EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000017397 (Gene tree)
Gene ID: 102019333
Gene Symbol: -
Alias: -
Full Name: 28S ribosomal protein S18c%2C mitochondrial
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 435 bases
Position: chrJH722012.1:805661-806095
Accession: 102019333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000025323	Ribosomal_S18	PF01084.20	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000025571	-	435	XM_005412189	ENSCLAP00000025323	144 (aa)	XP_005412246	UPI00038ED42B

Gene Model

Click here to download ENSCLAG00000017397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000017397	-	100	97.945	ENSCLAG00000008205	-	100	97.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017397	-	100	85.417	ENSG00000163319	MRPS18C	100	85.417	Homo_sapiens
ENSCLAG00000017397	-	100	72.917	ENSAMEG00000004915	MRPS18C	100	72.917	Ailuropoda_melanoleuca
ENSCLAG00000017397	-	100	72.917	ENSANAG00000028055	-	100	72.917	Aotus_nancymaae
ENSCLAG00000017397	-	99	70.667	ENSANAG00000025323	-	95	70.667	Aotus_nancymaae
ENSCLAG00000017397	-	100	56.250	ENSBTAG00000049836	-	100	56.250	Bos_taurus
ENSCLAG00000017397	-	100	78.472	ENSBTAG00000018155	MRPS18C	100	78.472	Bos_taurus
ENSCLAG00000017397	-	100	82.639	ENSCJAG00000042247	MRPS18C	97	82.639	Callithrix_jacchus
ENSCLAG00000017397	-	100	77.778	ENSCAFG00020010491	MRPS18C	100	77.778	Canis_lupus_dingo
ENSCLAG00000017397	-	96	76.923	ENSCHIG00000004461	-	99	76.923	Capra_hircus
ENSCLAG00000017397	-	100	53.472	ENSCHIG00000016551	-	100	53.472	Capra_hircus
ENSCLAG00000017397	-	100	63.889	ENSCHIG00000018805	-	100	63.889	Capra_hircus
ENSCLAG00000017397	-	76	69.091	ENSCHIG00000019359	-	100	69.091	Capra_hircus
ENSCLAG00000017397	-	100	68.056	ENSCHIG00000022740	-	100	68.056	Capra_hircus
ENSCLAG00000017397	-	100	80.556	ENSTSYG00000012924	MRPS18C	100	80.556	Carlito_syrichta
ENSCLAG00000017397	-	100	86.806	ENSCPOG00000009198	MRPS18C	100	86.806	Cavia_porcellus
ENSCLAG00000017397	-	100	72.222	ENSCCAG00000028283	-	100	72.222	Cebus_capucinus
ENSCLAG00000017397	-	99	71.329	ENSCCAG00000025155	-	95	71.329	Cebus_capucinus
ENSCLAG00000017397	-	100	82.639	ENSCCAG00000026577	-	100	82.639	Cebus_capucinus
ENSCLAG00000017397	-	100	80.556	ENSCCAG00000019347	-	100	80.556	Cebus_capucinus
ENSCLAG00000017397	-	100	84.722	ENSCATG00000040697	MRPS18C	100	84.722	Cercocebus_atys
ENSCLAG00000017397	-	100	71.528	ENSCANG00000041165	-	100	71.528	Colobus_angolensis_palliatus
ENSCLAG00000017397	-	100	84.722	ENSCANG00000038907	MRPS18C	100	84.722	Colobus_angolensis_palliatus
ENSCLAG00000017397	-	99	64.085	ENSCANG00000037347	-	97	64.085	Colobus_angolensis_palliatus
ENSCLAG00000017397	-	100	81.250	ENSCGRG00001000103	Mrps18c	100	81.250	Cricetulus_griseus_chok1gshd
ENSCLAG00000017397	-	100	81.250	ENSCGRG00000002192	Mrps18c	100	81.250	Cricetulus_griseus_crigri
ENSCLAG00000017397	-	99	78.169	ENSDORG00000012749	Mrps18c	100	78.169	Dipodomys_ordii
ENSCLAG00000017397	-	100	52.083	ENSETEG00000012223	-	100	52.083	Echinops_telfairi
ENSCLAG00000017397	-	100	83.333	ENSEASG00005013234	MRPS18C	100	83.333	Equus_asinus_asinus
ENSCLAG00000017397	-	100	84.028	ENSECAG00000020387	MRPS18C	100	84.028	Equus_caballus
ENSCLAG00000017397	-	100	56.250	ENSEEUG00000003504	MRPS18C	99	56.250	Erinaceus_europaeus
ENSCLAG00000017397	-	100	79.861	ENSFCAG00000042464	MRPS18C	100	79.861	Felis_catus
ENSCLAG00000017397	-	100	77.083	ENSFDAG00000008778	-	100	77.083	Fukomys_damarensis
ENSCLAG00000017397	-	100	88.194	ENSFDAG00000000250	-	100	88.194	Fukomys_damarensis
ENSCLAG00000017397	-	100	72.917	ENSGGOG00000008603	MRPS18C	100	72.917	Gorilla_gorilla
ENSCLAG00000017397	-	100	58.333	ENSGGOG00000037903	-	100	58.333	Gorilla_gorilla
ENSCLAG00000017397	-	100	63.194	ENSGGOG00000040785	-	100	63.194	Gorilla_gorilla
ENSCLAG00000017397	-	100	86.986	ENSHGLG00000002953	-	100	86.986	Heterocephalus_glaber_female
ENSCLAG00000017397	-	100	79.861	ENSHGLG00000012671	-	98	79.861	Heterocephalus_glaber_female
ENSCLAG00000017397	-	100	84.722	ENSHGLG00000020134	-	100	84.722	Heterocephalus_glaber_female
ENSCLAG00000017397	-	100	86.986	ENSHGLG00100016235	-	100	86.986	Heterocephalus_glaber_male
ENSCLAG00000017397	-	100	79.861	ENSHGLG00100015568	-	98	79.861	Heterocephalus_glaber_male
ENSCLAG00000017397	-	100	84.722	ENSHGLG00100019678	-	100	84.722	Heterocephalus_glaber_male
ENSCLAG00000017397	-	100	84.028	ENSSTOG00000007989	MRPS18C	100	84.028	Ictidomys_tridecemlineatus
ENSCLAG00000017397	-	100	52.083	ENSJJAG00000022437	Mrps18c	100	52.083	Jaculus_jaculus
ENSCLAG00000017397	-	100	79.861	ENSLAFG00000001059	MRPS18C	100	79.861	Loxodonta_africana
ENSCLAG00000017397	-	100	68.750	ENSMFAG00000041276	-	100	68.750	Macaca_fascicularis
ENSCLAG00000017397	-	100	84.722	ENSMFAG00000003991	MRPS18C	100	84.722	Macaca_fascicularis
ENSCLAG00000017397	-	100	75.694	ENSMMUG00000048717	-	100	75.694	Macaca_mulatta
ENSCLAG00000017397	-	100	67.361	ENSMMUG00000015353	MRPS18C	100	67.361	Macaca_mulatta
ENSCLAG00000017397	-	100	75.000	ENSMMUG00000039146	-	100	75.000	Macaca_mulatta
ENSCLAG00000017397	-	100	84.722	ENSMNEG00000043663	MRPS18C	100	84.722	Macaca_nemestrina
ENSCLAG00000017397	-	100	65.278	ENSMNEG00000018700	-	100	65.278	Macaca_nemestrina
ENSCLAG00000017397	-	100	84.722	ENSMLEG00000038884	MRPS18C	100	84.722	Mandrillus_leucophaeus
ENSCLAG00000017397	-	100	64.583	ENSMICG00000037615	-	100	64.583	Microcebus_murinus
ENSCLAG00000017397	-	100	81.944	ENSMICG00000032609	-	100	81.944	Microcebus_murinus
ENSCLAG00000017397	-	100	78.472	ENSMOCG00000015591	-	100	78.472	Microtus_ochrogaster
ENSCLAG00000017397	-	100	77.778	ENSMOCG00000009898	-	100	77.778	Microtus_ochrogaster
ENSCLAG00000017397	-	97	71.831	ENSMODG00000020773	MRPS18C	99	71.831	Monodelphis_domestica
ENSCLAG00000017397	-	100	76.027	MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.027	Mus_caroli
ENSCLAG00000017397	-	100	77.397	ENSMUSG00000016833	Mrps18c	100	77.397	Mus_musculus
ENSCLAG00000017397	-	100	77.397	MGP_PahariEiJ_G0017236	Mrps18c	100	77.397	Mus_pahari
ENSCLAG00000017397	-	83	72.951	MGP_SPRETEiJ_G0028455	Mrps18c	93	72.951	Mus_spretus
ENSCLAG00000017397	-	100	79.167	ENSMLUG00000017057	MRPS18C	100	79.167	Myotis_lucifugus
ENSCLAG00000017397	-	86	85.484	ENSNGAG00000015980	Mrps18c	99	80.282	Nannospalax_galili
ENSCLAG00000017397	-	100	84.028	ENSNLEG00000009119	MRPS18C	100	84.028	Nomascus_leucogenys
ENSCLAG00000017397	-	100	78.472	ENSNLEG00000018188	-	100	78.472	Nomascus_leucogenys
ENSCLAG00000017397	-	69	72.727	ENSOPRG00000004113	MRPS18C	68	72.727	Ochotona_princeps
ENSCLAG00000017397	-	100	90.278	ENSODEG00000020349	-	100	90.278	Octodon_degus
ENSCLAG00000017397	-	100	88.356	ENSODEG00000007599	-	100	88.356	Octodon_degus
ENSCLAG00000017397	-	100	78.472	ENSOARG00000002770	MRPS18C	100	78.472	Ovis_aries
ENSCLAG00000017397	-	100	59.722	ENSPPAG00000037400	-	100	59.722	Pan_paniscus
ENSCLAG00000017397	-	100	85.417	ENSPPAG00000037122	MRPS18C	100	85.417	Pan_paniscus
ENSCLAG00000017397	-	100	79.167	ENSPPRG00000011089	MRPS18C	100	79.167	Panthera_pardus
ENSCLAG00000017397	-	100	79.167	ENSPTIG00000021242	MRPS18C	100	79.167	Panthera_tigris_altaica
ENSCLAG00000017397	-	100	85.417	ENSPTRG00000016233	MRPS18C	100	85.417	Pan_troglodytes
ENSCLAG00000017397	-	100	57.639	ENSPTRG00000047058	-	100	57.639	Pan_troglodytes
ENSCLAG00000017397	-	100	84.028	ENSPANG00000033931	MRPS18C	100	84.028	Papio_anubis
ENSCLAG00000017397	-	100	75.000	ENSPANG00000034202	-	100	75.000	Papio_anubis
ENSCLAG00000017397	-	100	79.167	ENSPEMG00000008390	Mrps18c	100	79.167	Peromyscus_maniculatus_bairdii
ENSCLAG00000017397	-	71	86.275	ENSPCIG00000019737	-	100	86.275	Phascolarctos_cinereus
ENSCLAG00000017397	-	97	71.429	ENSPCIG00000005376	-	99	71.429	Phascolarctos_cinereus
ENSCLAG00000017397	-	98	63.194	ENSPCIG00000000097	-	99	63.194	Phascolarctos_cinereus
ENSCLAG00000017397	-	100	86.111	ENSPPYG00000025867	MRPS18C	100	86.111	Pongo_abelii
ENSCLAG00000017397	-	99	80.420	ENSPPYG00000025835	-	100	80.420	Pongo_abelii
ENSCLAG00000017397	-	100	74.306	ENSPCAG00000004975	MRPS18C	100	74.306	Procavia_capensis
ENSCLAG00000017397	-	100	84.028	ENSPCOG00000017634	MRPS18C	100	84.028	Propithecus_coquereli
ENSCLAG00000017397	-	69	77.778	ENSPVAG00000006439	MRPS18C	100	77.778	Pteropus_vampyrus
ENSCLAG00000017397	-	100	73.288	ENSRNOG00000002178	Mrps18c	100	73.288	Rattus_norvegicus
ENSCLAG00000017397	-	100	84.722	ENSRBIG00000041685	MRPS18C	100	84.722	Rhinopithecus_bieti
ENSCLAG00000017397	-	100	74.306	ENSRBIG00000035023	-	100	74.306	Rhinopithecus_bieti
ENSCLAG00000017397	-	100	57.639	ENSRBIG00000031637	-	100	57.639	Rhinopithecus_bieti
ENSCLAG00000017397	-	100	57.639	ENSRROG00000030722	-	100	57.639	Rhinopithecus_roxellana
ENSCLAG00000017397	-	100	84.722	ENSRROG00000044334	MRPS18C	100	84.722	Rhinopithecus_roxellana
ENSCLAG00000017397	-	100	74.306	ENSRROG00000033834	-	100	74.306	Rhinopithecus_roxellana
ENSCLAG00000017397	-	100	83.333	ENSSBOG00000027568	-	100	83.333	Saimiri_boliviensis_boliviensis
ENSCLAG00000017397	-	96	71.739	ENSSBOG00000032292	-	99	71.739	Saimiri_boliviensis_boliviensis
ENSCLAG00000017397	-	100	63.889	ENSSBOG00000029234	-	100	63.889	Saimiri_boliviensis_boliviensis
ENSCLAG00000017397	-	99	74.825	ENSSBOG00000022205	-	92	74.825	Saimiri_boliviensis_boliviensis
ENSCLAG00000017397	-	97	72.727	ENSSHAG00000007084	MRPS18C	99	72.727	Sarcophilus_harrisii
ENSCLAG00000017397	-	100	82.639	ENSSSCG00000038042	MRPS18C	100	82.639	Sus_scrofa
ENSCLAG00000017397	-	100	80.556	ENSTBEG00000012505	MRPS18C	100	80.556	Tupaia_belangeri
ENSCLAG00000017397	-	100	82.639	ENSTTRG00000004897	MRPS18C	100	82.639	Tursiops_truncatus
ENSCLAG00000017397	-	100	82.639	ENSUAMG00000012878	MRPS18C	100	82.639	Ursus_americanus
ENSCLAG00000017397	-	100	82.639	ENSUMAG00000008829	MRPS18C	100	82.639	Ursus_maritimus
ENSCLAG00000017397	-	100	81.250	ENSVPAG00000011358	MRPS18C	100	81.250	Vicugna_pacos
ENSCLAG00000017397	-	100	77.778	ENSVVUG00000015672	MRPS18C	100	77.778	Vulpes_vulpes