ENSCLAG00000017230	RBM12	100	93.455	ENSRROG00000037485	RBM12	98	93.455	Rhinopithecus_roxellana
ENSCLAG00000017230	RBM12	100	89.549	ENSSBOG00000027633	RBM12	98	94.092	Saimiri_boliviensis_boliviensis
ENSCLAG00000017230	RBM12	100	85.405	ENSSHAG00000018585	RBM12	100	90.701	Sarcophilus_harrisii
ENSCLAG00000017230	RBM12	100	94.433	ENSSSCG00000036156	RBM12	100	94.861	Sus_scrofa
ENSCLAG00000017230	RBM12	100	79.892	ENSTGUG00000003002	RBM12	100	79.135	Taeniopygia_guttata
ENSCLAG00000017230	RBM12	100	94.403	ENSTTRG00000017035	RBM12	100	94.833	Tursiops_truncatus
ENSCLAG00000017230	RBM12	97	96.285	ENSUAMG00000010430	RBM12	100	94.822	Ursus_americanus
ENSCLAG00000017230	RBM12	89	100.000	ENSVPAG00000003812	RBM12	89	100.000	Vicugna_pacos
ENSCLAG00000017230	RBM12	100	59.936	ENSXETG00000033541	RBM12	56	82.759	Xenopus_tropicalis